RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■■■ 206.2
RCC1-204ENST00000398958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.425e-7■■■■■ 139.3
RCC1-204ENST00000398958 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.42e-11■■■■■ 62.9
RCC1-204ENST00000398958 ZC3H11AO75152 810 aaKnown RBP eCLIP11.82□□□□□ -0.524e-20■■■■■ 59.1
RCC1-204ENST00000398958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.47□□□□□ -0.573e-7■■■■■ 50
RCC1-204ENST00000398958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.33□□□□□ -0.922e-7■■■■■ 49.3
RCC1-204ENST00000398958 DKC1O60832 514 aaKnown RBP eCLIP11.89□□□□□ -0.511e-323■■■■■ 48.7
RCC1-204ENST00000398958 NCBP2P52298 156 aaKnown RBP eCLIP10.58□□□□□ -0.724e-33■■■■■ 42.7
RCC1-204ENST00000398958 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■■■■■ 39.6
RCC1-204ENST00000398958 CPSF6Q16630 551 aaKnown RBP eCLIP10.98□□□□□ -0.657e-16■■■■■ 39.3
RCC1-204ENST00000398958 SUB1P53999 127 aaKnown RBP eCLIP8.9□□□□□ -0.984e-8■■■■■ 38
RCC1-204ENST00000398958 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.284e-10■■■■■ 37.7
RCC1-204ENST00000398958 SF3B4Q15427 424 aaKnown RBP eCLIP11.08□□□□□ -0.649e-7■■■■■ 37.3
RCC1-204ENST00000398958 CSTF2P33240 577 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■■■■■ 30.1
RCC1-204ENST00000398958 DDX3XO00571 662 aaKnown RBP eCLIP12.17□□□□□ -0.464e-14■■■■■ 28.6
RCC1-204ENST00000398958 TIA1P31483 386 aaKnown RBP eCLIP10.71□□□□□ -0.72e-8■■■■■ 27.6
RCC1-204ENST00000398958 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.537e-13■■■■■ 27.3
RCC1-204ENST00000398958 RBM22Q9NW64 420 aaKnown RBP eCLIP11.36□□□□□ -0.592e-18■■■■■ 27.1
RCC1-204ENST00000398958 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.63□□□□□ -0.714e-55■■■■□ 25.9
RCC1-204ENST00000398958 EFTUD2Q15029 972 aaKnown RBP eCLIP11.75□□□□□ -0.533e-8■■■■□ 24.7
RCC1-204ENST00000398958 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.465e-7■■■■□ 24.4
RCC1-204ENST00000398958 SF3A3Q12874 501 aaKnown RBP eCLIP12.19□□□□□ -0.462e-8■■■■□ 23.3
RCC1-204ENST00000398958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.75□□□□□ -0.532e-18■■■■□ 23.2
RCC1-204ENST00000398958 RPS3P23396 243 aaKnown RBP eCLIP10.88□□□□□ -0.672e-8■■■■□ 22.6
RCC1-204ENST00000398958 RBFOX2O43251 390 aaKnown RBP eCLIP9.37□□□□□ -0.918e-7■■■■□ 22
RCC1-204ENST00000398958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.95□□□□□ -0.663e-6■■■■□ 21.6
RCC1-204ENST00000398958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.14□□□□□ -0.473e-9■■■□□ 16.4
RCC1-204ENST00000398958 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■■■□□ 16.3
RCC1-204ENST00000398958 HNRNPKP61978 463 aaKnown RBP eCLIP10.28□□□□□ -0.767e-7■■■□□ 16.2
RCC1-204ENST00000398958 FUSP35637 526 aaKnown RBP eCLIP7.49□□□□□ -1.211e-6■■■□□ 15.1
RCC1-204ENST00000398958 METAP2P50579 478 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■□□ 14.7
RCC1-204ENST00000398958 TIAL1Q01085 375 aaKnown RBP eCLIP11.17□□□□□ -0.625e-7■■□□□ 14.4
RCC1-204ENST00000398958 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.422e-7■■□□□ 14.4
RCC1-204ENST00000398958 RBM15Q96T37 977 aaKnown RBP eCLIP11.78□□□□□ -0.521e-8■■□□□ 14.3
RCC1-204ENST00000398958 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.658e-7■■□□□ 14.1
RCC1-204ENST00000398958 HNRNPCP07910 306 aaKnown RBP eCLIP11.51□□□□□ -0.571e-17■■□□□ 13.5
RCC1-204ENST00000398958 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.253e-26■■□□□ 13.5
RCC1-204ENST00000398958 SRSF9Q13242 221 aaKnown RBP eCLIP8.55□□□□□ -1.041e-10■■□□□ 13
RCC1-204ENST00000398958 NIPBLQ6KC79 2804 aaeCLIP9.03□□□□□ -0.963e-44■■□□□ 13
RCC1-204ENST00000398958 SRSF1Q07955 248 aaKnown RBP eCLIP8.83□□□□□ -13e-23■■□□□ 12.7
RCC1-204ENST00000398958 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.267e-7■■□□□ 12.5
RCC1-204ENST00000398958 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.44e-6■■□□□ 12.4
RCC1-204ENST00000398958 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■■□□□ 12.2
RCC1-204ENST00000398958 GRSF1Q12849 480 aaKnown RBP eCLIP11.17□□□□□ -0.629e-7■■□□□ 12.1
RCC1-204ENST00000398958 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■□□□ 12
RCC1-204ENST00000398958 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.434e-7■■□□□ 12
RCC1-204ENST00000398958 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.165e-6■■□□□ 12
RCC1-204ENST00000398958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.2□□□□□ -0.621e-8■■□□□ 11.8
RCC1-204ENST00000398958 U2AF2P26368 475 aaKnown RBP eCLIP13.36□□□□□ -0.272e-12■■□□□ 11.6
RCC1-204ENST00000398958 AATFQ9NY61 560 aaKnown RBP eCLIP13.08□□□□□ -0.322e-14■□□□□ 11.3
RCC1-204ENST00000398958 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.1□□□□□ -0.633e-18■□□□□ 11.2
RCC1-204ENST00000398958 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.44□□□□□ -0.582e-7■□□□□ 10.7
RCC1-204ENST00000398958 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.352e-47■□□□□ 10.3
RCC1-204ENST00000398958 ILF3Q12906 894 aaKnown RBP eCLIP10.49□□□□□ -0.734e-6■□□□□ 10.1
RCC1-204ENST00000398958 PCBP2Q15366 365 aaKnown RBP eCLIP10.91□□□□□ -0.661e-6■□□□□ 9.6
RCC1-204ENST00000398958 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.475e-43■□□□□ 9.5
RCC1-204ENST00000398958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■□□□□ 9.3
RCC1-204ENST00000398958 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■□□□□ 9.2
RCC1-204ENST00000398958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■□□□□ 8.2
RCC1-204ENST00000398958 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■□□□□ 8.1
Retrieved 60 of 60 RNA–protein pairs in 31.9 ms