RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.053e-36■■■■□ 20.5
SF3B1-206ENST00000462613 PPIGQ13427 754 aaKnown RBP eCLIP7.11□□□□□ -1.271e-23■□□□□ 10.6
SF3B1-206ENST00000462613 EIF3HO15372 352 aaKnown RBP eCLIP6.32□□□□□ -1.42e-18■■■■■ 28
SF3B1-206ENST00000462613 SF3A3Q12874 501 aaKnown RBP eCLIP5.89□□□□□ -1.473e-14■□□□□ 9.1
SF3B1-206ENST00000462613 SF3B4Q15427 424 aaKnown RBP eCLIP5.84□□□□□ -1.474e-12■■□□□ 11.9
SF3B1-206ENST00000462613 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.67□□□□□ -1.341e-11■□□□□ 8
SF3B1-206ENST00000462613 HLTFQ14527 1009 aaKnown RBP eCLIP6.32□□□□□ -1.41e-11■□□□□ 9.5
SF3B1-206ENST00000462613 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.84□□□□□ -1.473e-11■■■■□ 19.3
SF3B1-206ENST00000462613 FXR1P51114 621 aaKnown RBP eCLIP6.91□□□□□ -1.35e-11■■■■■ 30.3
SF3B1-206ENST00000462613 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.76□□□□□ -1.335e-9■□□□□ 10.2
SF3B1-206ENST00000462613 FXR2P51116 673 aaKnown RBP eCLIP7.15□□□□□ -1.264e-8■■□□□ 13.2
SF3B1-206ENST00000462613 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.88□□□□□ -1.315e-8■□□□□ 9.2
SF3B1-206ENST00000462613 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6□□□□□ -1.459e-8■■■□□ 16.8
SF3B1-206ENST00000462613 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.76□□□□□ -1.172e-7■□□□□ 9.3
SF3B1-206ENST00000462613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.39□□□□□ -1.557e-7■□□□□ 8.9
SF3B1-206ENST00000462613 KHSRPQ92945 711 aaKnown RBP eCLIP6.6□□□□□ -1.351e-6■□□□□ 9.5
SF3B1-206ENST00000462613 RPS3P23396 243 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■■□ 23.7
SF3B1-206ENST00000462613 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.691e-6■□□□□ 10.8
Retrieved 18 of 18 RNA–protein pairs in 13 ms