RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 DDX3XO00571 662 aaKnown RBP eCLIP19.4■□□□□ 0.73e-20■■■■□ 20.3
PRKCB-202ENST00000321728 SRSF7Q16629 238 aaKnown RBP eCLIP15.24■□□□□ 0.038e-14■■■■■ 44.3
PRKCB-202ENST00000321728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.7■□□□□ 0.263e-11■■□□□ 12.1
PRKCB-202ENST00000321728 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.9■□□□□ 0.462e-10■■■■■ 82.5
PRKCB-202ENST00000321728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.48■□□□□ 0.718e-10■□□□□ 11.1
PRKCB-202ENST00000321728 PABPC4Q13310 644 aaKnown RBP eCLIP19.3■□□□□ 0.689e-10■■□□□ 11.7
PRKCB-202ENST00000321728 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.31e-9■■■□□ 16.9
PRKCB-202ENST00000321728 DDX6P26196 483 aaKnown RBP eCLIP16.34■□□□□ 0.211e-9■□□□□ 8.6
PRKCB-202ENST00000321728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.282e-9■□□□□ 11.3
PRKCB-202ENST00000321728 ZNF622Q969S3 477 aaKnown RBP eCLIP19.46■□□□□ 0.711e-8■□□□□ 8.3
PRKCB-202ENST00000321728 YBX3P16989 372 aaKnown RBP eCLIP18.06■□□□□ 0.481e-8■■■□□ 14.7
PRKCB-202ENST00000321728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.78■■□□□ 1.082e-8■■□□□ 13.7
PRKCB-202ENST00000321728 U2AF2P26368 475 aaKnown RBP eCLIP21.41■■□□□ 1.022e-8■■■■□ 22.1
PRKCB-202ENST00000321728 NOLC1Q14978 699 aaKnown RBP eCLIP21.67■■□□□ 1.063e-8■□□□□ 11.3
PRKCB-202ENST00000321728 SND1Q7KZF4 910 aaKnown RBP eCLIP20.05■□□□□ 0.83e-8■□□□□ 9.2
PRKCB-202ENST00000321728 SF3B4Q15427 424 aaKnown RBP eCLIP17.72■□□□□ 0.434e-8■□□□□ 8.6
PRKCB-202ENST00000321728 CPSF6Q16630 551 aaKnown RBP eCLIP17.37■□□□□ 0.374e-8■■□□□ 12.1
PRKCB-202ENST00000321728 LSM11P83369 360 aaKnown RBP eCLIP16.92■□□□□ 0.34e-8■■■■■ 27.9
PRKCB-202ENST00000321728 ILF3Q12906 894 aaKnown RBP eCLIP16.42■□□□□ 0.228e-8■■■■■ 37
PRKCB-202ENST00000321728 AGGF1Q8N302 714 aaeCLIP19.11■□□□□ 0.659e-8■■■■■ 28.5
PRKCB-202ENST00000321728 XRCC6P12956 609 aaKnown RBP eCLIP22.81■■□□□ 1.241e-7■■■■□ 19.5
PRKCB-202ENST00000321728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.89■□□□□ 0.621e-7■□□□□ 10.7
PRKCB-202ENST00000321728 GTF2F1P35269 517 aaKnown RBP eCLIP21.57■■□□□ 1.042e-7■■■■■ 36
PRKCB-202ENST00000321728 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.76■□□□□ 0.112e-7■■■■■ 28.8
PRKCB-202ENST00000321728 PTBP1P26599 531 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■■■■■ 42.7
PRKCB-202ENST00000321728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.332e-7■□□□□ 8.8
PRKCB-202ENST00000321728 EIF4G2P78344 907 aaKnown RBP eCLIP24.54■■□□□ 1.522e-7■■■■□ 19.3
PRKCB-202ENST00000321728 PCBP1Q15365 356 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■■■■ 34.6
PRKCB-202ENST00000321728 TARDBPQ13148 414 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■■□ 20.9
PRKCB-202ENST00000321728 HNRNPKP61978 463 aaKnown RBP eCLIP15.34■□□□□ 0.053e-7■■■■■ 30.6
PRKCB-202ENST00000321728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.85■□□□□ 0.933e-7■■□□□ 11.9
PRKCB-202ENST00000321728 HNRNPLP14866 589 aaKnown RBP eCLIP18.09■□□□□ 0.493e-7■■■□□ 19.2
PRKCB-202ENST00000321728 RBFOX2O43251 390 aaKnown RBP eCLIP15.05■□□□□ 04e-7■□□□□ 9.2
PRKCB-202ENST00000321728 SAFB2Q14151 953 aaKnown RBP eCLIP22.43■■□□□ 1.184e-7■■■■□ 20.4
PRKCB-202ENST00000321728 QKIQ96PU8 341 aaKnown RBP eCLIP18.26■□□□□ 0.515e-7■■■■■ 44.9
PRKCB-202ENST00000321728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.28■□□□□ 0.685e-7■□□□□ 8.9
PRKCB-202ENST00000321728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17■□□□□ 0.315e-7■■■■■ 29.2
PRKCB-202ENST00000321728 AARSP49588 968 aaKnown RBP eCLIP20.2■□□□□ 0.825e-7■■■■□ 20
PRKCB-202ENST00000321728 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.63■□□□□ 0.416e-7■■■□□ 15
PRKCB-202ENST00000321728 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.846e-7■■□□□ 14.3
PRKCB-202ENST00000321728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.557e-7■■■■■ 52.8
PRKCB-202ENST00000321728 FMR1Q06787 632 aaKnown RBP eCLIP20.45■□□□□ 0.867e-7■■□□□ 12.7
PRKCB-202ENST00000321728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.12■□□□□ 0.657e-7■■■■■ 84.3
PRKCB-202ENST00000321728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.85■■□□□ 1.257e-7■□□□□ 9.5
PRKCB-202ENST00000321728 HNRNPUQ00839 825 aaKnown RBP eCLIP24.94■■□□□ 1.589e-7■□□□□ 11
PRKCB-202ENST00000321728 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.23■□□□□ 0.359e-7■■□□□ 14.1
PRKCB-202ENST00000321728 SUB1P53999 127 aaKnown RBP eCLIP14.38□□□□□ -0.111e-6■■■■■ 29.9
PRKCB-202ENST00000321728 HNRNPMP52272 730 aaKnown RBP eCLIP23.47■■□□□ 1.351e-6■■■■□ 23.1
PRKCB-202ENST00000321728 FXR2P51116 673 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■■■□□ 16.4
PRKCB-202ENST00000321728 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.26■□□□□ 0.671e-6■■■■□ 24.5
PRKCB-202ENST00000321728 NONOQ15233 471 aaKnown RBP eCLIP19.63■□□□□ 0.731e-6■■□□□ 12.5
PRKCB-202ENST00000321728 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.521e-6■■■■■ 28
PRKCB-202ENST00000321728 LARP4Q71RC2 724 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■■■■□ 21.3
PRKCB-202ENST00000321728 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.12■□□□□ 0.331e-6■■□□□ 13.3
PRKCB-202ENST00000321728 METAP2P50579 478 aaKnown RBP eCLIP20.44■□□□□ 0.862e-6■□□□□ 10.7
PRKCB-202ENST00000321728 HNRNPA1P09651 372 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■□□□ 14.5
PRKCB-202ENST00000321728 MATR3P43243 847 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■■□ 22.2
PRKCB-202ENST00000321728 KHSRPQ92945 711 aaKnown RBP eCLIP18.19■□□□□ 0.52e-6■□□□□ 10.1
PRKCB-202ENST00000321728 RPS3P23396 243 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■■■■ 35.1
PRKCB-202ENST00000321728 FUSP35637 526 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■□□□□ 11
PRKCB-202ENST00000321728 TIA1P31483 386 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■■■□□ 16.9
PRKCB-202ENST00000321728 SAFBQ15424 915 aaKnown RBP eCLIP20.33■□□□□ 0.843e-6■■■□□ 15
PRKCB-202ENST00000321728 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.95■□□□□ 0.33e-6■■□□□ 13.5
PRKCB-202ENST00000321728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■■■■ 75.6
PRKCB-202ENST00000321728 SF3B1O75533 1304 aaKnown RBP eCLIP18.5■□□□□ 0.553e-6■■■■■ 63.8
PRKCB-202ENST00000321728 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.843e-6■■□□□ 13.6
PRKCB-202ENST00000321728 NIPBLQ6KC79 2804 aaeCLIP12.81□□□□□ -0.364e-6■■■□□ 14.9
PRKCB-202ENST00000321728 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.02■□□□□ 0.324e-6■■■■■ 36.3
PRKCB-202ENST00000321728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.71■□□□□ 0.754e-6■□□□□ 9.9
PRKCB-202ENST00000321728 FTOQ9C0B1 505 aaKnown RBP eCLIP20.96■□□□□ 0.955e-6■■■□□ 14.7
PRKCB-202ENST00000321728 HNRNPCP07910 306 aaKnown RBP eCLIP18.39■□□□□ 0.545e-6■■■□□ 16.3
PRKCB-202ENST00000321728 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.95e-6■■■■■ 29.2
PRKCB-202ENST00000321728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.08■□□□□ 0.487e-6■■□□□ 11.6
PRKCB-202ENST00000321728 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.598e-6■■□□□ 11.8
Retrieved 74 of 74 RNA–protein pairs in 89.6 ms