RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
HERPUD1-202ENST00000344114 ABCC9O60706 1549 aa29.85■■■□□ 2.37
HERPUD1-202ENST00000344114 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
HERPUD1-202ENST00000344114 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.13
HERPUD1-202ENST00000344114 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
HERPUD1-202ENST00000344114 NACADO15069 1562 aa28.07■■■□□ 2.08
HERPUD1-202ENST00000344114 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.04
HERPUD1-202ENST00000344114 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
HERPUD1-202ENST00000344114 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
HERPUD1-202ENST00000344114 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
HERPUD1-202ENST00000344114 BICRAQ9NZM4 1560 aa27.55■■■□□ 2
HERPUD1-202ENST00000344114 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
HERPUD1-202ENST00000344114 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
HERPUD1-202ENST00000344114 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
HERPUD1-202ENST00000344114 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.91
HERPUD1-202ENST00000344114 CECR2Q9BXF3 1484 aa26.94■■□□□ 1.9
HERPUD1-202ENST00000344114 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
HERPUD1-202ENST00000344114 EIF4G1Q04637 1599 aaKnown RBP26.87■■□□□ 1.89
HERPUD1-202ENST00000344114 DNAJC5Q9H3Z4 198 aa26.23■■□□□ 1.79
HERPUD1-202ENST00000344114 CUX2O14529 1486 aa25.93■■□□□ 1.74
HERPUD1-202ENST00000344114 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
HERPUD1-202ENST00000344114 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
HERPUD1-202ENST00000344114 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
HERPUD1-202ENST00000344114 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
HERPUD1-202ENST00000344114 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
HERPUD1-202ENST00000344114 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
HERPUD1-202ENST00000344114 NESP48681 1621 aa25.57■■□□□ 1.68
HERPUD1-202ENST00000344114 BAZ1AQ9NRL2 1556 aaPredicted RBP25.49■■□□□ 1.67
HERPUD1-202ENST00000344114 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
HERPUD1-202ENST00000344114 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
HERPUD1-202ENST00000344114 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.67
HERPUD1-202ENST00000344114 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
HERPUD1-202ENST00000344114 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
HERPUD1-202ENST00000344114 MROH2BQ7Z745 1585 aa25.26■■□□□ 1.63
HERPUD1-202ENST00000344114 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.62
HERPUD1-202ENST00000344114 CADPSQ9ULU8 1353 aa25.06■■□□□ 1.6
HERPUD1-202ENST00000344114 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
HERPUD1-202ENST00000344114 WDR62O43379 1518 aa25.01■■□□□ 1.59
HERPUD1-202ENST00000344114 WIZO95785 1651 aa24.96■■□□□ 1.59
HERPUD1-202ENST00000344114 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
HERPUD1-202ENST00000344114 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
HERPUD1-202ENST00000344114 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
HERPUD1-202ENST00000344114 CFTRP13569 1480 aa24.74■■□□□ 1.55
HERPUD1-202ENST00000344114 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
HERPUD1-202ENST00000344114 URB2Q14146 1524 aaKnown RBP24.62■■□□□ 1.53
HERPUD1-202ENST00000344114 OSCARQ8IYS5 282 aa24.6■■□□□ 1.53
HERPUD1-202ENST00000344114 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
HERPUD1-202ENST00000344114 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
HERPUD1-202ENST00000344114 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
HERPUD1-202ENST00000344114 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
HERPUD1-202ENST00000344114 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
HERPUD1-202ENST00000344114 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
HERPUD1-202ENST00000344114 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
HERPUD1-202ENST00000344114 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
HERPUD1-202ENST00000344114 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
HERPUD1-202ENST00000344114 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
HERPUD1-202ENST00000344114 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
HERPUD1-202ENST00000344114 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
HERPUD1-202ENST00000344114 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
HERPUD1-202ENST00000344114 CHD1O14646 1710 aa24.15■■□□□ 1.46
HERPUD1-202ENST00000344114 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.45
HERPUD1-202ENST00000344114 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.444e-7■■■■■ 42.8
HERPUD1-202ENST00000344114 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
HERPUD1-202ENST00000344114 CYB5RLQ6IPT4 315 aa24.02■■□□□ 1.44
HERPUD1-202ENST00000344114 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
HERPUD1-202ENST00000344114 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
HERPUD1-202ENST00000344114 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
HERPUD1-202ENST00000344114 FBLN2P98095 1184 aa23.89■■□□□ 1.41
HERPUD1-202ENST00000344114 SOGA1O94964 1423 aa23.87■■□□□ 1.41
HERPUD1-202ENST00000344114 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
HERPUD1-202ENST00000344114 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
HERPUD1-202ENST00000344114 SNAPC4Q5SXM2 1469 aa23.84■■□□□ 1.41
HERPUD1-202ENST00000344114 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
HERPUD1-202ENST00000344114 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
HERPUD1-202ENST00000344114 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
HERPUD1-202ENST00000344114 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
HERPUD1-202ENST00000344114 CUX1P39880 1505 aa23.75■■□□□ 1.39
HERPUD1-202ENST00000344114 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
HERPUD1-202ENST00000344114 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
HERPUD1-202ENST00000344114 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
HERPUD1-202ENST00000344114 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
HERPUD1-202ENST00000344114 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
HERPUD1-202ENST00000344114 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
HERPUD1-202ENST00000344114 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.37
HERPUD1-202ENST00000344114 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
HERPUD1-202ENST00000344114 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
HERPUD1-202ENST00000344114 ERCC6L2Q5T890 1561 aa23.43■■□□□ 1.34
HERPUD1-202ENST00000344114 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
HERPUD1-202ENST00000344114 CEP170Q5SW79 1584 aa23.39■■□□□ 1.33
HERPUD1-202ENST00000344114 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.33
HERPUD1-202ENST00000344114 NUP160Q12769 1436 aa23.38■■□□□ 1.33
HERPUD1-202ENST00000344114 SHROOM2Q13796 1616 aa23.36■■□□□ 1.33
HERPUD1-202ENST00000344114 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
HERPUD1-202ENST00000344114 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
HERPUD1-202ENST00000344114 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
HERPUD1-202ENST00000344114 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
HERPUD1-202ENST00000344114 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
HERPUD1-202ENST00000344114 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
HERPUD1-202ENST00000344114 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
HERPUD1-202ENST00000344114 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms