RNA: ENST00000350669.5

LDHB-201, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHB, Length 1,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-201ENST00000350669 PABPC4Q13310 644 aaKnown RBP eCLIP10.34□□□□□ -0.753e-34■■■□□ 16.5
LDHB-201ENST00000350669 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.44□□□□□ -1.224e-25■□□□□ 8.2
LDHB-201ENST00000350669 DDX3XO00571 662 aaKnown RBP eCLIP8.31□□□□□ -1.083e-24■■□□□ 13.5
LDHB-201ENST00000350669 TARDBPQ13148 414 aaKnown RBP eCLIP8.82□□□□□ -16e-22■■□□□ 12
LDHB-201ENST00000350669 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.452e-18■□□□□ 10
LDHB-201ENST00000350669 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.97e-14■■□□□ 11.7
LDHB-201ENST00000350669 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.471e-11■■□□□ 11.7
LDHB-201ENST00000350669 SND1Q7KZF4 910 aaKnown RBP eCLIP8.54□□□□□ -1.049e-11■□□□□ 10.5
LDHB-201ENST00000350669 SUB1P53999 127 aaKnown RBP eCLIP5.97□□□□□ -1.453e-10■■■■■ 197.9
LDHB-201ENST00000350669 EIF3GO75821 320 aaKnown RBP eCLIP5.73□□□□□ -1.494e-10■■□□□ 11.8
LDHB-201ENST00000350669 DDX6P26196 483 aaKnown RBP eCLIP8.89□□□□□ -0.996e-10■□□□□ 9.7
LDHB-201ENST00000350669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.13□□□□□ -1.112e-9■□□□□ 11.3
LDHB-201ENST00000350669 NIPBLQ6KC79 2804 aaeCLIP8.26□□□□□ -1.092e-9■■■□□ 15.3
LDHB-201ENST00000350669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.024e-9■■■■■ 31
LDHB-201ENST00000350669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.22□□□□□ -0.131e-8■■□□□ 12.6
LDHB-201ENST00000350669 PUM1Q14671 1186 aaKnown RBP eCLIP9.69□□□□□ -0.868e-8■□□□□ 10.2
LDHB-201ENST00000350669 HLTFQ14527 1009 aaKnown RBP eCLIP8.31□□□□□ -1.089e-8■■□□□ 12.4
LDHB-201ENST00000350669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.85□□□□□ -0.991e-7■■■■□ 20.3
LDHB-201ENST00000350669 NOLC1Q14978 699 aaKnown RBP eCLIP9.04□□□□□ -0.961e-7■■■■■ 32.7
LDHB-201ENST00000350669 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.46□□□□□ -1.062e-7■■□□□ 11.7
LDHB-201ENST00000350669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.63□□□□□ -1.193e-7■□□□□ 8
LDHB-201ENST00000350669 RPS3P23396 243 aaKnown RBP eCLIP7.88□□□□□ -1.153e-7■■■■■ 29.1
LDHB-201ENST00000350669 LARP4Q71RC2 724 aaKnown RBP eCLIP7.49□□□□□ -1.213e-7■■□□□ 11.4
LDHB-201ENST00000350669 SF3B1O75533 1304 aaKnown RBP eCLIP9.19□□□□□ -0.943e-7■■■■■ 63.6
LDHB-201ENST00000350669 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.04□□□□□ -1.125e-7■■■□□ 16.3
LDHB-201ENST00000350669 XRCC6P12956 609 aaKnown RBP eCLIP9.08□□□□□ -0.968e-7■■□□□ 11.8
LDHB-201ENST00000350669 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■□□ 16
LDHB-201ENST00000350669 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■■■■■ 37.1
LDHB-201ENST00000350669 PTBP1P26599 531 aaKnown RBP eCLIP6.11□□□□□ -1.431e-6■■■□□ 17.6
LDHB-201ENST00000350669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.85□□□□□ -0.832e-6■■□□□ 11.8
LDHB-201ENST00000350669 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.152e-6■■■□□ 15.2
LDHB-201ENST00000350669 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.94□□□□□ -0.823e-6■□□□□ 8.5
LDHB-201ENST00000350669 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.75□□□□□ -1.173e-6■■■■■ 74.3
LDHB-201ENST00000350669 RBFOX2O43251 390 aaKnown RBP eCLIP6.13□□□□□ -1.439e-6■■□□□ 11.7
Retrieved 34 of 34 RNA–protein pairs in 41.6 ms