RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.02■■□□□ 1.126e-27■■■■■ 335.4
HSPG2-205ENST00000427897 SF3B1O75533 1304 aaKnown RBP eCLIP22.63■■□□□ 1.214e-7■■■■■ 86.2
HSPG2-205ENST00000427897 SF3B4Q15427 424 aaKnown RBP eCLIP18.89■□□□□ 0.618e-9■■■■■ 81.5
HSPG2-205ENST00000427897 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.04■■□□□ 1.62e-14■■■■■ 74.8
HSPG2-205ENST00000427897 EFTUD2Q15029 972 aaKnown RBP eCLIP19.52■□□□□ 0.728e-8■■■■■ 38.2
HSPG2-205ENST00000427897 AQRO60306 1485 aaKnown RBP eCLIP36.39■■■■□ 3.428e-8■■■■■ 36.2
HSPG2-205ENST00000427897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■■■□ 23.1
HSPG2-205ENST00000427897 FXR2P51116 673 aaKnown RBP eCLIP22.96■■□□□ 1.271e-6■■■■□ 20.7
HSPG2-205ENST00000427897 PCBP1Q15365 356 aaKnown RBP eCLIP22.93■■□□□ 1.264e-6■■■■□ 20.1
HSPG2-205ENST00000427897 PPIGQ13427 754 aaKnown RBP eCLIP23.78■■□□□ 1.41e-6■■■□□ 16.9
HSPG2-205ENST00000427897 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.69■■□□□ 1.382e-6■■■□□ 16.3
HSPG2-205ENST00000427897 EIF3HO15372 352 aaKnown RBP eCLIP19.71■□□□□ 0.753e-10■■■□□ 15.2
HSPG2-205ENST00000427897 FMR1Q06787 632 aaKnown RBP eCLIP25.91■■□□□ 1.741e-6■■□□□ 14.1
HSPG2-205ENST00000427897 SND1Q7KZF4 910 aaKnown RBP eCLIP21.42■■□□□ 1.021e-12■■□□□ 13.5
HSPG2-205ENST00000427897 PCBP2Q15366 365 aaKnown RBP eCLIP19.36■□□□□ 0.696e-6■■□□□ 12.1
HSPG2-205ENST00000427897 RBFOX2O43251 390 aaKnown RBP eCLIP15.9■□□□□ 0.141e-6■■□□□ 12
HSPG2-205ENST00000427897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.09■□□□□ 0.979e-8■■□□□ 11.9
Retrieved 17 of 17 RNA–protein pairs in 10.3 ms