RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.36■□□□□ 0.057e-9■■■■■ 72.6
RAB11FIP3-204ENST00000449879 SF3B4Q15427 424 aaKnown RBP eCLIP15.14■□□□□ 0.012e-7■■■■■ 66
RAB11FIP3-204ENST00000449879 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.57■□□□□ 0.43e-6■■■■■ 52.9
RAB11FIP3-204ENST00000449879 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.42e-11■■■■■ 39
RAB11FIP3-204ENST00000449879 FMR1Q06787 632 aaKnown RBP eCLIP21.44■■□□□ 1.021e-9■■■■■ 34
RAB11FIP3-204ENST00000449879 EFTUD2Q15029 972 aaKnown RBP eCLIP15.45■□□□□ 0.063e-8■■■■■ 33.6
RAB11FIP3-204ENST00000449879 PABPN1Q86U42 306 aaKnown RBP eCLIP34.49■■■■□ 3.111e-8■■■■■ 32.8
RAB11FIP3-204ENST00000449879 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.03■□□□□ 0.164e-8■■■■■ 30.9
RAB11FIP3-204ENST00000449879 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.64■□□□□ 0.257e-8■■■■■ 29.7
RAB11FIP3-204ENST00000449879 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■■■ 28.8
RAB11FIP3-204ENST00000449879 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.233e-16■■■■□ 25.3
RAB11FIP3-204ENST00000449879 TIA1P31483 386 aaKnown RBP eCLIP15.04■□□□□ -09e-7■■■■□ 22.9
RAB11FIP3-204ENST00000449879 PRPF4O43172 522 aaKnown RBP eCLIP15.76■□□□□ 0.117e-8■■■■□ 21.4
RAB11FIP3-204ENST00000449879 CSTF2P33240 577 aaKnown RBP eCLIP16.45■□□□□ 0.222e-17■■■■□ 19.4
RAB11FIP3-204ENST00000449879 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.68■□□□□ 0.261e-6■■■■□ 19.3
RAB11FIP3-204ENST00000449879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.66■□□□□ 0.747e-6■■■□□ 18.9
RAB11FIP3-204ENST00000449879 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.43□□□□□ -0.11e-7■■■□□ 17.5
RAB11FIP3-204ENST00000449879 HNRNPMP52272 730 aaKnown RBP eCLIP26.66■■□□□ 1.868e-7■■■□□ 16.5
RAB11FIP3-204ENST00000449879 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■□□ 15.1
RAB11FIP3-204ENST00000449879 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.72■□□□□ 0.114e-8■■■□□ 14.8
RAB11FIP3-204ENST00000449879 SF3A3Q12874 501 aaKnown RBP eCLIP14.54□□□□□ -0.083e-8■■■□□ 14.6
RAB11FIP3-204ENST00000449879 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.41e-6■■□□□ 14.5
RAB11FIP3-204ENST00000449879 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.23■□□□□ 0.513e-7■■□□□ 13.3
RAB11FIP3-204ENST00000449879 HNRNPLP14866 589 aaKnown RBP eCLIP17.53■□□□□ 0.42e-8■■□□□ 13.1
RAB11FIP3-204ENST00000449879 NCBP2P52298 156 aaKnown RBP eCLIP15.01□□□□□ -0.013e-8■■□□□ 12.6
RAB11FIP3-204ENST00000449879 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.511e-6■■□□□ 12.5
RAB11FIP3-204ENST00000449879 SMNDC1O75940 238 aaKnown RBP eCLIP14.99□□□□□ -0.012e-9■■□□□ 12.2
RAB11FIP3-204ENST00000449879 FUSP35637 526 aaKnown RBP eCLIP11.31□□□□□ -0.62e-8■■□□□ 12.1
RAB11FIP3-204ENST00000449879 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.03■□□□□ 0.321e-8■■□□□ 11.9
RAB11FIP3-204ENST00000449879 XRCC6P12956 609 aaKnown RBP eCLIP18.4■□□□□ 0.545e-7■■□□□ 11.9
RAB11FIP3-204ENST00000449879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.84■■□□□ 1.739e-8■■□□□ 11.7
RAB11FIP3-204ENST00000449879 RBM5P52756 815 aaKnown RBP eCLIP20.9■□□□□ 0.941e-7■■□□□ 11.6
RAB11FIP3-204ENST00000449879 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■□□□ 11.5
RAB11FIP3-204ENST00000449879 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.38■□□□□ 0.855e-6■■□□□ 11.5
RAB11FIP3-204ENST00000449879 ILF3Q12906 894 aaKnown RBP eCLIP16.56■□□□□ 0.244e-7■□□□□ 11.3
RAB11FIP3-204ENST00000449879 PPIGQ13427 754 aaKnown RBP eCLIP19.46■□□□□ 0.712e-8■□□□□ 11.1
RAB11FIP3-204ENST00000449879 PCBP2Q15366 365 aaKnown RBP eCLIP15.26■□□□□ 0.033e-13■□□□□ 11
RAB11FIP3-204ENST00000449879 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.77□□□□□ -0.058e-7■□□□□ 10.8
RAB11FIP3-204ENST00000449879 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.58■□□□□ 0.081e-6■□□□□ 10.6
RAB11FIP3-204ENST00000449879 CDC40O60508 579 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■□□□□ 10.4
RAB11FIP3-204ENST00000449879 NONOQ15233 471 aaKnown RBP eCLIP18.65■□□□□ 0.583e-6■□□□□ 9.9
RAB11FIP3-204ENST00000449879 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.1■□□□□ 0.818e-8■□□□□ 9.7
RAB11FIP3-204ENST00000449879 MATR3P43243 847 aaKnown RBP eCLIP18.12■□□□□ 0.493e-8■□□□□ 9.7
RAB11FIP3-204ENST00000449879 U2AF1Q01081 240 aaKnown RBP eCLIP22.19■■□□□ 1.142e-6■□□□□ 9
RAB11FIP3-204ENST00000449879 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.28■□□□□ 0.043e-7■□□□□ 8.8
RAB11FIP3-204ENST00000449879 SFPQP23246 707 aaKnown RBP eCLIP18.59■□□□□ 0.576e-6■□□□□ 8.7
RAB11FIP3-204ENST00000449879 NKRFO15226 690 aaKnown RBP eCLIP19.37■□□□□ 0.695e-6■□□□□ 8.5
RAB11FIP3-204ENST00000449879 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.763e-6■□□□□ 8.3
RAB11FIP3-204ENST00000449879 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.482e-10■□□□□ 8.1
RAB11FIP3-204ENST00000449879 KHSRPQ92945 711 aaKnown RBP eCLIP18.83■□□□□ 0.61e-6■□□□□ 8
Retrieved 50 of 50 RNA–protein pairs in 36.4 ms