RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 UPF1Q92900 1129 aaKnown RBP eCLIP15.23■□□□□ 0.031e-8■■■■■ 65.8
SLC39A1-204ENST00000368623 GRSF1Q12849 480 aaKnown RBP eCLIP14.72□□□□□ -0.054e-7■■■■■ 65.7
SLC39A1-204ENST00000368623 ZC3H11AO75152 810 aaKnown RBP eCLIP16.05■□□□□ 0.164e-7■■■■■ 41.2
SLC39A1-204ENST00000368623 FXR2P51116 673 aaKnown RBP eCLIP16.81■□□□□ 0.281e-8■■■■■ 32.1
SLC39A1-204ENST00000368623 SND1Q7KZF4 910 aaKnown RBP eCLIP16.68■□□□□ 0.265e-9■■■■■ 31.3
SLC39A1-204ENST00000368623 AKAP1Q92667 903 aaKnown RBP eCLIP14.01□□□□□ -0.174e-7■■■■■ 28
SLC39A1-204ENST00000368623 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.86□□□□□ -0.032e-8■■■■■ 27.4
SLC39A1-204ENST00000368623 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.082e-6■■■■■ 26.9
SLC39A1-204ENST00000368623 RPS3P23396 243 aaKnown RBP eCLIP14.77□□□□□ -0.043e-8■■■■□ 23.3
SLC39A1-204ENST00000368623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.55■□□□□ 0.886e-6■■■■□ 21.5
SLC39A1-204ENST00000368623 DDX3XO00571 662 aaKnown RBP eCLIP16.51■□□□□ 0.232e-8■■■■□ 21.2
SLC39A1-204ENST00000368623 PABPC4Q13310 644 aaKnown RBP eCLIP16.71■□□□□ 0.273e-8■■■■□ 20.9
SLC39A1-204ENST00000368623 TIA1P31483 386 aaKnown RBP eCLIP14.53□□□□□ -0.086e-7■■■□□ 18.9
SLC39A1-204ENST00000368623 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.15■□□□□ 0.181e-7■■■□□ 18.7
SLC39A1-204ENST00000368623 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.478e-6■■■□□ 15.3
SLC39A1-204ENST00000368623 LARP4Q71RC2 724 aaKnown RBP eCLIP15.11■□□□□ 0.018e-7■■■□□ 15.3
SLC39A1-204ENST00000368623 PCBP2Q15366 365 aaKnown RBP eCLIP14.84□□□□□ -0.034e-14■■□□□ 14.1
SLC39A1-204ENST00000368623 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.76□□□□□ -0.533e-9■■□□□ 13.8
SLC39A1-204ENST00000368623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.93■□□□□ 0.142e-13■■□□□ 12
SLC39A1-204ENST00000368623 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.42■□□□□ 0.224e-7■□□□□ 9
SLC39A1-204ENST00000368623 DDX6P26196 483 aaKnown RBP eCLIP14.39□□□□□ -0.116e-7■□□□□ 8.8
Retrieved 21 of 21 RNA–protein pairs in 21.3 ms