RNA: ENST00000394935.7

RPL23A-202, Transcript of ribosomal protein L23a, humanhuman

TSL 3

Gene RPL23A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-202ENST00000394935 NOLC1Q14978 699 aaKnown RBP eCLIP10.73□□□□□ -0.696e-40■■■■■ 136.2
RPL23A-202ENST00000394935 SF3B1O75533 1304 aaKnown RBP eCLIP10.73□□□□□ -0.695e-10■■■■■ 120.6
RPL23A-202ENST00000394935 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.375e-26■■■■■ 60.5
RPL23A-202ENST00000394935 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.53e-28■■■■■ 45.7
RPL23A-202ENST00000394935 SMNDC1O75940 238 aaKnown RBP eCLIP8.81□□□□□ -16e-41■■■■■ 43.1
RPL23A-202ENST00000394935 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.82□□□□□ -0.849e-7■■■■■ 33.1
RPL23A-202ENST00000394935 NIPBLQ6KC79 2804 aaeCLIP8.03□□□□□ -1.129e-7■■■■■ 28.7
RPL23A-202ENST00000394935 SF3A3Q12874 501 aaKnown RBP eCLIP9.38□□□□□ -0.915e-11■■■■■ 28
RPL23A-202ENST00000394935 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.53□□□□□ -0.884e-11■■■■■ 27.3
RPL23A-202ENST00000394935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.41□□□□□ -0.743e-7■■■■□ 26.7
RPL23A-202ENST00000394935 PTBP1P26599 531 aaKnown RBP eCLIP8.3□□□□□ -1.083e-27■■■■□ 26.7
RPL23A-202ENST00000394935 DKC1O60832 514 aaKnown RBP eCLIP11.06□□□□□ -0.642e-18■■■■□ 25.5
RPL23A-202ENST00000394935 SF3B4Q15427 424 aaKnown RBP eCLIP8.99□□□□□ -0.971e-21■■■■□ 25.1
RPL23A-202ENST00000394935 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.346e-9■■■■□ 24.4
RPL23A-202ENST00000394935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.281e-17■■■■□ 22.8
RPL23A-202ENST00000394935 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.57□□□□□ -0.562e-13■■■■□ 22.5
RPL23A-202ENST00000394935 SSBP05455 408 aaKnown RBP eCLIP10.82□□□□□ -0.682e-8■■■■□ 20.3
RPL23A-202ENST00000394935 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.19□□□□□ -0.626e-8■■■□□ 18.1
RPL23A-202ENST00000394935 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.3□□□□□ -0.769e-8■■■□□ 17.4
RPL23A-202ENST00000394935 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.2□□□□□ -0.949e-62■■■□□ 16.5
RPL23A-202ENST00000394935 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.75□□□□□ -0.859e-8■■■□□ 15.8
RPL23A-202ENST00000394935 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.068e-9■■■□□ 15.2
RPL23A-202ENST00000394935 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.04□□□□□ -0.82e-27■■■□□ 15.1
RPL23A-202ENST00000394935 XRCC6P12956 609 aaKnown RBP eCLIP10.97□□□□□ -0.652e-19■■■□□ 14.6
RPL23A-202ENST00000394935 TRA2AQ13595 282 aaKnown RBP eCLIP9.67□□□□□ -0.868e-8■■□□□ 14.3
RPL23A-202ENST00000394935 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.61□□□□□ -0.871e-7■■□□□ 14.3
RPL23A-202ENST00000394935 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.95□□□□□ -0.664e-13■■□□□ 14.2
RPL23A-202ENST00000394935 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.954e-11■■□□□ 14.2
RPL23A-202ENST00000394935 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.21□□□□□ -0.774e-15■■□□□ 13.9
RPL23A-202ENST00000394935 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.524e-7■■□□□ 13.8
RPL23A-202ENST00000394935 RBM22Q9NW64 420 aaKnown RBP eCLIP9.87□□□□□ -0.832e-6■■□□□ 13.6
RPL23A-202ENST00000394935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.017e-8■■□□□ 13.2
RPL23A-202ENST00000394935 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.617e-8■■□□□ 13
RPL23A-202ENST00000394935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.73■□□□□ 0.117e-15■■□□□ 12
RPL23A-202ENST00000394935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.13□□□□□ -1.112e-10■■□□□ 11.8
RPL23A-202ENST00000394935 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.331e-34■■□□□ 11.8
RPL23A-202ENST00000394935 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.63□□□□□ -0.879e-22■■□□□ 11.5
RPL23A-202ENST00000394935 PUM1Q14671 1186 aaKnown RBP eCLIP10.13□□□□□ -0.793e-29■□□□□ 11.3
RPL23A-202ENST00000394935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.99□□□□□ -0.019e-7■□□□□ 11.3
RPL23A-202ENST00000394935 AARSP49588 968 aaKnown RBP eCLIP10.62□□□□□ -0.713e-6■□□□□ 11.3
RPL23A-202ENST00000394935 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.514e-15■□□□□ 10.9
RPL23A-202ENST00000394935 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.744e-8■□□□□ 10
RPL23A-202ENST00000394935 TROVE2P10155 538 aaKnown RBP eCLIP9.4□□□□□ -0.91e-323■□□□□ 9.8
RPL23A-202ENST00000394935 EFTUD2Q15029 972 aaKnown RBP eCLIP9.63□□□□□ -0.874e-6■□□□□ 9.8
RPL23A-202ENST00000394935 SLBPQ14493 270 aaKnown RBP eCLIP9.27□□□□□ -0.937e-9■□□□□ 9.4
RPL23A-202ENST00000394935 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.063e-6■□□□□ 9.2
RPL23A-202ENST00000394935 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.371e-51■□□□□ 9
RPL23A-202ENST00000394935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.551e-10■□□□□ 8.3
RPL23A-202ENST00000394935 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.366e-11■□□□□ 8.2
Retrieved 49 of 49 RNA–protein pairs in 30.3 ms