RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 DKC1O60832 514 aaKnown RBP eCLIP5.16□□□□□ -1.581e-242■■■■■ 180.2
RPL39-201ENST00000361575 SF3B1O75533 1304 aaKnown RBP eCLIP4.08□□□□□ -1.763e-6■■■■■ 137.9
RPL39-201ENST00000361575 NIPBLQ6KC79 2804 aaeCLIP-0.7□□□□□ -2.526e-29■■■■■ 94.3
RPL39-201ENST00000361575 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.86□□□□□ -1.151e-11■■■■■ 65.1
RPL39-201ENST00000361575 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.56□□□□□ -1.367e-28■■■■■ 59.5
RPL39-201ENST00000361575 AQRO60306 1485 aaKnown RBP eCLIP3.06□□□□□ -1.923e-9■■■■■ 39.9
RPL39-201ENST00000361575 PABPC4Q13310 644 aaKnown RBP eCLIP7.02□□□□□ -1.292e-7■■■■■ 29.6
RPL39-201ENST00000361575 RPS3P23396 243 aaKnown RBP eCLIP1.52□□□□□ -2.174e-7■■■■■ 29
RPL39-201ENST00000361575 LARP4Q71RC2 724 aaKnown RBP eCLIP6.13□□□□□ -1.431e-9■■■■□ 25.2
RPL39-201ENST00000361575 SUB1P53999 127 aaKnown RBP eCLIP3.45□□□□□ -1.866e-17■■■■□ 23.4
RPL39-201ENST00000361575 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.99□□□□□ -1.457e-9■■■■□ 22.6
RPL39-201ENST00000361575 NOLC1Q14978 699 aaKnown RBP eCLIP6.33□□□□□ -1.49e-79■■■■□ 21.4
RPL39-201ENST00000361575 IGF2BP3O00425 579 aaKnown RBP eCLIP6.81□□□□□ -1.328e-7■■■■□ 20.6
RPL39-201ENST00000361575 TIA1P31483 386 aaKnown RBP eCLIP4.72□□□□□ -1.653e-41■■■□□ 19.2
RPL39-201ENST00000361575 AATFQ9NY61 560 aaKnown RBP eCLIP4.11□□□□□ -1.757e-46■■□□□ 13.1
RPL39-201ENST00000361575 DDX3XO00571 662 aaKnown RBP eCLIP6.04□□□□□ -1.441e-65■■□□□ 13.1
RPL39-201ENST00000361575 AKAP1Q92667 903 aaKnown RBP eCLIP5.4□□□□□ -1.547e-7■■□□□ 13
RPL39-201ENST00000361575 METAP2P50579 478 aaKnown RBP eCLIP4.96□□□□□ -1.621e-6■■□□□ 12.8
RPL39-201ENST00000361575 YBX3P16989 372 aaKnown RBP eCLIP6.73□□□□□ -1.337e-18■■□□□ 11.5
RPL39-201ENST00000361575 SMNDC1O75940 238 aaKnown RBP eCLIP7.46□□□□□ -1.221e-323■□□□□ 11.1
RPL39-201ENST00000361575 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.71□□□□□ -1.822e-19■□□□□ 10.9
RPL39-201ENST00000361575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.73□□□□□ -1.499e-10■□□□□ 10.6
RPL39-201ENST00000361575 DDX21Q9NR30 783 aaKnown RBP eCLIP6.37□□□□□ -1.391e-46■□□□□ 10.1
RPL39-201ENST00000361575 PTBP1P26599 531 aaKnown RBP eCLIP3.85□□□□□ -1.792e-39■□□□□ 9.1
RPL39-201ENST00000361575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.41□□□□□ -1.542e-39■□□□□ 8.3
Retrieved 25 of 25 RNA–protein pairs in 17.5 ms