RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 NISCHQ9Y2I1 1504 aa31.21■■■□□ 2.59
PRPF40A-203ENST00000448428 CCDC180Q9P1Z9 1646 aa27.79■■■□□ 2.04
PRPF40A-203ENST00000448428 ABCC9O60706 1549 aa27.38■■□□□ 1.97
PRPF40A-203ENST00000448428 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
PRPF40A-203ENST00000448428 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
PRPF40A-203ENST00000448428 NACADO15069 1562 aa26.18■■□□□ 1.78
PRPF40A-203ENST00000448428 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
PRPF40A-203ENST00000448428 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
PRPF40A-203ENST00000448428 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
PRPF40A-203ENST00000448428 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
PRPF40A-203ENST00000448428 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.69
PRPF40A-203ENST00000448428 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
PRPF40A-203ENST00000448428 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
PRPF40A-203ENST00000448428 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
PRPF40A-203ENST00000448428 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
PRPF40A-203ENST00000448428 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
PRPF40A-203ENST00000448428 CC2D2AQ9P2K1 1620 aa24.76■■□□□ 1.55
PRPF40A-203ENST00000448428 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
PRPF40A-203ENST00000448428 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
PRPF40A-203ENST00000448428 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
PRPF40A-203ENST00000448428 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
PRPF40A-203ENST00000448428 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
PRPF40A-203ENST00000448428 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
PRPF40A-203ENST00000448428 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
PRPF40A-203ENST00000448428 HMGXB3Q12766 1538 aa24■■□□□ 1.43
PRPF40A-203ENST00000448428 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
PRPF40A-203ENST00000448428 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
PRPF40A-203ENST00000448428 WIZO95785 1651 aa23.82■■□□□ 1.4
PRPF40A-203ENST00000448428 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
PRPF40A-203ENST00000448428 NESP48681 1621 aa23.66■■□□□ 1.38
PRPF40A-203ENST00000448428 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
PRPF40A-203ENST00000448428 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
PRPF40A-203ENST00000448428 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
PRPF40A-203ENST00000448428 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
PRPF40A-203ENST00000448428 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
PRPF40A-203ENST00000448428 CUX2O14529 1486 aa23.38■■□□□ 1.33
PRPF40A-203ENST00000448428 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
PRPF40A-203ENST00000448428 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
PRPF40A-203ENST00000448428 CFTRP13569 1480 aa23.28■■□□□ 1.32
PRPF40A-203ENST00000448428 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
PRPF40A-203ENST00000448428 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
PRPF40A-203ENST00000448428 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
PRPF40A-203ENST00000448428 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
PRPF40A-203ENST00000448428 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
PRPF40A-203ENST00000448428 WDR62O43379 1518 aa23.08■■□□□ 1.29
PRPF40A-203ENST00000448428 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
PRPF40A-203ENST00000448428 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
PRPF40A-203ENST00000448428 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
PRPF40A-203ENST00000448428 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
PRPF40A-203ENST00000448428 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
PRPF40A-203ENST00000448428 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
PRPF40A-203ENST00000448428 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
PRPF40A-203ENST00000448428 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
PRPF40A-203ENST00000448428 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
PRPF40A-203ENST00000448428 CUX1P39880 1505 aa22.57■■□□□ 1.2
PRPF40A-203ENST00000448428 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
PRPF40A-203ENST00000448428 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
PRPF40A-203ENST00000448428 SOGA1O94964 1423 aa22.52■■□□□ 1.2
PRPF40A-203ENST00000448428 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
PRPF40A-203ENST00000448428 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
PRPF40A-203ENST00000448428 AQRO60306 1485 aaKnown RBP eCLIP22.48■■□□□ 1.199e-10■■■■■ 42.7
PRPF40A-203ENST00000448428 OSCARQ8IYS5 282 aa22.45■■□□□ 1.18
PRPF40A-203ENST00000448428 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
PRPF40A-203ENST00000448428 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
PRPF40A-203ENST00000448428 WDR97A6NE52 1622 aa22.34■■□□□ 1.17
PRPF40A-203ENST00000448428 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
PRPF40A-203ENST00000448428 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
PRPF40A-203ENST00000448428 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
PRPF40A-203ENST00000448428 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
PRPF40A-203ENST00000448428 CHD1O14646 1710 aa22.28■■□□□ 1.16
PRPF40A-203ENST00000448428 FBLN2P98095 1184 aa22.26■■□□□ 1.15
PRPF40A-203ENST00000448428 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
PRPF40A-203ENST00000448428 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
PRPF40A-203ENST00000448428 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
PRPF40A-203ENST00000448428 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
PRPF40A-203ENST00000448428 PBRM1Q86U86 1689 aa22.2■■□□□ 1.15
PRPF40A-203ENST00000448428 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
PRPF40A-203ENST00000448428 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
PRPF40A-203ENST00000448428 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
PRPF40A-203ENST00000448428 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
PRPF40A-203ENST00000448428 RIMBP3CA6NJZ7 1639 aa22.08■■□□□ 1.13
PRPF40A-203ENST00000448428 RIMBP3BA6NNM3 1639 aa22.08■■□□□ 1.13
PRPF40A-203ENST00000448428 RIMBP3Q9UFD9 1639 aa22.08■■□□□ 1.13
PRPF40A-203ENST00000448428 ARHGEF11O15085 1522 aa22.04■■□□□ 1.12
PRPF40A-203ENST00000448428 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
PRPF40A-203ENST00000448428 CLASP1Q7Z460 1538 aa22■■□□□ 1.11
PRPF40A-203ENST00000448428 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
PRPF40A-203ENST00000448428 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
PRPF40A-203ENST00000448428 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
PRPF40A-203ENST00000448428 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
PRPF40A-203ENST00000448428 CYB5RLQ6IPT4 315 aa21.9■■□□□ 1.1
PRPF40A-203ENST00000448428 IGF1RP08069 1367 aa21.87■■□□□ 1.09
PRPF40A-203ENST00000448428 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
PRPF40A-203ENST00000448428 NUP160Q12769 1436 aa21.87■■□□□ 1.09
PRPF40A-203ENST00000448428 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
PRPF40A-203ENST00000448428 CUL7Q14999 1698 aa21.77■■□□□ 1.08
PRPF40A-203ENST00000448428 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
PRPF40A-203ENST00000448428 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
PRPF40A-203ENST00000448428 ERCC6L2Q5T890 1561 aa21.72■■□□□ 1.07
PRPF40A-203ENST00000448428 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms