RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NISCHQ9Y2I1 1504 aa47.17■■■■■ 5.14
SOX1-201ENST00000330949 HRCP23327 699 aa41.15■■■■■ 4.18
SOX1-201ENST00000330949 SHROOM4Q9ULL8 1493 aa41.03■■■■■ 4.16
SOX1-201ENST00000330949 SUPT5HO00267 1087 aaKnown RBP40.32■■■■■ 4.05
SOX1-201ENST00000330949 PELP1Q8IZL8 1130 aaKnown RBP40.21■■■■■ 4.03
SOX1-201ENST00000330949 PCGF6Q9BYE7 350 aa40.06■■■■■ 4
SOX1-201ENST00000330949 PPARGC1BQ86YN6 1023 aaKnown RBP39.97■■■■□ 3.99
SOX1-201ENST00000330949 DCAF8L2P0C7V8 631 aa39.93■■■■□ 3.98
SOX1-201ENST00000330949 MYO15BQ96JP2 1530 aa39.89■■■■□ 3.98
SOX1-201ENST00000330949 ZCCHC6Q5VYS8 1495 aaKnown RBP39.84■■■■□ 3.97
SOX1-201ENST00000330949 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
SOX1-201ENST00000330949 CHIC1Q5VXU3 224 aa39.65■■■■□ 3.94
SOX1-201ENST00000330949 DCAF1Q9Y4B6 1507 aa39.42■■■■□ 3.9
SOX1-201ENST00000330949 TRIM26Q12899 539 aaPredicted RBP38.95■■■■□ 3.83
SOX1-201ENST00000330949 SCAF1Q9H7N4 1312 aaKnown RBP38.88■■■■□ 3.81
SOX1-201ENST00000330949 ZEB1P37275 1124 aaPredicted RBP38.86■■■■□ 3.81
SOX1-201ENST00000330949 MYT1Q01538 1121 aa38.81■■■■□ 3.8
SOX1-201ENST00000330949 LOC105371045A0A1W2PR82 267 aa38.55■■■■□ 3.76
SOX1-201ENST00000330949 ACIN1Q9UKV3 1341 aaKnown RBP38.01■■■■□ 3.68
SOX1-201ENST00000330949 NEUROD1Q13562 356 aa37.77■■■■□ 3.64
SOX1-201ENST00000330949 SCRIBQ14160 1630 aa37.76■■■■□ 3.64
SOX1-201ENST00000330949 CENPBP07199 599 aaPredicted RBP37.63■■■■□ 3.61
SOX1-201ENST00000330949 GTF3C3Q9Y5Q9 886 aa37.61■■■■□ 3.61
SOX1-201ENST00000330949 ABCC9O60706 1549 aa37.54■■■■□ 3.6
SOX1-201ENST00000330949 RSF1Q96T23 1441 aaPredicted RBP37.47■■■■□ 3.59
SOX1-201ENST00000330949 EHMT2Q96KQ7 1210 aa37.46■■■■□ 3.59
SOX1-201ENST00000330949 FAM9AQ8IZU1 332 aaPredicted RBP37.41■■■■□ 3.58
SOX1-201ENST00000330949 DIEXFQ68CQ4 756 aaKnown RBP37.26■■■■□ 3.55
SOX1-201ENST00000330949 TRIM41Q8WV44 630 aa37.26■■■■□ 3.55
SOX1-201ENST00000330949 CCER1Q8TC90 406 aaPredicted RBP37.11■■■■□ 3.53
SOX1-201ENST00000330949 RB1CC1Q8TDY2 1594 aa37.1■■■■□ 3.53
SOX1-201ENST00000330949 CECR2Q9BXF3 1484 aa37.08■■■■□ 3.53
SOX1-201ENST00000330949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.05■■■■□ 3.52
SOX1-201ENST00000330949 NACADO15069 1562 aa36.88■■■■□ 3.49
SOX1-201ENST00000330949 MROH2BQ7Z745 1585 aa36.84■■■■□ 3.49
SOX1-201ENST00000330949 WIZO95785 1651 aa36.64■■■■□ 3.46
SOX1-201ENST00000330949 ZNF316A6NFI3 1004 aaPredicted RBP36.55■■■■□ 3.44
SOX1-201ENST00000330949 TTBK1Q5TCY1 1321 aaPredicted RBP36.47■■■■□ 3.43
SOX1-201ENST00000330949 YTHDC1Q96MU7 727 aaKnown RBP36.46■■■■□ 3.43
SOX1-201ENST00000330949 WRNQ14191 1432 aaPredicted RBP eCLIP36.2■■■■□ 3.39
SOX1-201ENST00000330949 MIER1Q8N108 512 aa36.2■■■■□ 3.39
SOX1-201ENST00000330949 CLSPNQ9HAW4 1339 aa36.14■■■■□ 3.38
SOX1-201ENST00000330949 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.38
SOX1-201ENST00000330949 PABPN1Q86U42 306 aaKnown RBP eCLIP36.07■■■■□ 3.37
SOX1-201ENST00000330949 ANP32EQ9BTT0 268 aa35.95■■■■□ 3.35
SOX1-201ENST00000330949 ABCC8Q09428 1581 aa35.94■■■■□ 3.34
SOX1-201ENST00000330949 UNC13AQ9UPW8 1703 aa35.91■■■■□ 3.34
SOX1-201ENST00000330949 CCDC88BA6NC98 1476 aa35.91■■■■□ 3.34
SOX1-201ENST00000330949 EIF4G1Q04637 1599 aaKnown RBP35.9■■■■□ 3.34
SOX1-201ENST00000330949 SMARCA4P51532 1647 aa35.89■■■■□ 3.34
SOX1-201ENST00000330949 BCL11AQ9H165 835 aa35.88■■■■□ 3.33
SOX1-201ENST00000330949 SUPT16HQ9Y5B9 1047 aaKnown RBP35.83■■■■□ 3.33
SOX1-201ENST00000330949 TOP2AP11388 1531 aaKnown RBP35.82■■■■□ 3.32
SOX1-201ENST00000330949 CEP162Q5TB80 1403 aa35.81■■■■□ 3.32
SOX1-201ENST00000330949 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
SOX1-201ENST00000330949 TSHZ2Q9NRE2 1034 aa35.69■■■■□ 3.3
SOX1-201ENST00000330949 SOGA1O94964 1423 aa35.64■■■■□ 3.3
SOX1-201ENST00000330949 TNIKQ9UKE5 1360 aa35.63■■■■□ 3.29
SOX1-201ENST00000330949 UBTFP17480 764 aaKnown RBP35.61■■■■□ 3.29
SOX1-201ENST00000330949 RUSC2Q8N2Y8 1516 aa35.53■■■■□ 3.28
SOX1-201ENST00000330949 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
SOX1-201ENST00000330949 CSRNP3Q8WYN3 585 aa35.4■■■■□ 3.26
SOX1-201ENST00000330949 HNRNPUL2Q1KMD3 747 aaKnown RBP35.36■■■■□ 3.25
SOX1-201ENST00000330949 RANGAP1P46060 587 aaPredicted RBP35.34■■■■□ 3.25
SOX1-201ENST00000330949 EEA1Q15075 1411 aa35.32■■■■□ 3.25
SOX1-201ENST00000330949 GOLGA3Q08378 1498 aa35.16■■■■□ 3.22
SOX1-201ENST00000330949 ATAD2BQ9ULI0 1458 aa35.06■■■■□ 3.2
SOX1-201ENST00000330949 PEG3Q9GZU2 1588 aa35.01■■■■□ 3.2
SOX1-201ENST00000330949 SYNJ1O43426 1573 aa35.01■■■■□ 3.19
SOX1-201ENST00000330949 BAZ1BQ9UIG0 1483 aaKnown RBP34.96■■■■□ 3.19
SOX1-201ENST00000330949 DHX57Q6P158 1386 aaKnown RBP34.88■■■■□ 3.17
SOX1-201ENST00000330949 VPS8Q8N3P4 1428 aa34.87■■■■□ 3.17
SOX1-201ENST00000330949 RBM19Q9Y4C8 960 aaKnown RBP34.86■■■■□ 3.17
SOX1-201ENST00000330949 APLP2Q06481 763 aa34.86■■■■□ 3.17
SOX1-201ENST00000330949 BCANQ96GW7 911 aa34.84■■■■□ 3.17
SOX1-201ENST00000330949 CLIP1P30622 1438 aa34.82■■■■□ 3.16
SOX1-201ENST00000330949 FKBP8Q14318 412 aa34.8■■■■□ 3.16
SOX1-201ENST00000330949 CEP164Q9UPV0 1460 aa34.8■■■■□ 3.16
SOX1-201ENST00000330949 KIF21BO75037 1637 aa34.75■■■■□ 3.15
SOX1-201ENST00000330949 RAPGEF2Q9Y4G8 1499 aa34.69■■■■□ 3.14
SOX1-201ENST00000330949 NEFLP07196 543 aa34.67■■■■□ 3.14
SOX1-201ENST00000330949 KCNH8Q96L42 1107 aa34.61■■■■□ 3.13
SOX1-201ENST00000330949 PRKCSHP14314 528 aaPredicted RBP34.51■■■■□ 3.12
SOX1-201ENST00000330949 MSH5O43196 834 aa34.47■■■■□ 3.11
SOX1-201ENST00000330949 FANCIQ9NVI1 1328 aa34.43■■■■□ 3.1
SOX1-201ENST00000330949 TOP2BQ02880 1626 aa34.4■■■■□ 3.1
SOX1-201ENST00000330949 MYT1LQ9UL68 1186 aa34.4■■■■□ 3.1
SOX1-201ENST00000330949 CUX2O14529 1486 aa34.38■■■■□ 3.09
SOX1-201ENST00000330949 ERICH6Q7L0X2 663 aa34.35■■■■□ 3.09
SOX1-201ENST00000330949 ITGAEP38570 1179 aa34.33■■■■□ 3.09
SOX1-201ENST00000330949 RRBP1Q9P2E9 1410 aaKnown RBP34.29■■■■□ 3.08
SOX1-201ENST00000330949 NCAPD3P42695 1498 aa34.27■■■■□ 3.08
SOX1-201ENST00000330949 KANK4Q5T7N3 995 aaPredicted RBP34.26■■■■□ 3.08
SOX1-201ENST00000330949 CUX1P39880 1505 aa34.24■■■■□ 3.07
SOX1-201ENST00000330949 CCER2I3L3R5 266 aa34.22■■■■□ 3.07
SOX1-201ENST00000330949 DDX10Q13206 875 aaKnown RBP34.21■■■■□ 3.07
SOX1-201ENST00000330949 BIVM-ERCC5R4GMW8 1640 aa34.19■■■■□ 3.06
SOX1-201ENST00000330949 PRXQ9BXM0 1461 aa34.16■■■■□ 3.06
SOX1-201ENST00000330949 CDK11AQ9UQ88 783 aaPredicted RBP34.15■■■■□ 3.06
SOX1-201ENST00000330949 TRIM52Q96A61 297 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms