RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 UPF1Q92900 1129 aaKnown RBP eCLIP32.39■■■□□ 2.787e-36■■■■■ 108.3
EFNA1-202ENST00000368407 AKAP1Q92667 903 aaKnown RBP eCLIP24.59■■□□□ 1.531e-30■■■■■ 94.4
EFNA1-202ENST00000368407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.16■■■□□ 2.12e-9■■■■■ 53.1
EFNA1-202ENST00000368407 AQRO60306 1485 aaKnown RBP eCLIP42.35■■■■■ 4.371e-11■■■■■ 43.1
EFNA1-202ENST00000368407 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.98■■□□□ 1.593e-11■■■■■ 36.7
EFNA1-202ENST00000368407 DDX3XO00571 662 aaKnown RBP eCLIP28.35■■■□□ 2.134e-44■■■■■ 28.8
EFNA1-202ENST00000368407 FUBP3Q96I24 572 aaKnown RBP eCLIP27.01■■□□□ 1.918e-7■■■■□ 26.5
EFNA1-202ENST00000368407 GTF2F1P35269 517 aaKnown RBP eCLIP31.35■■■□□ 2.612e-7■■■■□ 25.7
EFNA1-202ENST00000368407 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.97■■■□□ 2.394e-16■■■■□ 22.4
EFNA1-202ENST00000368407 DDX6P26196 483 aaKnown RBP eCLIP26.53■■□□□ 1.843e-8■■■■□ 22.2
EFNA1-202ENST00000368407 SF3B4Q15427 424 aaKnown RBP eCLIP25.18■■□□□ 1.622e-8■■■■□ 21.9
EFNA1-202ENST00000368407 RBM15Q96T37 977 aaKnown RBP eCLIP27.65■■■□□ 2.022e-7■■■■□ 21.9
EFNA1-202ENST00000368407 PRPF4O43172 522 aaKnown RBP eCLIP27.77■■■□□ 2.042e-7■■■■□ 21.8
EFNA1-202ENST00000368407 YBX3P16989 372 aaKnown RBP eCLIP31.06■■■□□ 2.564e-11■■■■□ 20.7
EFNA1-202ENST00000368407 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.55■■■□□ 2.162e-7■■■■□ 20
EFNA1-202ENST00000368407 SND1Q7KZF4 910 aaKnown RBP eCLIP28.94■■■□□ 2.222e-9■■■■□ 20
EFNA1-202ENST00000368407 TAF15Q92804 592 aaKnown RBP eCLIP22.15■■□□□ 1.141e-7■■■■□ 19.7
EFNA1-202ENST00000368407 EFTUD2Q15029 972 aaKnown RBP eCLIP27.28■■□□□ 1.964e-7■■■□□ 16.9
EFNA1-202ENST00000368407 PPIGQ13427 754 aaKnown RBP eCLIP27.62■■■□□ 2.016e-9■■■□□ 16.3
EFNA1-202ENST00000368407 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.52■■□□□ 1.523e-14■■□□□ 14.3
EFNA1-202ENST00000368407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.93■□□□□ 0.945e-7■■□□□ 14.2
EFNA1-202ENST00000368407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.66■■■□□ 2.021e-6■■□□□ 14.2
EFNA1-202ENST00000368407 RPS3P23396 243 aaKnown RBP eCLIP25.53■■□□□ 1.689e-8■■□□□ 13.6
EFNA1-202ENST00000368407 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.49■■■□□ 2.152e-6■■□□□ 12.8
EFNA1-202ENST00000368407 PCBP1Q15365 356 aaKnown RBP eCLIP27.94■■■□□ 2.063e-6■■□□□ 12.4
EFNA1-202ENST00000368407 LARP4Q71RC2 724 aaKnown RBP eCLIP26.23■■□□□ 1.793e-9■■□□□ 12.3
EFNA1-202ENST00000368407 TIAL1Q01085 375 aaKnown RBP eCLIP25.92■■□□□ 1.742e-7■■□□□ 12.2
EFNA1-202ENST00000368407 SF3A3Q12874 501 aaKnown RBP eCLIP27.67■■■□□ 2.029e-7■■□□□ 11.8
EFNA1-202ENST00000368407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.87■■■■□ 3.653e-18■■□□□ 11.6
EFNA1-202ENST00000368407 CDC40O60508 579 aaKnown RBP eCLIP23.71■■□□□ 1.392e-6■■□□□ 11.4
EFNA1-202ENST00000368407 U2AF1Q01081 240 aaKnown RBP eCLIP34.13■■■■□ 3.052e-7■□□□□ 10
EFNA1-202ENST00000368407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.19■■■□□ 2.422e-11■□□□□ 10
EFNA1-202ENST00000368407 ZC3H11AO75152 810 aaKnown RBP eCLIP27.77■■■□□ 2.048e-7■□□□□ 9.9
EFNA1-202ENST00000368407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.73■■□□□ 1.558e-11■□□□□ 9.5
EFNA1-202ENST00000368407 NCBP2P52298 156 aaKnown RBP eCLIP24.4■■□□□ 1.54e-16■□□□□ 9.3
EFNA1-202ENST00000368407 U2AF2P26368 475 aaKnown RBP eCLIP30.56■■■□□ 2.481e-12■□□□□ 8.8
EFNA1-202ENST00000368407 G3BP1Q13283 466 aaKnown RBP eCLIP31.67■■■□□ 2.662e-6■□□□□ 8.8
EFNA1-202ENST00000368407 EIF3HO15372 352 aaKnown RBP eCLIP28.97■■■□□ 2.231e-9■□□□□ 8.8
EFNA1-202ENST00000368407 FTOQ9C0B1 505 aaKnown RBP eCLIP30.32■■■□□ 2.446e-12■□□□□ 8.2
EFNA1-202ENST00000368407 HNRNPUQ00839 825 aaKnown RBP eCLIP36.08■■■■□ 3.377e-6■□□□□ 8.2
Retrieved 40 of 40 RNA–protein pairs in 26.6 ms