RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 XRCC6P12956 609 aaKnown RBP eCLIP14.51□□□□□ -0.091e-69■□□□□ 8.2
DDX39B-214ENST00000458640 PTBP1P26599 531 aaKnown RBP eCLIP10.98□□□□□ -0.651e-69■■■■□ 20.2
DDX39B-214ENST00000458640 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.38□□□□□ -0.593e-66■□□□□ 9.6
DDX39B-214ENST00000458640 WDR43Q15061 677 aaKnown RBP eCLIP14.21□□□□□ -0.138e-58■□□□□ 9.7
DDX39B-214ENST00000458640 NIP7Q9Y221 180 aaKnown RBP eCLIP12.91□□□□□ -0.345e-52■■□□□ 13.4
DDX39B-214ENST00000458640 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.414e-35■■■□□ 18.4
DDX39B-214ENST00000458640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.15□□□□□ -0.461e-34■■□□□ 12.6
DDX39B-214ENST00000458640 TRA2AQ13595 282 aaKnown RBP eCLIP10.16□□□□□ -0.784e-34■■■□□ 17.2
DDX39B-214ENST00000458640 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.06□□□□□ -0.481e-30■■□□□ 13.8
DDX39B-214ENST00000458640 RBM15Q96T37 977 aaKnown RBP eCLIP11.69□□□□□ -0.541e-28■■□□□ 12.9
DDX39B-214ENST00000458640 SRSF1Q07955 248 aaKnown RBP eCLIP9.27□□□□□ -0.922e-26■□□□□ 8.3
DDX39B-214ENST00000458640 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.469e-25■■■□□ 16.8
DDX39B-214ENST00000458640 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.173e-23■■■■□ 23.3
DDX39B-214ENST00000458640 HNRNPKP61978 463 aaKnown RBP eCLIP10.58□□□□□ -0.724e-21■■□□□ 12.4
DDX39B-214ENST00000458640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.256e-20■□□□□ 9.3
DDX39B-214ENST00000458640 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.543e-19■■□□□ 11.8
DDX39B-214ENST00000458640 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.515e-19■■□□□ 13.7
DDX39B-214ENST00000458640 LARP4Q71RC2 724 aaKnown RBP eCLIP11.02□□□□□ -0.641e-17■□□□□ 10.7
DDX39B-214ENST00000458640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.32e-17■□□□□ 9.5
DDX39B-214ENST00000458640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.019e-16■■□□□ 11.4
DDX39B-214ENST00000458640 U2AF1Q01081 240 aaKnown RBP eCLIP14□□□□□ -0.177e-15■■■□□ 14.8
DDX39B-214ENST00000458640 ZNF622Q969S3 477 aaKnown RBP eCLIP13.84□□□□□ -0.194e-14■□□□□ 11.2
DDX39B-214ENST00000458640 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.224e-14■■■■□ 23
DDX39B-214ENST00000458640 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.44□□□□□ -0.423e-13■■□□□ 11.4
DDX39B-214ENST00000458640 PPIGQ13427 754 aaKnown RBP eCLIP10.96□□□□□ -0.669e-13■□□□□ 10.6
DDX39B-214ENST00000458640 RPS3P23396 243 aaKnown RBP eCLIP11□□□□□ -0.651e-12■■□□□ 13
DDX39B-214ENST00000458640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.91□□□□□ -0.664e-12■□□□□ 11.3
DDX39B-214ENST00000458640 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.595e-12■■■■□ 22.4
DDX39B-214ENST00000458640 ZC3H11AO75152 810 aaKnown RBP eCLIP11.57□□□□□ -0.565e-12■■□□□ 12.8
DDX39B-214ENST00000458640 AATFQ9NY61 560 aaKnown RBP eCLIP12.49□□□□□ -0.417e-11■■■■□ 20.8
DDX39B-214ENST00000458640 PUM1Q14671 1186 aaKnown RBP eCLIP10.89□□□□□ -0.677e-11■□□□□ 8.5
DDX39B-214ENST00000458640 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.769e-11■□□□□ 9.9
DDX39B-214ENST00000458640 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.76□□□□□ -0.373e-10■□□□□ 10.4
DDX39B-214ENST00000458640 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.83□□□□□ -0.845e-10■■■■■ 34.6
DDX39B-214ENST00000458640 TAF15Q92804 592 aaKnown RBP eCLIP9.56□□□□□ -0.887e-10■■□□□ 12.7
DDX39B-214ENST00000458640 HLTFQ14527 1009 aaKnown RBP eCLIP12.16□□□□□ -0.461e-9■□□□□ 10.3
DDX39B-214ENST00000458640 NOLC1Q14978 699 aaKnown RBP eCLIP13.76□□□□□ -0.211e-9■■■■■ 32.2
DDX39B-214ENST00000458640 ILF3Q12906 894 aaKnown RBP eCLIP10.68□□□□□ -0.71e-9■■■■□ 21
DDX39B-214ENST00000458640 TIA1P31483 386 aaKnown RBP eCLIP10.24□□□□□ -0.773e-9■■■■■ 33.2
DDX39B-214ENST00000458640 SSBP05455 408 aaKnown RBP eCLIP12.5□□□□□ -0.415e-9■■■■■ 31.2
DDX39B-214ENST00000458640 MATR3P43243 847 aaKnown RBP eCLIP12.21□□□□□ -0.466e-9■□□□□ 9.9
DDX39B-214ENST00000458640 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.388e-9■■■■□ 24.6
DDX39B-214ENST00000458640 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.491e-8■□□□□ 8.9
DDX39B-214ENST00000458640 SF3A3Q12874 501 aaKnown RBP eCLIP11.94□□□□□ -0.51e-8■■■□□ 19.1
DDX39B-214ENST00000458640 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.062e-8■■■■■ 31.7
DDX39B-214ENST00000458640 PCBP2Q15366 365 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■■■□□ 16.9
DDX39B-214ENST00000458640 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.413e-8■■■■□ 22.2
DDX39B-214ENST00000458640 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.247e-8■■■■□ 25.3
DDX39B-214ENST00000458640 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.541e-7■■■■□ 26
DDX39B-214ENST00000458640 RBM5P52756 815 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■□□□□ 11
DDX39B-214ENST00000458640 DDX42Q86XP3 938 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■□□□ 13.8
DDX39B-214ENST00000458640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.94□□□□□ -0.663e-7■■■□□ 15.3
DDX39B-214ENST00000458640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.375e-7■■■■■ 34
DDX39B-214ENST00000458640 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.286e-7■■■■■ 28.2
DDX39B-214ENST00000458640 EFTUD2Q15029 972 aaKnown RBP eCLIP11.66□□□□□ -0.546e-7■■■□□ 16.2
DDX39B-214ENST00000458640 RBM22Q9NW64 420 aaKnown RBP eCLIP10.84□□□□□ -0.677e-7■■■■■ 36.7
DDX39B-214ENST00000458640 PCBP1Q15365 356 aaKnown RBP eCLIP11.46□□□□□ -0.571e-6■■□□□ 14.4
DDX39B-214ENST00000458640 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■□□□□ 11.3
DDX39B-214ENST00000458640 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■■■■□ 20.7
DDX39B-214ENST00000458640 HNRNPA1P09651 372 aaKnown RBP eCLIP10.78□□□□□ -0.683e-6■□□□□ 11
DDX39B-214ENST00000458640 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.24□□□□□ -0.616e-6■□□□□ 9.8
DDX39B-214ENST00000458640 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.447e-6■■■■□ 23.2
Retrieved 62 of 62 RNA–protein pairs in 37.2 ms