RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TIA1P31483 386 aaKnown RBP eCLIP22.83■■□□□ 1.254e-16■■■■■ 56.4
PABPN1-202ENST00000397276 SF3B1O75533 1304 aaKnown RBP eCLIP24.29■■□□□ 1.485e-8■■■■■ 42.1
PABPN1-202ENST00000397276 GTF2F1P35269 517 aaKnown RBP eCLIP27.67■■■□□ 2.021e-11■■■■■ 33.7
PABPN1-202ENST00000397276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.64■■□□□ 1.381e-8■■■■□ 26.3
PABPN1-202ENST00000397276 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.146e-8■■■■□ 24.8
PABPN1-202ENST00000397276 DDX42Q86XP3 938 aaKnown RBP eCLIP25.7■■□□□ 1.75e-9■■■■□ 23
PABPN1-202ENST00000397276 PCBP2Q15366 365 aaKnown RBP eCLIP23.35■■□□□ 1.339e-14■■■■□ 22.5
PABPN1-202ENST00000397276 PABPC4Q13310 644 aaKnown RBP eCLIP26.29■■□□□ 1.87e-7■■■■□ 21.5
PABPN1-202ENST00000397276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.4■■□□□ 1.662e-9■■■■□ 21.3
PABPN1-202ENST00000397276 SF3B4Q15427 424 aaKnown RBP eCLIP22.72■■□□□ 1.233e-9■■■■□ 20.9
PABPN1-202ENST00000397276 PABPN1Q86U42 306 aaKnown RBP eCLIP38.46■■■■□ 3.757e-24■■■■□ 20
PABPN1-202ENST00000397276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.23■■□□□ 1.315e-9■■■■□ 19.8
PABPN1-202ENST00000397276 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.74■■□□□ 1.237e-15■■■■□ 19.8
PABPN1-202ENST00000397276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.25■□□□□ 0.511e-12■■■■□ 19.6
PABPN1-202ENST00000397276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.07■■□□□ 1.62e-20■■■□□ 19.2
PABPN1-202ENST00000397276 EFTUD2Q15029 972 aaKnown RBP eCLIP24.84■■□□□ 1.572e-7■■■□□ 19.1
PABPN1-202ENST00000397276 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.59■■□□□ 1.531e-25■■■□□ 19
PABPN1-202ENST00000397276 PRPF4O43172 522 aaKnown RBP eCLIP24.71■■□□□ 1.553e-10■■■□□ 18.8
PABPN1-202ENST00000397276 XRCC6P12956 609 aaKnown RBP eCLIP29.4■■■□□ 2.34e-16■■■□□ 18.2
PABPN1-202ENST00000397276 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.69■■□□□ 1.72e-30■■■□□ 18.1
PABPN1-202ENST00000397276 DDX6P26196 483 aaKnown RBP eCLIP22.98■■□□□ 1.276e-16■■■□□ 17.8
PABPN1-202ENST00000397276 LSM11P83369 360 aaKnown RBP eCLIP22.43■■□□□ 1.187e-9■■■□□ 17.7
PABPN1-202ENST00000397276 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.46■■□□□ 1.673e-6■■■□□ 17.7
PABPN1-202ENST00000397276 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.41■■□□□ 1.55e-6■■■□□ 17.5
PABPN1-202ENST00000397276 PPIGQ13427 754 aaKnown RBP eCLIP22.82■■□□□ 1.242e-13■■■□□ 17.4
PABPN1-202ENST00000397276 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.68■■□□□ 1.061e-6■■■□□ 16.9
PABPN1-202ENST00000397276 WDR43Q15061 677 aaKnown RBP eCLIP31.56■■■□□ 2.644e-6■■■□□ 16.5
PABPN1-202ENST00000397276 U2AF1Q01081 240 aaKnown RBP eCLIP30.91■■■□□ 2.547e-10■■■□□ 16.4
PABPN1-202ENST00000397276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.81■■□□□ 1.888e-11■■■□□ 16.3
PABPN1-202ENST00000397276 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.25■■□□□ 1.479e-7■■■□□ 15
PABPN1-202ENST00000397276 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.76■■□□□ 1.078e-15■■■□□ 14.9
PABPN1-202ENST00000397276 RBFOX2O43251 390 aaKnown RBP eCLIP19.5■□□□□ 0.713e-11■■□□□ 14.3
PABPN1-202ENST00000397276 GRSF1Q12849 480 aaKnown RBP eCLIP22.99■■□□□ 1.274e-69■■□□□ 14.1
PABPN1-202ENST00000397276 LARP4Q71RC2 724 aaKnown RBP eCLIP23.65■■□□□ 1.383e-20■■□□□ 14
PABPN1-202ENST00000397276 ZC3H11AO75152 810 aaKnown RBP eCLIP25.35■■□□□ 1.652e-9■■□□□ 14
PABPN1-202ENST00000397276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.86■■□□□ 1.736e-8■■□□□ 14
PABPN1-202ENST00000397276 U2AF2P26368 475 aaKnown RBP eCLIP27.55■■■□□ 24e-24■■□□□ 13.9
PABPN1-202ENST00000397276 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.89■■■□□ 2.061e-11■■□□□ 13.8
PABPN1-202ENST00000397276 SF3A3Q12874 501 aaKnown RBP eCLIP25.34■■□□□ 1.651e-7■■□□□ 13.8
PABPN1-202ENST00000397276 FTOQ9C0B1 505 aaKnown RBP eCLIP27.94■■■□□ 2.062e-10■■□□□ 12.9
PABPN1-202ENST00000397276 AARSP49588 968 aaKnown RBP eCLIP25.93■■□□□ 1.748e-7■■□□□ 12.8
PABPN1-202ENST00000397276 KHSRPQ92945 711 aaKnown RBP eCLIP24.74■■□□□ 1.551e-8■■□□□ 12.8
PABPN1-202ENST00000397276 EIF4G2P78344 907 aaKnown RBP eCLIP33.32■■■□□ 2.933e-7■■□□□ 12.5
PABPN1-202ENST00000397276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.72■■■□□ 2.192e-15■■□□□ 12.5
PABPN1-202ENST00000397276 RBM22Q9NW64 420 aaKnown RBP eCLIP24.12■■□□□ 1.451e-14■■□□□ 11.9
PABPN1-202ENST00000397276 FKBP4Q02790 459 aaKnown RBP eCLIP28.22■■■□□ 2.113e-10■■□□□ 11.7
PABPN1-202ENST00000397276 ZNF622Q969S3 477 aaKnown RBP eCLIP26.65■■□□□ 1.862e-8■■□□□ 11.7
PABPN1-202ENST00000397276 DDX3XO00571 662 aaKnown RBP eCLIP25.86■■□□□ 1.735e-8■■□□□ 11.6
PABPN1-202ENST00000397276 QKIQ96PU8 341 aaKnown RBP eCLIP24.51■■□□□ 1.512e-13■■□□□ 11.4
PABPN1-202ENST00000397276 PCBP1Q15365 356 aaKnown RBP eCLIP24.52■■□□□ 1.525e-7■■□□□ 11.4
PABPN1-202ENST00000397276 ZRANB2O95218 330 aaKnown RBP eCLIP26.7■■□□□ 1.873e-7■□□□□ 11.1
PABPN1-202ENST00000397276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.35■■■■□ 3.091e-10■□□□□ 11
PABPN1-202ENST00000397276 GPKOWQ92917 476 aaPredicted RBP eCLIP27.09■■□□□ 1.932e-8■□□□□ 11
PABPN1-202ENST00000397276 CDC40O60508 579 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■□□□□ 11
PABPN1-202ENST00000397276 SMNDC1O75940 238 aaKnown RBP eCLIP24.68■■□□□ 1.548e-8■□□□□ 11
PABPN1-202ENST00000397276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.61■■□□□ 1.212e-8■□□□□ 10.9
PABPN1-202ENST00000397276 SRSF1Q07955 248 aaKnown RBP eCLIP17.9■□□□□ 0.464e-11■□□□□ 10.8
PABPN1-202ENST00000397276 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.04■■□□□ 1.123e-8■□□□□ 10.8
PABPN1-202ENST00000397276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.84■■■□□ 2.852e-11■□□□□ 10.7
PABPN1-202ENST00000397276 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.81■■□□□ 1.42e-38■□□□□ 10.5
PABPN1-202ENST00000397276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.78■■■□□ 2.843e-15■□□□□ 10.2
PABPN1-202ENST00000397276 NCBP2P52298 156 aaKnown RBP eCLIP22.47■■□□□ 1.198e-21■□□□□ 9.8
PABPN1-202ENST00000397276 FUBP3Q96I24 572 aaKnown RBP eCLIP23.93■■□□□ 1.422e-6■□□□□ 9.2
PABPN1-202ENST00000397276 RBM15Q96T37 977 aaKnown RBP eCLIP25.03■■□□□ 1.61e-11■□□□□ 9.2
PABPN1-202ENST00000397276 NOLC1Q14978 699 aaKnown RBP eCLIP27.87■■■□□ 2.058e-9■□□□□ 9.1
PABPN1-202ENST00000397276 FUSP35637 526 aaKnown RBP eCLIP14.99□□□□□ -0.014e-15■□□□□ 8.9
PABPN1-202ENST00000397276 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.24■■□□□ 1.472e-11■□□□□ 8.8
PABPN1-202ENST00000397276 G3BP1Q13283 466 aaKnown RBP eCLIP28.76■■■□□ 2.198e-7■□□□□ 8.4
PABPN1-202ENST00000397276 EWSR1Q01844 656 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■□□□□ 8.4
PABPN1-202ENST00000397276 SRSF9Q13242 221 aaKnown RBP eCLIP17.51■□□□□ 0.398e-30■□□□□ 8.3
PABPN1-202ENST00000397276 RBM5P52756 815 aaKnown RBP eCLIP26.61■■□□□ 1.851e-6■□□□□ 8
PABPN1-202ENST00000397276 SRSF7Q16629 238 aaKnown RBP eCLIP20.15■□□□□ 0.824e-7■□□□□ 8
Retrieved 72 of 72 RNA–protein pairs in 365.5 ms