RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 SMNDC1O75940 238 aaKnown RBP eCLIP6.51□□□□□ -1.371e-63■■■■■ 81.3
PUM1-207ENST00000440538 NIP7Q9Y221 180 aaKnown RBP eCLIP7.82□□□□□ -1.162e-60■■■■■ 52.7
PUM1-207ENST00000440538 TRA2AQ13595 282 aaKnown RBP eCLIP5.78□□□□□ -1.482e-46■□□□□ 8.6
PUM1-207ENST00000440538 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.8□□□□□ -1.482e-42■■■■■ 50.1
PUM1-207ENST00000440538 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.26□□□□□ -1.411e-41■■■■■ 39.4
PUM1-207ENST00000440538 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.25□□□□□ -1.251e-31■■■■□ 21.7
PUM1-207ENST00000440538 XRCC6P12956 609 aaKnown RBP eCLIP7.75□□□□□ -1.172e-23■■■■□ 23.7
PUM1-207ENST00000440538 NOLC1Q14978 699 aaKnown RBP eCLIP7.32□□□□□ -1.241e-19■■■■■ 85.7
PUM1-207ENST00000440538 PCBP1Q15365 356 aaKnown RBP eCLIP6.59□□□□□ -1.352e-16■■■□□ 16.4
PUM1-207ENST00000440538 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.41e-15■■■■□ 22.2
PUM1-207ENST00000440538 PABPC4Q13310 644 aaKnown RBP eCLIP7.07□□□□□ -1.283e-15■■■□□ 18.5
PUM1-207ENST00000440538 FUBP3Q96I24 572 aaKnown RBP eCLIP6.45□□□□□ -1.385e-15■■□□□ 12.7
PUM1-207ENST00000440538 DDX6P26196 483 aaKnown RBP eCLIP6.31□□□□□ -1.41e-12■□□□□ 8.5
PUM1-207ENST00000440538 FMR1Q06787 632 aaKnown RBP eCLIP7.4□□□□□ -1.231e-12■■■□□ 16.5
PUM1-207ENST00000440538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.21□□□□□ -1.261e-12■□□□□ 9.3
PUM1-207ENST00000440538 DDX3XO00571 662 aaKnown RBP eCLIP6.58□□□□□ -1.364e-11■□□□□ 10.2
PUM1-207ENST00000440538 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.17□□□□□ -1.426e-11■■■■■ 44.5
PUM1-207ENST00000440538 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.781e-10■□□□□ 9.9
PUM1-207ENST00000440538 DKC1O60832 514 aaKnown RBP eCLIP6.83□□□□□ -1.324e-10■■■■■ 60.7
PUM1-207ENST00000440538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.91□□□□□ -1.148e-10■□□□□ 11.2
PUM1-207ENST00000440538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.94□□□□□ -0.981e-9■■■□□ 15.4
PUM1-207ENST00000440538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.77□□□□□ -1.332e-9■■■□□ 17.4
PUM1-207ENST00000440538 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.252e-9■■■■□ 22.9
PUM1-207ENST00000440538 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.026e-9■■■■■ 29.6
PUM1-207ENST00000440538 YBX3P16989 372 aaKnown RBP eCLIP7.49□□□□□ -1.212e-8■■□□□ 12.2
PUM1-207ENST00000440538 U2AF1Q01081 240 aaKnown RBP eCLIP8.33□□□□□ -1.082e-8■□□□□ 9.5
PUM1-207ENST00000440538 SRSF1Q07955 248 aaKnown RBP eCLIP5.33□□□□□ -1.563e-8■■■■□ 24.5
PUM1-207ENST00000440538 ZNF622Q969S3 477 aaKnown RBP eCLIP7.74□□□□□ -1.173e-8■■□□□ 11.6
PUM1-207ENST00000440538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.73□□□□□ -1.333e-8■■■■□ 20.2
PUM1-207ENST00000440538 NCBP2P52298 156 aaKnown RBP eCLIP5.87□□□□□ -1.474e-8■□□□□ 9.2
PUM1-207ENST00000440538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.57□□□□□ -1.366e-8■■■■□ 19.3
PUM1-207ENST00000440538 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.25□□□□□ -1.418e-8■■□□□ 13
PUM1-207ENST00000440538 PTBP1P26599 531 aaKnown RBP eCLIP5.56□□□□□ -1.521e-7■■■□□ 17
PUM1-207ENST00000440538 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.341e-7■■□□□ 12.9
PUM1-207ENST00000440538 LSM11P83369 360 aaKnown RBP eCLIP5.76□□□□□ -1.491e-7■■■□□ 18.3
PUM1-207ENST00000440538 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.391e-7■■□□□ 14.4
PUM1-207ENST00000440538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.78□□□□□ -1.481e-7■□□□□ 10.6
PUM1-207ENST00000440538 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.032e-7■□□□□ 10.7
PUM1-207ENST00000440538 HNRNPMP52272 730 aaKnown RBP eCLIP9.37□□□□□ -0.912e-7■■■■□ 20.6
PUM1-207ENST00000440538 AARSP49588 968 aaKnown RBP eCLIP6.74□□□□□ -1.332e-7■■■□□ 17.5
PUM1-207ENST00000440538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.01□□□□□ -1.293e-7■□□□□ 10.8
PUM1-207ENST00000440538 PCBP2Q15366 365 aaKnown RBP eCLIP5.93□□□□□ -1.463e-7■■■■■ 49.7
PUM1-207ENST00000440538 RBFOX2O43251 390 aaKnown RBP eCLIP5.09□□□□□ -1.63e-7■■□□□ 12.4
PUM1-207ENST00000440538 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.3□□□□□ -1.563e-7■■■■□ 21.2
PUM1-207ENST00000440538 SSBP05455 408 aaKnown RBP eCLIP7.08□□□□□ -1.283e-7■□□□□ 8.1
PUM1-207ENST00000440538 ILF3Q12906 894 aaKnown RBP eCLIP6.09□□□□□ -1.434e-7■■■■□ 19.8
PUM1-207ENST00000440538 KHSRPQ92945 711 aaKnown RBP eCLIP6.56□□□□□ -1.365e-7■■□□□ 13.6
PUM1-207ENST00000440538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.36□□□□□ -1.555e-7■■■■■ 28.7
PUM1-207ENST00000440538 TARDBPQ13148 414 aaKnown RBP eCLIP5.92□□□□□ -1.466e-7■■■■■ 28.1
PUM1-207ENST00000440538 PPIGQ13427 754 aaKnown RBP eCLIP6.64□□□□□ -1.356e-7■■□□□ 11.5
PUM1-207ENST00000440538 U2AF2P26368 475 aaKnown RBP eCLIP7.32□□□□□ -1.246e-7■■■□□ 14.6
PUM1-207ENST00000440538 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.87e-7■■■■■ 33.4
PUM1-207ENST00000440538 G3BP1Q13283 466 aaKnown RBP eCLIP7.7□□□□□ -1.187e-7■■■□□ 14.9
PUM1-207ENST00000440538 SF3A3Q12874 501 aaKnown RBP eCLIP6.77□□□□□ -1.337e-7■■□□□ 12.6
PUM1-207ENST00000440538 SF3B4Q15427 424 aaKnown RBP eCLIP6.06□□□□□ -1.447e-7■■■■□ 23.7
PUM1-207ENST00000440538 BCCIPQ9P287 314 aaKnown RBP eCLIP6.69□□□□□ -1.348e-7■■■■□ 21.9
PUM1-207ENST00000440538 QKIQ96PU8 341 aaKnown RBP eCLIP6.29□□□□□ -1.49e-7■■■□□ 18.3
PUM1-207ENST00000440538 NIPBLQ6KC79 2804 aaeCLIP5.16□□□□□ -1.581e-6■■■□□ 16.1
PUM1-207ENST00000440538 AATFQ9NY61 560 aaKnown RBP eCLIP7.5□□□□□ -1.211e-6■■■■■ 36.6
PUM1-207ENST00000440538 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.721e-6■■□□□ 12.3
PUM1-207ENST00000440538 TIA1P31483 386 aaKnown RBP eCLIP5.87□□□□□ -1.471e-6■■■□□ 17.7
PUM1-207ENST00000440538 SF3B1O75533 1304 aaKnown RBP eCLIP6.58□□□□□ -1.361e-6■■■■■ 33.2
PUM1-207ENST00000440538 RBM22Q9NW64 420 aaKnown RBP eCLIP6.36□□□□□ -1.391e-6■■■■□ 21.8
PUM1-207ENST00000440538 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.46□□□□□ -1.211e-6■■□□□ 14
PUM1-207ENST00000440538 MATR3P43243 847 aaKnown RBP eCLIP6.92□□□□□ -1.31e-6■■■□□ 14.6
PUM1-207ENST00000440538 EFTUD2Q15029 972 aaKnown RBP eCLIP6.38□□□□□ -1.391e-6■■■□□ 16.1
PUM1-207ENST00000440538 EIF3HO15372 352 aaKnown RBP eCLIP6.73□□□□□ -1.331e-6■■■■□ 22.3
PUM1-207ENST00000440538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.38□□□□□ -1.232e-6■■□□□ 13.3
PUM1-207ENST00000440538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.57□□□□□ -1.042e-6■■□□□ 13.8
PUM1-207ENST00000440538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.24□□□□□ -1.412e-6■■□□□ 12.3
PUM1-207ENST00000440538 GPKOWQ92917 476 aaPredicted RBP eCLIP7.24□□□□□ -1.252e-6■■■■□ 23.3
PUM1-207ENST00000440538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■□□□□ 10.4
PUM1-207ENST00000440538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■■■■■ 48.2
PUM1-207ENST00000440538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.72□□□□□ -1.332e-6■■■■□ 21
PUM1-207ENST00000440538 HNRNPCP07910 306 aaKnown RBP eCLIP6.25□□□□□ -1.412e-6■■□□□ 13.5
PUM1-207ENST00000440538 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.38□□□□□ -1.392e-6■■■■■ 89.2
PUM1-207ENST00000440538 FXR2P51116 673 aaKnown RBP eCLIP6.89□□□□□ -1.313e-6■■□□□ 13.6
PUM1-207ENST00000440538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.48□□□□□ -1.373e-6■■□□□ 13.2
PUM1-207ENST00000440538 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.36□□□□□ -1.393e-6■■□□□ 12.6
PUM1-207ENST00000440538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.33□□□□□ -1.243e-6■■□□□ 13.5
PUM1-207ENST00000440538 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.87□□□□□ -1.317e-6■□□□□ 9.4
Retrieved 81 of 81 RNA–protein pairs in 393.1 ms