RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 DDX3XO00571 662 aaKnown RBP eCLIP12.4□□□□□ -0.426e-16■■■■□ 22.4
TPR-201ENST00000367478 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.262e-14■■■□□ 18
TPR-201ENST00000367478 AGGF1Q8N302 714 aaeCLIP13.18□□□□□ -0.32e-11■■□□□ 12
TPR-201ENST00000367478 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.27□□□□□ -0.125e-11■■■□□ 16.6
TPR-201ENST00000367478 ZNF622Q969S3 477 aaKnown RBP eCLIP13.71□□□□□ -0.211e-10■■■□□ 15.6
TPR-201ENST00000367478 SRSF7Q16629 238 aaKnown RBP eCLIP10.39□□□□□ -0.752e-10■■■■■ 37.7
TPR-201ENST00000367478 LARP4Q71RC2 724 aaKnown RBP eCLIP11.71□□□□□ -0.547e-10■□□□□ 10.2
TPR-201ENST00000367478 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.38e-10■■□□□ 12.5
TPR-201ENST00000367478 SF3B4Q15427 424 aaKnown RBP eCLIP11.91□□□□□ -0.51e-9■■■■■ 32.8
TPR-201ENST00000367478 DDX6P26196 483 aaKnown RBP eCLIP12.34□□□□□ -0.435e-9■■□□□ 13.2
TPR-201ENST00000367478 NCBP2P52298 156 aaKnown RBP eCLIP12.15□□□□□ -0.461e-8■■■□□ 18.2
TPR-201ENST00000367478 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.621e-8■■■■□ 21.8
TPR-201ENST00000367478 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.122e-8■□□□□ 8.1
TPR-201ENST00000367478 CSTF2P33240 577 aaKnown RBP eCLIP12.25□□□□□ -0.452e-8■■■■□ 23.2
TPR-201ENST00000367478 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.21□□□□□ -0.293e-8■■■□□ 17.4
TPR-201ENST00000367478 PUM1Q14671 1186 aaKnown RBP eCLIP12.26□□□□□ -0.454e-8■■□□□ 13.7
TPR-201ENST00000367478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.144e-8■■■□□ 16.1
TPR-201ENST00000367478 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.547e-8■■■■■ 44.8
TPR-201ENST00000367478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.347e-8■■■■□ 20.8
TPR-201ENST00000367478 FMR1Q06787 632 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■■■■□ 24.1
TPR-201ENST00000367478 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.212e-7■■■■□ 19.9
TPR-201ENST00000367478 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.122e-7■□□□□ 10.9
TPR-201ENST00000367478 SAFBQ15424 915 aaKnown RBP eCLIP15.09■□□□□ 0.012e-7■□□□□ 9.3
TPR-201ENST00000367478 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.262e-7■□□□□ 10.1
TPR-201ENST00000367478 METAP2P50579 478 aaKnown RBP eCLIP14.09□□□□□ -0.153e-7■□□□□ 9.3
TPR-201ENST00000367478 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.45□□□□□ -0.423e-7■■■□□ 17
TPR-201ENST00000367478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.67□□□□□ -0.74e-7■■■■□ 22
TPR-201ENST00000367478 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.374e-7■■■■■ 41.2
TPR-201ENST00000367478 PPIGQ13427 754 aaKnown RBP eCLIP11.97□□□□□ -0.494e-7■■□□□ 13
TPR-201ENST00000367478 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.9□□□□□ -0.514e-7■■■■□ 23.2
TPR-201ENST00000367478 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■□□□□ 9.9
TPR-201ENST00000367478 FXR1P51114 621 aaKnown RBP eCLIP12.68□□□□□ -0.385e-7■■■□□ 19.1
TPR-201ENST00000367478 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.41□□□□□ -0.425e-7■■□□□ 11.7
TPR-201ENST00000367478 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.386e-7■■■■□ 21.5
TPR-201ENST00000367478 RBM15Q96T37 977 aaKnown RBP eCLIP12.99□□□□□ -0.336e-7■■■■□ 19.5
TPR-201ENST00000367478 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.066e-7■□□□□ 10.2
TPR-201ENST00000367478 TRA2AQ13595 282 aaKnown RBP eCLIP11.04□□□□□ -0.646e-7■■■■□ 19.4
TPR-201ENST00000367478 U2AF1Q01081 240 aaKnown RBP eCLIP15.25■□□□□ 0.036e-7■■■■□ 25.7
TPR-201ENST00000367478 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.95□□□□□ -0.57e-7■□□□□ 10
TPR-201ENST00000367478 SF3B1O75533 1304 aaKnown RBP eCLIP13.02□□□□□ -0.337e-7■■■■■ 52.4
TPR-201ENST00000367478 EIF3HO15372 352 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■□□□□ 10.7
TPR-201ENST00000367478 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.17e-7■■□□□ 12.9
TPR-201ENST00000367478 SRSF1Q07955 248 aaKnown RBP eCLIP10.64□□□□□ -0.718e-7■■■□□ 18.3
TPR-201ENST00000367478 YBX3P16989 372 aaKnown RBP eCLIP12.47□□□□□ -0.418e-7■□□□□ 10.7
TPR-201ENST00000367478 GPKOWQ92917 476 aaPredicted RBP eCLIP13.19□□□□□ -0.38e-7■■□□□ 12.8
TPR-201ENST00000367478 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.24□□□□□ -0.459e-7■■□□□ 14.1
TPR-201ENST00000367478 RBFOX2O43251 390 aaKnown RBP eCLIP11.04□□□□□ -0.649e-7■□□□□ 8.1
TPR-201ENST00000367478 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.559e-7■■■□□ 14.8
TPR-201ENST00000367478 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■■■□ 23.6
TPR-201ENST00000367478 EFTUD2Q15029 972 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■□□□ 11.4
TPR-201ENST00000367478 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■■■■□ 23.6
TPR-201ENST00000367478 CDC40O60508 579 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■□□□ 13.7
TPR-201ENST00000367478 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■■□ 26.4
TPR-201ENST00000367478 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■□ 24.2
TPR-201ENST00000367478 CPSF6Q16630 551 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■□□□□ 11.1
TPR-201ENST00000367478 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.57□□□□□ -0.083e-6■■■■□ 21.5
TPR-201ENST00000367478 QKIQ96PU8 341 aaKnown RBP eCLIP13.03□□□□□ -0.323e-6■■■■■ 41.9
TPR-201ENST00000367478 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.78□□□□□ -0.364e-6■□□□□ 8.9
TPR-201ENST00000367478 G3BP1Q13283 466 aaKnown RBP eCLIP14.91□□□□□ -0.025e-6■■□□□ 11.9
TPR-201ENST00000367478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.215e-6■■■□□ 14.8
TPR-201ENST00000367478 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.58□□□□□ -0.245e-6■■■■■ 37.8
TPR-201ENST00000367478 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.17□□□□□ -0.148e-6■□□□□ 8.8
TPR-201ENST00000367478 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.218e-6■□□□□ 9
TPR-201ENST00000367478 RPS3P23396 243 aaKnown RBP eCLIP12.1□□□□□ -0.478e-6■■□□□ 12.6
Retrieved 64 of 64 RNA–protein pairs in 49.8 ms