RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 PCBP2Q15366 365 aaKnown RBP eCLIP27.58■■■□□ 2.012e-8■■■■■ 65
SDCCAG3-204ENST00000371725 ZRANB2O95218 330 aaKnown RBP eCLIP31.9■■■□□ 2.74e-7■■■■■ 40.3
SDCCAG3-204ENST00000371725 PABPN1Q86U42 306 aaKnown RBP eCLIP49.29■■■■■ 5.481e-6■■■■■ 35.7
SDCCAG3-204ENST00000371725 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.93■■■□□ 2.061e-7■■■■■ 35.3
SDCCAG3-204ENST00000371725 TIA1P31483 386 aaKnown RBP eCLIP26.86■■□□□ 1.894e-10■■■■■ 34.4
SDCCAG3-204ENST00000371725 PUM1Q14671 1186 aaKnown RBP eCLIP26.65■■□□□ 1.866e-8■■■■■ 32.3
SDCCAG3-204ENST00000371725 DDX59Q5T1V6 619 aaKnown RBP eCLIP26.89■■□□□ 1.93e-7■■■■■ 31.8
SDCCAG3-204ENST00000371725 AARSP49588 968 aaKnown RBP eCLIP31.19■■■□□ 2.584e-6■■■■■ 30.6
SDCCAG3-204ENST00000371725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.33■■■■■ 4.213e-9■■■■□ 25.7
SDCCAG3-204ENST00000371725 SF3B4Q15427 424 aaKnown RBP eCLIP26.55■■□□□ 1.842e-10■■■■□ 25.2
SDCCAG3-204ENST00000371725 PCBP1Q15365 356 aaKnown RBP eCLIP29.83■■■□□ 2.374e-11■■■■□ 24.3
SDCCAG3-204ENST00000371725 EFTUD2Q15029 972 aaKnown RBP eCLIP29.28■■■□□ 2.281e-6■■■■□ 23.2
SDCCAG3-204ENST00000371725 AQRO60306 1485 aaKnown RBP eCLIP44.13■■■■■ 4.654e-7■■■■□ 22
SDCCAG3-204ENST00000371725 ZC3H11AO75152 810 aaKnown RBP eCLIP29.97■■■□□ 2.398e-6■■■■□ 20.1
SDCCAG3-204ENST00000371725 PABPC4Q13310 644 aaKnown RBP eCLIP31.13■■■□□ 2.571e-6■■■□□ 19.1
SDCCAG3-204ENST00000371725 HNRNPKP61978 463 aaKnown RBP eCLIP26.5■■□□□ 1.833e-7■■■□□ 19
SDCCAG3-204ENST00000371725 TIAL1Q01085 375 aaKnown RBP eCLIP27.92■■■□□ 2.063e-8■■■□□ 19
SDCCAG3-204ENST00000371725 RBM15Q96T37 977 aaKnown RBP eCLIP29.62■■■□□ 2.334e-15■■■□□ 18.6
SDCCAG3-204ENST00000371725 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.97■■□□□ 1.751e-6■■■□□ 16.8
SDCCAG3-204ENST00000371725 UPF1Q92900 1129 aaKnown RBP eCLIP32.78■■■□□ 2.848e-9■■■□□ 16.6
SDCCAG3-204ENST00000371725 SMNDC1O75940 238 aaKnown RBP eCLIP29.17■■■□□ 2.266e-9■■■□□ 16.4
SDCCAG3-204ENST00000371725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.13■■■□□ 2.737e-10■■■□□ 15.6
SDCCAG3-204ENST00000371725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.58■■■□□ 2.652e-6■■■□□ 15.6
SDCCAG3-204ENST00000371725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.26■■□□□ 1.151e-6■■■□□ 15
SDCCAG3-204ENST00000371725 ZNF800Q2TB10 664 aaPredicted RBP eCLIP26.27■■□□□ 1.88e-7■■■□□ 14.6
SDCCAG3-204ENST00000371725 DDX3XO00571 662 aaKnown RBP eCLIP30.47■■■□□ 2.473e-10■■□□□ 14.5
SDCCAG3-204ENST00000371725 RBFOX2O43251 390 aaKnown RBP eCLIP23.2■■□□□ 1.31e-6■■□□□ 14.1
SDCCAG3-204ENST00000371725 PPIGQ13427 754 aaKnown RBP eCLIP28.78■■■□□ 2.25e-7■■□□□ 13.4
SDCCAG3-204ENST00000371725 SF3A3Q12874 501 aaKnown RBP eCLIP29.71■■■□□ 2.352e-6■■□□□ 12.7
SDCCAG3-204ENST00000371725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.27■■■■■ 4.043e-7■■□□□ 12.6
SDCCAG3-204ENST00000371725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP32.11■■■□□ 2.731e-6■■□□□ 12.4
SDCCAG3-204ENST00000371725 DDX6P26196 483 aaKnown RBP eCLIP28.17■■■□□ 2.11e-6■■□□□ 12.2
SDCCAG3-204ENST00000371725 PRPF4O43172 522 aaKnown RBP eCLIP29.57■■■□□ 2.323e-7■■□□□ 12.1
SDCCAG3-204ENST00000371725 SRSF1Q07955 248 aaKnown RBP eCLIP22.95■■□□□ 1.262e-6■■□□□ 11.4
SDCCAG3-204ENST00000371725 ILF3Q12906 894 aaKnown RBP eCLIP26.77■■□□□ 1.881e-6■□□□□ 10.9
SDCCAG3-204ENST00000371725 U2AF2P26368 475 aaKnown RBP eCLIP32.41■■■□□ 2.788e-13■□□□□ 9.9
SDCCAG3-204ENST00000371725 GTF2F1P35269 517 aaKnown RBP eCLIP33.1■■■□□ 2.893e-7■□□□□ 9.7
SDCCAG3-204ENST00000371725 LSM11P83369 360 aaKnown RBP eCLIP26.31■■□□□ 1.82e-8■□□□□ 9.7
SDCCAG3-204ENST00000371725 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.72■■■□□ 2.358e-6■□□□□ 9
SDCCAG3-204ENST00000371725 GRSF1Q12849 480 aaKnown RBP eCLIP27.65■■■□□ 2.026e-6■□□□□ 8.8
SDCCAG3-204ENST00000371725 U2AF1Q01081 240 aaKnown RBP eCLIP36.94■■■■□ 3.55e-8■□□□□ 8.6
SDCCAG3-204ENST00000371725 HNRNPMP52272 730 aaKnown RBP eCLIP41.1■■■■■ 4.177e-6■□□□□ 8.4
SDCCAG3-204ENST00000371725 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.52■■■□□ 2.481e-10■□□□□ 8.4
Retrieved 43 of 43 RNA–protein pairs in 36.1 ms