RNA: ENST00000370554.5

SELENOF-202, Transcript of selenoprotein F, humanhuman

TSL 1 (best) BASIC

Gene SELENOF, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-202ENST00000370554 SF3B1O75533 1304 aaKnown RBP eCLIP20.75■□□□□ 0.911e-14■■■■■ 180.9
SELENOF-202ENST00000370554 PTBP1P26599 531 aaKnown RBP eCLIP14.03□□□□□ -0.162e-21■■■■■ 83.2
SELENOF-202ENST00000370554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.73■■□□□ 1.873e-11■■■■■ 36.9
SELENOF-202ENST00000370554 MATR3P43243 847 aaKnown RBP eCLIP20.53■□□□□ 0.882e-8■■■■■ 30.8
SELENOF-202ENST00000370554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.68■■□□□ 1.065e-8■■■■■ 30.2
SELENOF-202ENST00000370554 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.83■□□□□ 0.444e-9■■■■■ 29.8
SELENOF-202ENST00000370554 TIA1P31483 386 aaKnown RBP eCLIP17.02■□□□□ 0.326e-9■■■■■ 27
SELENOF-202ENST00000370554 QKIQ96PU8 341 aaKnown RBP eCLIP18.4■□□□□ 0.544e-10■■■■□ 26.4
SELENOF-202ENST00000370554 TARDBPQ13148 414 aaKnown RBP eCLIP19.24■□□□□ 0.673e-7■■■■□ 25.8
SELENOF-202ENST00000370554 RPS3P23396 243 aaKnown RBP eCLIP17.97■□□□□ 0.471e-10■■■■□ 23.5
SELENOF-202ENST00000370554 SND1Q7KZF4 910 aaKnown RBP eCLIP19.39■□□□□ 0.691e-8■■■■□ 22.9
SELENOF-202ENST00000370554 SUB1P53999 127 aaKnown RBP eCLIP13.73□□□□□ -0.219e-7■■■■□ 22.8
SELENOF-202ENST00000370554 UPF1Q92900 1129 aaKnown RBP eCLIP27.89■■■□□ 2.068e-9■■■■□ 22.2
SELENOF-202ENST00000370554 PABPC4Q13310 644 aaKnown RBP eCLIP22.98■■□□□ 1.272e-6■■■■□ 21.1
SELENOF-202ENST00000370554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.04■■■□□ 2.564e-8■■■■□ 19.7
SELENOF-202ENST00000370554 U2AF2P26368 475 aaKnown RBP eCLIP20.68■□□□□ 0.91e-10■■■■□ 19.5
SELENOF-202ENST00000370554 DDX6P26196 483 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■□□ 18.7
SELENOF-202ENST00000370554 PCBP2Q15366 365 aaKnown RBP eCLIP17.28■□□□□ 0.362e-8■■■□□ 18.6
SELENOF-202ENST00000370554 DDX3XO00571 662 aaKnown RBP eCLIP18.86■□□□□ 0.614e-16■■■□□ 16.5
SELENOF-202ENST00000370554 HNRNPMP52272 730 aaKnown RBP eCLIP30.32■■■□□ 2.443e-16■■■□□ 16.1
SELENOF-202ENST00000370554 KHSRPQ92945 711 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■■□□ 15.6
SELENOF-202ENST00000370554 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.41■□□□□ 0.541e-6■■■□□ 14.7
SELENOF-202ENST00000370554 EFTUD2Q15029 972 aaKnown RBP eCLIP17.45■□□□□ 0.383e-8■■□□□ 13.7
SELENOF-202ENST00000370554 YBX3P16989 372 aaKnown RBP eCLIP25.76■■□□□ 1.717e-7■■□□□ 13
SELENOF-202ENST00000370554 FTOQ9C0B1 505 aaKnown RBP eCLIP21.89■■□□□ 1.091e-9■■□□□ 12.7
SELENOF-202ENST00000370554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.5■■■□□ 2.318e-8■■□□□ 11.8
SELENOF-202ENST00000370554 LARP4Q71RC2 724 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■□□□ 11.6
SELENOF-202ENST00000370554 HNRNPLP14866 589 aaKnown RBP eCLIP19.94■□□□□ 0.782e-6■□□□□ 10.8
SELENOF-202ENST00000370554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.7■□□□□ 0.91e-18■□□□□ 10.6
SELENOF-202ENST00000370554 U2AF1Q01081 240 aaKnown RBP eCLIP25.18■■□□□ 1.621e-9■□□□□ 10.5
SELENOF-202ENST00000370554 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.96■□□□□ 0.317e-7■□□□□ 10.3
SELENOF-202ENST00000370554 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.15■■□□□ 1.149e-7■□□□□ 10.2
SELENOF-202ENST00000370554 TIAL1Q01085 375 aaKnown RBP eCLIP17.76■□□□□ 0.439e-7■□□□□ 9.8
SELENOF-202ENST00000370554 AGGF1Q8N302 714 aaeCLIP17.81■□□□□ 0.441e-6■□□□□ 9.1
Retrieved 34 of 34 RNA–protein pairs in 194.4 ms