RNA: ENST00000399010.5

TTC3-203, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene TTC3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-203ENST00000399010 SF3B1O75533 1304 aaKnown RBP eCLIP19.77■□□□□ 0.761e-7■■■■■ 60.3
TTC3-203ENST00000399010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.91■□□□□ 0.781e-6■■■■■ 52.4
TTC3-203ENST00000399010 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.21■□□□□ 0.036e-8■■■■■ 48.7
TTC3-203ENST00000399010 DDX3XO00571 662 aaKnown RBP eCLIP19.52■□□□□ 0.729e-21■■■■■ 44.5
TTC3-203ENST00000399010 SMNDC1O75940 238 aaKnown RBP eCLIP16.32■□□□□ 0.21e-23■■■■■ 42.4
TTC3-203ENST00000399010 SF3B4Q15427 424 aaKnown RBP eCLIP16.45■□□□□ 0.224e-16■■■■■ 40.8
TTC3-203ENST00000399010 MATR3P43243 847 aaKnown RBP eCLIP20.2■□□□□ 0.828e-9■■■■■ 35.3
TTC3-203ENST00000399010 TARDBPQ13148 414 aaKnown RBP eCLIP17.59■□□□□ 0.413e-7■■■■■ 30.6
TTC3-203ENST00000399010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.33■■□□□ 1.649e-9■■■■■ 29.9
TTC3-203ENST00000399010 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.89■□□□□ 0.623e-6■■■■■ 28.8
TTC3-203ENST00000399010 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.3■□□□□ 0.527e-6■■■■■ 27.5
TTC3-203ENST00000399010 RBM22Q9NW64 420 aaKnown RBP eCLIP18.77■□□□□ 0.62e-6■■■■■ 27.2
TTC3-203ENST00000399010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.62■■■□□ 2.178e-9■■■■□ 23.3
TTC3-203ENST00000399010 NONOQ15233 471 aaKnown RBP eCLIP21.07■□□□□ 0.965e-9■■■■□ 22.3
TTC3-203ENST00000399010 HNRNPMP52272 730 aaKnown RBP eCLIP28.15■■■□□ 2.12e-7■■■■□ 21.9
TTC3-203ENST00000399010 TRA2AQ13595 282 aaKnown RBP eCLIP17.65■□□□□ 0.422e-10■■■■□ 21.7
TTC3-203ENST00000399010 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.74■□□□□ 0.756e-9■■■■□ 21.6
TTC3-203ENST00000399010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.1■■■□□ 2.093e-9■■■■□ 21.4
TTC3-203ENST00000399010 EFTUD2Q15029 972 aaKnown RBP eCLIP18.32■□□□□ 0.529e-8■■■■□ 21.4
TTC3-203ENST00000399010 TIA1P31483 386 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■■■■□ 21.3
TTC3-203ENST00000399010 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■■■□ 20.7
TTC3-203ENST00000399010 FXR2P51116 673 aaKnown RBP eCLIP20.79■□□□□ 0.921e-9■■■■□ 20.7
TTC3-203ENST00000399010 SRSF1Q07955 248 aaKnown RBP eCLIP16.15■□□□□ 0.185e-7■■■■□ 19.4
TTC3-203ENST00000399010 NKRFO15226 690 aaKnown RBP eCLIP20.77■□□□□ 0.916e-8■■■□□ 18.1
TTC3-203ENST00000399010 RBFOX2O43251 390 aaKnown RBP eCLIP14.75□□□□□ -0.051e-12■■■□□ 17.5
TTC3-203ENST00000399010 EWSR1Q01844 656 aaKnown RBP eCLIP14.32□□□□□ -0.127e-11■■■□□ 17.4
TTC3-203ENST00000399010 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.64■□□□□ 0.254e-7■■■□□ 17.3
TTC3-203ENST00000399010 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.26■□□□□ 0.032e-7■■■□□ 17.2
TTC3-203ENST00000399010 RPS3P23396 243 aaKnown RBP eCLIP18.19■□□□□ 0.53e-8■■■□□ 17.1
TTC3-203ENST00000399010 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.613e-11■■■□□ 16.4
TTC3-203ENST00000399010 KHSRPQ92945 711 aaKnown RBP eCLIP19.33■□□□□ 0.696e-9■■■□□ 15.8
TTC3-203ENST00000399010 AQRO60306 1485 aaKnown RBP eCLIP30.83■■■□□ 2.531e-6■■■□□ 15.8
TTC3-203ENST00000399010 FMR1Q06787 632 aaKnown RBP eCLIP21.86■■□□□ 1.093e-10■■■□□ 15.6
TTC3-203ENST00000399010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.33■■□□□ 1.491e-7■■■□□ 15.5
TTC3-203ENST00000399010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.1■□□□□ 0.979e-14■■■□□ 14.6
TTC3-203ENST00000399010 XRCC6P12956 609 aaKnown RBP eCLIP20.56■□□□□ 0.883e-6■■□□□ 14.4
TTC3-203ENST00000399010 SF3A3Q12874 501 aaKnown RBP eCLIP17.6■□□□□ 0.411e-6■■□□□ 14.2
TTC3-203ENST00000399010 CSTF2P33240 577 aaKnown RBP eCLIP17.64■□□□□ 0.415e-7■■□□□ 14.1
TTC3-203ENST00000399010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.46■■□□□ 1.995e-7■■□□□ 13.6
TTC3-203ENST00000399010 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.482e-6■■□□□ 12.7
TTC3-203ENST00000399010 ZNF622Q969S3 477 aaKnown RBP eCLIP22.93■■□□□ 1.267e-16■■□□□ 12.6
TTC3-203ENST00000399010 HNRNPCP07910 306 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■□□□ 12
TTC3-203ENST00000399010 RBM5P52756 815 aaKnown RBP eCLIP22.24■■□□□ 1.158e-6■■□□□ 11.9
TTC3-203ENST00000399010 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.86■□□□□ 0.615e-7■■□□□ 11.6
TTC3-203ENST00000399010 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.06■□□□□ 0.82e-19■□□□□ 11.3
TTC3-203ENST00000399010 TIAL1Q01085 375 aaKnown RBP eCLIP18.14■□□□□ 0.494e-9■□□□□ 10.2
TTC3-203ENST00000399010 EIF4G2P78344 907 aaKnown RBP eCLIP26.03■■□□□ 1.761e-6■□□□□ 10
TTC3-203ENST00000399010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.85■■□□□ 1.095e-6■□□□□ 9.7
TTC3-203ENST00000399010 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.92■□□□□ 0.34e-10■□□□□ 9.5
TTC3-203ENST00000399010 U2AF2P26368 475 aaKnown RBP eCLIP21.1■□□□□ 0.977e-8■□□□□ 9.5
TTC3-203ENST00000399010 PPIGQ13427 754 aaKnown RBP eCLIP20.11■□□□□ 0.819e-7■□□□□ 9.5
TTC3-203ENST00000399010 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.74■□□□□ 0.912e-10■□□□□ 9.5
TTC3-203ENST00000399010 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.4■□□□□ 0.385e-7■□□□□ 9.4
TTC3-203ENST00000399010 NCBP2P52298 156 aaKnown RBP eCLIP17.29■□□□□ 0.362e-13■□□□□ 9.2
TTC3-203ENST00000399010 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.831e-7■□□□□ 8.6
TTC3-203ENST00000399010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.87■■□□□ 1.092e-7■□□□□ 8.5
TTC3-203ENST00000399010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.75■■□□□ 1.071e-9■□□□□ 8.5
TTC3-203ENST00000399010 SND1Q7KZF4 910 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■□□□□ 8.4
Retrieved 58 of 58 RNA–protein pairs in 29.7 ms