RNA: ENST00000424085.6

PUM1-205, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5 BASIC

Gene PUM1, Length 4,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-205ENST00000424085 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.161e-63■■■■■ 81.3
PUM1-205ENST00000424085 NIP7Q9Y221 180 aaKnown RBP eCLIP9.11□□□□□ -0.952e-60■■■■■ 52.7
PUM1-205ENST00000424085 TRA2AQ13595 282 aaKnown RBP eCLIP7.26□□□□□ -1.252e-46■□□□□ 8.6
PUM1-205ENST00000424085 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.58□□□□□ -1.21e-41■■■■■ 39.4
PUM1-205ENST00000424085 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.74□□□□□ -1.011e-31■■■■□ 21.7
PUM1-205ENST00000424085 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.57□□□□□ -1.22e-27■■■■■ 54.7
PUM1-205ENST00000424085 XRCC6P12956 609 aaKnown RBP eCLIP9.08□□□□□ -0.962e-23■■■■□ 23.7
PUM1-205ENST00000424085 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.991e-19■■■■■ 85.7
PUM1-205ENST00000424085 PCBP1Q15365 356 aaKnown RBP eCLIP8.06□□□□□ -1.122e-16■■■□□ 16.4
PUM1-205ENST00000424085 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.45□□□□□ -1.061e-15■■■■□ 22.2
PUM1-205ENST00000424085 FMR1Q06787 632 aaKnown RBP eCLIP8.32□□□□□ -1.081e-12■■■□□ 16.5
PUM1-205ENST00000424085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.09□□□□□ -1.111e-12■□□□□ 9.3
PUM1-205ENST00000424085 DDX3XO00571 662 aaKnown RBP eCLIP8□□□□□ -1.134e-11■□□□□ 10.2
PUM1-205ENST00000424085 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.61□□□□□ -1.036e-11■■■■■ 44.5
PUM1-205ENST00000424085 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.731e-10■□□□□ 9.9
PUM1-205ENST00000424085 DKC1O60832 514 aaKnown RBP eCLIP8.94□□□□□ -0.984e-10■■■■■ 60.7
PUM1-205ENST00000424085 FUBP3Q96I24 572 aaKnown RBP eCLIP7.85□□□□□ -1.157e-10■■■■■ 27.4
PUM1-205ENST00000424085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.7□□□□□ -1.028e-10■□□□□ 11.2
PUM1-205ENST00000424085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.28□□□□□ -1.089e-10■■■■■ 35.2
PUM1-205ENST00000424085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.65□□□□□ -0.871e-9■■■□□ 15.4
PUM1-205ENST00000424085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.72□□□□□ -1.012e-9■■■□□ 17.4
PUM1-205ENST00000424085 PUM1Q14671 1186 aaKnown RBP eCLIP7.69□□□□□ -1.182e-9■■□□□ 12.8
PUM1-205ENST00000424085 GTF2F1P35269 517 aaKnown RBP eCLIP8.72□□□□□ -1.012e-9■■■■□ 22.9
PUM1-205ENST00000424085 ZC3H11AO75152 810 aaKnown RBP eCLIP8.27□□□□□ -1.092e-9■□□□□ 10.7
PUM1-205ENST00000424085 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.756e-9■■■■■ 29.6
PUM1-205ENST00000424085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.18□□□□□ -1.17e-9■■■■■ 72.6
PUM1-205ENST00000424085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.48□□□□□ -1.058e-9■■■■□ 25
PUM1-205ENST00000424085 U2AF1Q01081 240 aaKnown RBP eCLIP9.98□□□□□ -0.812e-8■□□□□ 9.5
PUM1-205ENST00000424085 SRSF1Q07955 248 aaKnown RBP eCLIP6.45□□□□□ -1.383e-8■■■■□ 24.5
PUM1-205ENST00000424085 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.923e-8■■□□□ 11.6
PUM1-205ENST00000424085 NCBP2P52298 156 aaKnown RBP eCLIP7.7□□□□□ -1.184e-8■□□□□ 9.2
PUM1-205ENST00000424085 DDX6P26196 483 aaKnown RBP eCLIP7.83□□□□□ -1.164e-8■■■■■ 43
PUM1-205ENST00000424085 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.135e-8■■□□□ 11.7
PUM1-205ENST00000424085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.19□□□□□ -1.15e-8■■□□□ 13.4
PUM1-205ENST00000424085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.51□□□□□ -1.056e-8■■■■□ 19.3
PUM1-205ENST00000424085 AKAP1Q92667 903 aaKnown RBP eCLIP7.46□□□□□ -1.216e-8■■■□□ 15.3
PUM1-205ENST00000424085 PABPC4Q13310 644 aaKnown RBP eCLIP8.92□□□□□ -0.987e-8■■■□□ 16.5
PUM1-205ENST00000424085 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.55□□□□□ -1.28e-8■■□□□ 13
PUM1-205ENST00000424085 PTBP1P26599 531 aaKnown RBP eCLIP7.07□□□□□ -1.281e-7■■■□□ 17
PUM1-205ENST00000424085 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.25□□□□□ -1.091e-7■■□□□ 12.9
PUM1-205ENST00000424085 LSM11P83369 360 aaKnown RBP eCLIP6.92□□□□□ -1.31e-7■■■□□ 18.3
PUM1-205ENST00000424085 RBM15Q96T37 977 aaKnown RBP eCLIP8.14□□□□□ -1.111e-7■■□□□ 14.4
PUM1-205ENST00000424085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.161e-7■□□□□ 10.6
PUM1-205ENST00000424085 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.81□□□□□ -0.842e-7■□□□□ 10.7
PUM1-205ENST00000424085 HNRNPMP52272 730 aaKnown RBP eCLIP9.89□□□□□ -0.832e-7■■■■□ 20.6
PUM1-205ENST00000424085 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.092e-7■■■□□ 17.5
PUM1-205ENST00000424085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.91□□□□□ -0.983e-7■□□□□ 10.8
PUM1-205ENST00000424085 PCBP2Q15366 365 aaKnown RBP eCLIP7.61□□□□□ -1.193e-7■■■■■ 49.7
PUM1-205ENST00000424085 RBFOX2O43251 390 aaKnown RBP eCLIP6.66□□□□□ -1.343e-7■■□□□ 12.4
PUM1-205ENST00000424085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.16□□□□□ -1.263e-7■■■■□ 21.2
PUM1-205ENST00000424085 SSBP05455 408 aaKnown RBP eCLIP9.32□□□□□ -0.923e-7■□□□□ 8.1
PUM1-205ENST00000424085 SF3A3Q12874 501 aaKnown RBP eCLIP8.39□□□□□ -1.074e-7■■□□□ 12.4
PUM1-205ENST00000424085 ILF3Q12906 894 aaKnown RBP eCLIP7.98□□□□□ -1.134e-7■■■■□ 19.8
PUM1-205ENST00000424085 KHSRPQ92945 711 aaKnown RBP eCLIP7.36□□□□□ -1.235e-7■■□□□ 13.5
PUM1-205ENST00000424085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■■■■■ 28.7
PUM1-205ENST00000424085 TARDBPQ13148 414 aaKnown RBP eCLIP7.63□□□□□ -1.196e-7■■■■■ 28.1
PUM1-205ENST00000424085 PPIGQ13427 754 aaKnown RBP eCLIP8.07□□□□□ -1.126e-7■■□□□ 11.5
PUM1-205ENST00000424085 U2AF2P26368 475 aaKnown RBP eCLIP8.68□□□□□ -1.026e-7■■■□□ 14.6
PUM1-205ENST00000424085 AQRO60306 1485 aaKnown RBP eCLIP9.56□□□□□ -0.887e-7■■■■■ 33.4
PUM1-205ENST00000424085 G3BP1Q13283 466 aaKnown RBP eCLIP9.66□□□□□ -0.867e-7■■■□□ 14.9
PUM1-205ENST00000424085 SF3B4Q15427 424 aaKnown RBP eCLIP7.68□□□□□ -1.187e-7■■■■□ 23.7
PUM1-205ENST00000424085 BCCIPQ9P287 314 aaKnown RBP eCLIP8.87□□□□□ -0.998e-7■■■■□ 21.9
PUM1-205ENST00000424085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.58□□□□□ -1.29e-7■■■□□ 19
PUM1-205ENST00000424085 QKIQ96PU8 341 aaKnown RBP eCLIP7.77□□□□□ -1.179e-7■■■□□ 18.3
PUM1-205ENST00000424085 NIPBLQ6KC79 2804 aaeCLIP4.61□□□□□ -1.671e-6■■■□□ 16.1
PUM1-205ENST00000424085 AATFQ9NY61 560 aaKnown RBP eCLIP8.81□□□□□ -11e-6■■■■■ 36.6
PUM1-205ENST00000424085 FUSP35637 526 aaKnown RBP eCLIP6.13□□□□□ -1.431e-6■■□□□ 12.3
PUM1-205ENST00000424085 SF3B1O75533 1304 aaKnown RBP eCLIP8.11□□□□□ -1.111e-6■■■■■ 33.2
PUM1-205ENST00000424085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.98□□□□□ -1.131e-6■■■□□ 16
PUM1-205ENST00000424085 RBM22Q9NW64 420 aaKnown RBP eCLIP8.1□□□□□ -1.111e-6■■■■□ 21.8
PUM1-205ENST00000424085 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.45□□□□□ -0.91e-6■■□□□ 14
PUM1-205ENST00000424085 MATR3P43243 847 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■■■□□ 14.6
PUM1-205ENST00000424085 EFTUD2Q15029 972 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■■□□ 16.1
PUM1-205ENST00000424085 EIF3HO15372 352 aaKnown RBP eCLIP8.19□□□□□ -1.11e-6■■■■□ 22.3
PUM1-205ENST00000424085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.84□□□□□ -0.992e-6■■□□□ 13.3
PUM1-205ENST00000424085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.86□□□□□ -0.832e-6■■□□□ 13.8
PUM1-205ENST00000424085 GPKOWQ92917 476 aaPredicted RBP eCLIP8.58□□□□□ -1.042e-6■■■■□ 23.3
PUM1-205ENST00000424085 TIA1P31483 386 aaKnown RBP eCLIP7.52□□□□□ -1.212e-6■■■□□ 18.9
PUM1-205ENST00000424085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.692e-6■□□□□ 10.4
PUM1-205ENST00000424085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.52□□□□□ -0.892e-6■■■■■ 40.6
PUM1-205ENST00000424085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9□□□□□ -0.972e-6■■■■□ 21
PUM1-205ENST00000424085 HNRNPCP07910 306 aaKnown RBP eCLIP7.85□□□□□ -1.152e-6■■□□□ 13.5
PUM1-205ENST00000424085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.8□□□□□ -1.162e-6■■■■■ 89.2
PUM1-205ENST00000424085 FXR2P51116 673 aaKnown RBP eCLIP8.14□□□□□ -1.113e-6■■□□□ 13.6
PUM1-205ENST00000424085 CPSF6Q16630 551 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■■□□□ 11.4
PUM1-205ENST00000424085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.65□□□□□ -1.033e-6■■□□□ 12.6
PUM1-205ENST00000424085 TIAL1Q01085 375 aaKnown RBP eCLIP7.07□□□□□ -1.283e-6■□□□□ 9.2
PUM1-205ENST00000424085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.89□□□□□ -0.993e-6■■□□□ 13.5
PUM1-205ENST00000424085 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.06□□□□□ -1.127e-6■□□□□ 9.4
Retrieved 89 of 89 RNA–protein pairs in 40.5 ms