RNA: ENST00000342222.6

IKBKB-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-201ENST00000342222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.9□□□□□ -0.341e-91■■■■■ 230.9
IKBKB-201ENST00000342222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.33□□□□□ -0.274e-9■■■■■ 126.2
IKBKB-201ENST00000342222 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.444e-6■■■■■ 108.7
IKBKB-201ENST00000342222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.06□□□□□ -0.325e-12■■■■■ 104.3
IKBKB-201ENST00000342222 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.62□□□□□ -0.552e-14■■■■■ 51.9
IKBKB-201ENST00000342222 SF3B4Q15427 424 aaKnown RBP eCLIP11.62□□□□□ -0.552e-6■■■■■ 50.5
IKBKB-201ENST00000342222 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.91□□□□□ -0.022e-7■■■■■ 44.1
IKBKB-201ENST00000342222 QKIQ96PU8 341 aaKnown RBP eCLIP12.38□□□□□ -0.437e-10■■■■■ 37.6
IKBKB-201ENST00000342222 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.222e-6■■■■■ 37.1
IKBKB-201ENST00000342222 G3BP1Q13283 466 aaKnown RBP eCLIP14.56□□□□□ -0.081e-8■■■■■ 32.6
IKBKB-201ENST00000342222 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.131e-7■■■■■ 31
IKBKB-201ENST00000342222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.85□□□□□ -0.831e-7■■■■■ 30.7
IKBKB-201ENST00000342222 U2AF2P26368 475 aaKnown RBP eCLIP14.18□□□□□ -0.147e-7■■■■■ 30.4
IKBKB-201ENST00000342222 PCBP2Q15366 365 aaKnown RBP eCLIP11.8□□□□□ -0.522e-7■■■■□ 26
IKBKB-201ENST00000342222 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.196e-6■■■■□ 25.1
IKBKB-201ENST00000342222 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.173e-7■■■■□ 24.6
IKBKB-201ENST00000342222 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.09□□□□□ -0.153e-6■■■■□ 24.2
IKBKB-201ENST00000342222 HNRNPKP61978 463 aaKnown RBP eCLIP10.88□□□□□ -0.675e-6■■■■□ 20.8
IKBKB-201ENST00000342222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■■□□ 18.1
IKBKB-201ENST00000342222 EIF3HO15372 352 aaKnown RBP eCLIP13.27□□□□□ -0.293e-7■■■□□ 17.9
IKBKB-201ENST00000342222 PPIGQ13427 754 aaKnown RBP eCLIP11.71□□□□□ -0.534e-7■■■□□ 17
IKBKB-201ENST00000342222 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.31e-7■■■□□ 15.9
IKBKB-201ENST00000342222 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.88□□□□□ -0.515e-7■■■□□ 15.2
IKBKB-201ENST00000342222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■■□□ 15
IKBKB-201ENST00000342222 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.264e-7■■□□□ 14.3
IKBKB-201ENST00000342222 HNRNPCP07910 306 aaKnown RBP eCLIP12.3□□□□□ -0.442e-7■■□□□ 13.4
IKBKB-201ENST00000342222 ZNF622Q969S3 477 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■□□□ 12.8
IKBKB-201ENST00000342222 SRSF1Q07955 248 aaKnown RBP eCLIP9.43□□□□□ -0.96e-7■■□□□ 12.4
IKBKB-201ENST00000342222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■□□□ 12.3
IKBKB-201ENST00000342222 PRPF4O43172 522 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■□□□ 11.9
IKBKB-201ENST00000342222 TIA1P31483 386 aaKnown RBP eCLIP11.65□□□□□ -0.549e-6■□□□□ 9.6
Retrieved 31 of 31 RNA–protein pairs in 17.1 ms