RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SUB1P53999 127 aaKnown RBP eCLIP10.74□□□□□ -0.691e-13■■■■■ 309.5
TUBA1B-201ENST00000332858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.6□□□□□ -0.078e-7■■■■■ 69.9
TUBA1B-201ENST00000332858 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.223e-6■■■■■ 66.2
TUBA1B-201ENST00000332858 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.89□□□□□ -0.351e-323■■■■■ 64.5
TUBA1B-201ENST00000332858 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■■■ 41.7
TUBA1B-201ENST00000332858 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.131e-19■■■■■ 40.2
TUBA1B-201ENST00000332858 DDX6P26196 483 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■■■■■ 38.6
TUBA1B-201ENST00000332858 IGF2BP3O00425 579 aaKnown RBP eCLIP14.13□□□□□ -0.152e-12■■■■■ 37.3
TUBA1B-201ENST00000332858 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.71e-8■■■■■ 35
TUBA1B-201ENST00000332858 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.596e-8■■■■■ 34.6
TUBA1B-201ENST00000332858 RBM22Q9NW64 420 aaKnown RBP eCLIP13.58□□□□□ -0.248e-8■■■■■ 31.5
TUBA1B-201ENST00000332858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.12□□□□□ -0.156e-16■■■■■ 31
TUBA1B-201ENST00000332858 NONOQ15233 471 aaKnown RBP eCLIP15.05■□□□□ -01e-6■■■■■ 27
TUBA1B-201ENST00000332858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■■■■□ 24.1
TUBA1B-201ENST00000332858 RPS3P23396 243 aaKnown RBP eCLIP13.13□□□□□ -0.312e-8■■■■□ 23.7
TUBA1B-201ENST00000332858 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.37□□□□□ -0.752e-14■■■■□ 23.1
TUBA1B-201ENST00000332858 METAP2P50579 478 aaKnown RBP eCLIP15.61■□□□□ 0.092e-11■■■■□ 22.7
TUBA1B-201ENST00000332858 PCBP1Q15365 356 aaKnown RBP eCLIP13.68□□□□□ -0.222e-11■■■■□ 20.8
TUBA1B-201ENST00000332858 DDX3XO00571 662 aaKnown RBP eCLIP14.67□□□□□ -0.062e-13■■■■□ 20.7
TUBA1B-201ENST00000332858 EFTUD2Q15029 972 aaKnown RBP eCLIP14.14□□□□□ -0.156e-7■■■■□ 20.6
TUBA1B-201ENST00000332858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.42□□□□□ -0.269e-23■■■□□ 19.1
TUBA1B-201ENST00000332858 TIA1P31483 386 aaKnown RBP eCLIP12.89□□□□□ -0.354e-6■■■□□ 18
TUBA1B-201ENST00000332858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.516e-33■■■□□ 18
TUBA1B-201ENST00000332858 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.174e-9■■■□□ 17.7
TUBA1B-201ENST00000332858 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.214e-15■■■□□ 16.6
TUBA1B-201ENST00000332858 SF3B4Q15427 424 aaKnown RBP eCLIP12.61□□□□□ -0.391e-8■■■□□ 15.9
TUBA1B-201ENST00000332858 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.99■□□□□ 0.154e-11■■■□□ 15.8
TUBA1B-201ENST00000332858 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.6□□□□□ -0.078e-11■■■□□ 15.8
TUBA1B-201ENST00000332858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.54□□□□□ -0.42e-6■■□□□ 14.5
TUBA1B-201ENST00000332858 LARP4Q71RC2 724 aaKnown RBP eCLIP13.45□□□□□ -0.262e-22■■□□□ 14.4
TUBA1B-201ENST00000332858 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■□□□ 13.8
TUBA1B-201ENST00000332858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.3■□□□□ 0.686e-10■■□□□ 13.6
TUBA1B-201ENST00000332858 NCBP2P52298 156 aaKnown RBP eCLIP12.67□□□□□ -0.385e-31■■□□□ 13.4
TUBA1B-201ENST00000332858 KHSRPQ92945 711 aaKnown RBP eCLIP13.99□□□□□ -0.173e-7■■□□□ 13.3
TUBA1B-201ENST00000332858 ZC3H11AO75152 810 aaKnown RBP eCLIP14.27□□□□□ -0.124e-12■■□□□ 12.6
TUBA1B-201ENST00000332858 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.022e-8■■□□□ 12.5
TUBA1B-201ENST00000332858 PABPC4Q13310 644 aaKnown RBP eCLIP14.81□□□□□ -0.042e-85■■□□□ 11.7
TUBA1B-201ENST00000332858 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.81□□□□□ -0.27e-7■□□□□ 11.1
TUBA1B-201ENST00000332858 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.9□□□□□ -0.342e-14■□□□□ 9.7
TUBA1B-201ENST00000332858 EIF3DO15371 548 aaKnown RBP eCLIP14.61□□□□□ -0.073e-28■□□□□ 9.4
TUBA1B-201ENST00000332858 SND1Q7KZF4 910 aaKnown RBP eCLIP14.78□□□□□ -0.043e-24■□□□□ 9.3
TUBA1B-201ENST00000332858 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.283e-9■□□□□ 8.9
TUBA1B-201ENST00000332858 PUM1Q14671 1186 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■□□□□ 8.9
TUBA1B-201ENST00000332858 U2AF2P26368 475 aaKnown RBP eCLIP15.52■□□□□ 0.081e-6■□□□□ 8.6
TUBA1B-201ENST00000332858 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.054e-9■□□□□ 8.2
Retrieved 45 of 45 RNA–protein pairs in 29.4 ms