RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.561e-11■■■■■ 41.1
SMPD4-203ENST00000412570 SF3B1O75533 1304 aaKnown RBP eCLIP10.15□□□□□ -0.782e-10■■■■■ 48.1
SMPD4-203ENST00000412570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.194e-10■■■■■ 33.4
SMPD4-203ENST00000412570 NOLC1Q14978 699 aaKnown RBP eCLIP10.6□□□□□ -0.713e-9■□□□□ 10.1
SMPD4-203ENST00000412570 RBM22Q9NW64 420 aaKnown RBP eCLIP9.98□□□□□ -0.816e-9■■■■■ 36.5
SMPD4-203ENST00000412570 DDX3XO00571 662 aaKnown RBP eCLIP10.42□□□□□ -0.742e-8■□□□□ 8.3
SMPD4-203ENST00000412570 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.862e-8■■■■■ 34.9
SMPD4-203ENST00000412570 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.19□□□□□ -0.783e-8■□□□□ 9.5
SMPD4-203ENST00000412570 GTF2F1P35269 517 aaKnown RBP eCLIP10.16□□□□□ -0.787e-8■■□□□ 11.7
SMPD4-203ENST00000412570 RBFOX2O43251 390 aaKnown RBP eCLIP7.72□□□□□ -1.171e-7■■■■■ 154.7
SMPD4-203ENST00000412570 RBM15Q96T37 977 aaKnown RBP eCLIP10□□□□□ -0.812e-7■■■■□ 19.9
SMPD4-203ENST00000412570 AKAP1Q92667 903 aaKnown RBP eCLIP8.33□□□□□ -1.082e-7■■■■□ 20
SMPD4-203ENST00000412570 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.91□□□□□ -0.984e-7■■■□□ 17.3
SMPD4-203ENST00000412570 EIF3HO15372 352 aaKnown RBP eCLIP9.7□□□□□ -0.864e-7■□□□□ 8.8
SMPD4-203ENST00000412570 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.494e-7■□□□□ 10.4
SMPD4-203ENST00000412570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.77□□□□□ -0.694e-7■□□□□ 10.9
SMPD4-203ENST00000412570 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.8□□□□□ -0.844e-7■■■□□ 17.2
SMPD4-203ENST00000412570 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.595e-7■□□□□ 9.7
SMPD4-203ENST00000412570 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.64□□□□□ -0.876e-7■■■□□ 15.7
SMPD4-203ENST00000412570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.116e-7■■■□□ 16.9
SMPD4-203ENST00000412570 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.047e-7■■■■□ 21.1
SMPD4-203ENST00000412570 PTBP1P26599 531 aaKnown RBP eCLIP8.14□□□□□ -1.117e-7■■■■□ 19.6
SMPD4-203ENST00000412570 NKRFO15226 690 aaKnown RBP eCLIP10.85□□□□□ -0.678e-7■■□□□ 14.5
SMPD4-203ENST00000412570 PPIGQ13427 754 aaKnown RBP eCLIP10.08□□□□□ -0.88e-7■■■□□ 15.7
SMPD4-203ENST00000412570 ILF3Q12906 894 aaKnown RBP eCLIP9.42□□□□□ -0.98e-7■■■□□ 15
SMPD4-203ENST00000412570 SUB1P53999 127 aaKnown RBP eCLIP7.67□□□□□ -1.189e-7■■■□□ 17.7
SMPD4-203ENST00000412570 EFTUD2Q15029 972 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■■■■ 35.4
SMPD4-203ENST00000412570 SF3A3Q12874 501 aaKnown RBP eCLIP10.16□□□□□ -0.781e-6■■■■□ 22.7
SMPD4-203ENST00000412570 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.46□□□□□ -0.731e-6■■■■■ 32
SMPD4-203ENST00000412570 PRPF4O43172 522 aaKnown RBP eCLIP9.58□□□□□ -0.881e-6■□□□□ 8.5
SMPD4-203ENST00000412570 SF3B4Q15427 424 aaKnown RBP eCLIP8.32□□□□□ -1.081e-6■■■■■ 54.2
SMPD4-203ENST00000412570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■■■■□ 23.9
SMPD4-203ENST00000412570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■■□ 22.5
SMPD4-203ENST00000412570 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.781e-6■■■□□ 15.9
SMPD4-203ENST00000412570 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■■■□□ 17.9
SMPD4-203ENST00000412570 HNRNPMP52272 730 aaKnown RBP eCLIP14.43□□□□□ -0.11e-6■■■■□ 22.6
SMPD4-203ENST00000412570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■■■■■ 118.5
SMPD4-203ENST00000412570 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■□□□ 12.8
SMPD4-203ENST00000412570 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.97□□□□□ -0.812e-6■□□□□ 11
SMPD4-203ENST00000412570 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■■□□ 17.7
SMPD4-203ENST00000412570 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.653e-6■□□□□ 9
SMPD4-203ENST00000412570 PCBP2Q15366 365 aaKnown RBP eCLIP9.37□□□□□ -0.913e-6■■■■□ 25.6
SMPD4-203ENST00000412570 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■■■■■ 34.1
SMPD4-203ENST00000412570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.32□□□□□ -0.64e-6■■□□□ 13.5
SMPD4-203ENST00000412570 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.115e-6■■■■■ 34.5
SMPD4-203ENST00000412570 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.956e-6■□□□□ 10.9
SMPD4-203ENST00000412570 PCBP1Q15365 356 aaKnown RBP eCLIP10.17□□□□□ -0.789e-6■■□□□ 13.3
Retrieved 47 of 47 RNA–protein pairs in 27.3 ms