RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.76■□□□□ 0.758e-7■■■■■ 148.9
PTPA-223ENST00000452489 UPF1Q92900 1129 aaKnown RBP eCLIP17.74■□□□□ 0.439e-17■■■■■ 91.2
PTPA-223ENST00000452489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.37■■□□□ 1.014e-10■■■■■ 77.9
PTPA-223ENST00000452489 AKAP1Q92667 903 aaKnown RBP eCLIP18.27■□□□□ 0.526e-19■■■■■ 60.8
PTPA-223ENST00000452489 SF3B1O75533 1304 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■■■■ 38.6
PTPA-223ENST00000452489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.42■□□□□ 0.864e-10■■■■■ 33.2
PTPA-223ENST00000452489 GTF2F1P35269 517 aaKnown RBP eCLIP23.06■■□□□ 1.286e-11■■■■■ 32.8
PTPA-223ENST00000452489 PCBP1Q15365 356 aaKnown RBP eCLIP18.17■□□□□ 0.54e-7■■■■□ 25.8
PTPA-223ENST00000452489 G3BP1Q13283 466 aaKnown RBP eCLIP20.97■□□□□ 0.952e-6■■■■□ 24.8
PTPA-223ENST00000452489 EWSR1Q01844 656 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■■□ 24.6
PTPA-223ENST00000452489 RPS3P23396 243 aaKnown RBP eCLIP18.28■□□□□ 0.524e-6■■■■□ 22.8
PTPA-223ENST00000452489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.46■□□□□ 0.552e-6■■■■□ 21.9
PTPA-223ENST00000452489 QKIQ96PU8 341 aaKnown RBP eCLIP18.59■□□□□ 0.574e-8■■■■□ 21.8
PTPA-223ENST00000452489 SF3B4Q15427 424 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■■□ 20.6
PTPA-223ENST00000452489 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.542e-7■■■■□ 20.4
PTPA-223ENST00000452489 RBFOX2O43251 390 aaKnown RBP eCLIP15.95■□□□□ 0.141e-5■■■■□ 19.7
PTPA-223ENST00000452489 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.23■□□□□ 0.832e-6■■■□□ 19.1
PTPA-223ENST00000452489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.82■□□□□ 0.762e-10■■■□□ 19
PTPA-223ENST00000452489 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.21■□□□□ 0.834e-6■■■□□ 18.8
PTPA-223ENST00000452489 ZC3H11AO75152 810 aaKnown RBP eCLIP19.29■□□□□ 0.687e-6■■■□□ 18.7
PTPA-223ENST00000452489 LARP4Q71RC2 724 aaKnown RBP eCLIP18.55■□□□□ 0.561e-6■■■□□ 18.7
PTPA-223ENST00000452489 FXR2P51116 673 aaKnown RBP eCLIP19.67■□□□□ 0.744e-6■■■□□ 18.2
PTPA-223ENST00000452489 PABPC4Q13310 644 aaKnown RBP eCLIP20.09■□□□□ 0.813e-7■■■□□ 17.6
PTPA-223ENST00000452489 EFTUD2Q15029 972 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■■■□□ 15.7
PTPA-223ENST00000452489 PRPF4O43172 522 aaKnown RBP eCLIP19.75■□□□□ 0.752e-7■■■□□ 15.4
PTPA-223ENST00000452489 PTBP1P26599 531 aaKnown RBP eCLIP17.77■□□□□ 0.444e-7■■■□□ 15.4
PTPA-223ENST00000452489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.05□□□□□ -0.324e-6■■■□□ 15.2
PTPA-223ENST00000452489 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.82■□□□□ 0.62e-7■■□□□ 14.3
PTPA-223ENST00000452489 HNRNPMP52272 730 aaKnown RBP eCLIP22.58■■□□□ 1.212e-7■■□□□ 14.1
PTPA-223ENST00000452489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.74■□□□□ 0.912e-15■■□□□ 13.6
PTPA-223ENST00000452489 NKRFO15226 690 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■■□□□ 12.4
PTPA-223ENST00000452489 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.931e-6■■□□□ 12
PTPA-223ENST00000452489 DDX6P26196 483 aaKnown RBP eCLIP17.4■□□□□ 0.383e-10■■□□□ 12
PTPA-223ENST00000452489 PCBP2Q15366 365 aaKnown RBP eCLIP17.78■□□□□ 0.444e-6■■□□□ 11.8
PTPA-223ENST00000452489 YBX3P16989 372 aaKnown RBP eCLIP18.95■□□□□ 0.629e-8■□□□□ 11.1
PTPA-223ENST00000452489 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.45■□□□□ 0.543e-8■□□□□ 9.4
PTPA-223ENST00000452489 METAP2P50579 478 aaKnown RBP eCLIP20.68■□□□□ 0.95e-6■□□□□ 8.3
Retrieved 37 of 37 RNA–protein pairs in 18.6 ms