RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	15.17	■□□□□ 0.02	2e-6	■■■■■ 151.5
ABCA2-208	ENST00000459850	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.47	□□□□□ -0.41	3e-7	■■■■■ 117.5
ABCA2-208	ENST00000459850	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.16	□□□□□ -0.46	1e-13	■■■■■ 54.9
ABCA2-208	ENST00000459850	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.69	□□□□□ -0.7	8e-7	■■■■■ 53.3
ABCA2-208	ENST00000459850	AQR	O60306	1485 aa	Known RBP eCLIP	14.1	□□□□□ -0.15	3e-7	■■■■■ 50.6
ABCA2-208	ENST00000459850	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	6e-7	■■■■■ 39.5
ABCA2-208	ENST00000459850	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	14.27	□□□□□ -0.12	4e-7	■■■■■ 39.3
ABCA2-208	ENST00000459850	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	1e-9	■■■■■ 37.2
ABCA2-208	ENST00000459850	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.27	□□□□□ -0.61	8e-6	■■■■■ 36.9
ABCA2-208	ENST00000459850	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	8e-6	■■■■■ 32.8
ABCA2-208	ENST00000459850	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.66	□□□□□ -0.54	8e-7	■■■■■ 32.7
ABCA2-208	ENST00000459850	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.89	□□□□□ -0.35	8e-7	■■■■■ 30.6
ABCA2-208	ENST00000459850	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.24	□□□□□ -0.29	5e-7	■■■■■ 30.4
ABCA2-208	ENST00000459850	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.05	□□□□□ -0.48	4e-7	■■■■■ 29.1
ABCA2-208	ENST00000459850	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.51	□□□□□ -0.41	8e-7	■■■■■ 28.2
ABCA2-208	ENST00000459850	PTBP1	P26599	531 aa	Known RBP eCLIP	10.78	□□□□□ -0.68	2e-11	■■■■■ 27.6
ABCA2-208	ENST00000459850	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	2e-12	■■■■□ 26.6
ABCA2-208	ENST00000459850	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.07	□□□□□ -0.48	3e-8	■■■■□ 26.1
ABCA2-208	ENST00000459850	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.83	□□□□□ -0.52	3e-6	■■■■□ 25.7
ABCA2-208	ENST00000459850	PRPF4	O43172	522 aa	Known RBP eCLIP	13.1	□□□□□ -0.31	3e-7	■■■■□ 25.6
ABCA2-208	ENST00000459850	U2AF2	P26368	475 aa	Known RBP eCLIP	13.01	□□□□□ -0.33	8e-6	■■■■□ 25
ABCA2-208	ENST00000459850	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.16	□□□□□ -0.46	6e-7	■■■■□ 24.8
ABCA2-208	ENST00000459850	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	5e-6	■■■■□ 23.5
ABCA2-208	ENST00000459850	METAP2	P50579	478 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	7e-6	■■■■□ 21.8
ABCA2-208	ENST00000459850	PPIG	Q13427	754 aa	Known RBP eCLIP	11.93	□□□□□ -0.5	1e-6	■■■■□ 20.6
ABCA2-208	ENST00000459850	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.65	□□□□□ -0.54	4e-6	■■■■□ 19.9
ABCA2-208	ENST00000459850	DDX3X	O00571	662 aa	Known RBP eCLIP	12.21	□□□□□ -0.45	1e-11	■■■■□ 19.4
ABCA2-208	ENST00000459850	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.84	□□□□□ -0.51	4e-9	■■■■□ 19.3
ABCA2-208	ENST00000459850	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.38	□□□□□ -0.43	1e-7	■■■□□ 17.4
ABCA2-208	ENST00000459850	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.06	□□□□□ -0.32	4e-8	■■■□□ 17.1
ABCA2-208	ENST00000459850	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	7e-7	■■■□□ 17.1
ABCA2-208	ENST00000459850	YBX3	P16989	372 aa	Known RBP eCLIP	12.11	□□□□□ -0.47	1e-6	■■■□□ 15.1
ABCA2-208	ENST00000459850	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.91	□□□□□ -0.18	1e-6	■■■□□ 14.8
ABCA2-208	ENST00000459850	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	8e-6	■■■□□ 14.7
ABCA2-208	ENST00000459850	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	2e-15	■■□□□ 14.4
ABCA2-208	ENST00000459850	EIF3H	O15372	352 aa	Known RBP eCLIP	12.25	□□□□□ -0.45	2e-6	■■□□□ 13.9
ABCA2-208	ENST00000459850	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.9	□□□□□ -0.5	5e-6	■□□□□ 10.5
ABCA2-208	ENST00000459850	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	16.01	■□□□□ 0.15	1e-6	■□□□□ 9.5
ABCA2-208	ENST00000459850	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.95	□□□□□ -0.18	4e-7	■□□□□ 8.9
ABCA2-208	ENST00000459850	PABPN1	Q86U42	306 aa	Known RBP eCLIP	16.58	■□□□□ 0.24	7e-6	■□□□□ 8.8

Retrieved 40 of 40 RNA–protein pairs in 40.3 ms