RNA: ENST00000318560.5

ABL1-201, Transcript of ABL proto-oncogene 1, non-receptor tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene ABL1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABL1-201ENST00000318560 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.93■■□□□ 1.583e-84■■■■■ 47.6
ABL1-201ENST00000318560 U2AF2P26368 475 aaKnown RBP eCLIP28.22■■■□□ 2.111e-18■■■□□ 18.6
ABL1-201ENST00000318560 HNRNPMP52272 730 aaKnown RBP eCLIP32.43■■■□□ 2.783e-12■■□□□ 12.8
ABL1-201ENST00000318560 PCBP2Q15366 365 aaKnown RBP eCLIP25.19■■□□□ 1.625e-11■■■■■ 48.3
ABL1-201ENST00000318560 QKIQ96PU8 341 aaKnown RBP eCLIP25.76■■□□□ 1.718e-11■□□□□ 10.5
ABL1-201ENST00000318560 GRSF1Q12849 480 aaKnown RBP eCLIP25.87■■□□□ 1.732e-10■■■■■ 35.9
ABL1-201ENST00000318560 MATR3P43243 847 aaKnown RBP eCLIP30.57■■■□□ 2.488e-10■□□□□ 9
ABL1-201ENST00000318560 PABPC4Q13310 644 aaKnown RBP eCLIP28.84■■■□□ 2.211e-9■■□□□ 12.6
ABL1-201ENST00000318560 EIF4G2P78344 907 aaKnown RBP eCLIP34.14■■■■□ 3.061e-9■■■■■ 34.6
ABL1-201ENST00000318560 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.19■■□□□ 1.782e-9■■□□□ 12.7
ABL1-201ENST00000318560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.33■■■□□ 2.132e-9■■□□□ 12
ABL1-201ENST00000318560 DDX6P26196 483 aaKnown RBP eCLIP25.54■■□□□ 1.684e-9■■□□□ 13
ABL1-201ENST00000318560 UPF1Q92900 1129 aaKnown RBP eCLIP25.9■■□□□ 1.746e-9■■■■■ 31.2
ABL1-201ENST00000318560 TIA1P31483 386 aaKnown RBP eCLIP24.78■■□□□ 1.561e-8■■■■□ 21.5
ABL1-201ENST00000318560 EFTUD2Q15029 972 aaKnown RBP eCLIP27.31■■□□□ 1.961e-8■■■■■ 41.9
ABL1-201ENST00000318560 PTBP1P26599 531 aaKnown RBP eCLIP23.29■■□□□ 1.321e-8■■■■■ 51.3
ABL1-201ENST00000318560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP31.26■■■□□ 2.594e-8■■■■■ 203.7
ABL1-201ENST00000318560 AKAP1Q92667 903 aaKnown RBP eCLIP24.77■■□□□ 1.564e-8■■■□□ 17.1
ABL1-201ENST00000318560 LARP4Q71RC2 724 aaKnown RBP eCLIP24.74■■□□□ 1.554e-8■■■□□ 16.4
ABL1-201ENST00000318560 NONOQ15233 471 aaKnown RBP eCLIP28.88■■■□□ 2.215e-8■■■■□ 22.9
ABL1-201ENST00000318560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.11■■□□□ 1.935e-8■■□□□ 14
ABL1-201ENST00000318560 YWHAGP61981 247 aaKnown RBP eCLIP28.12■■■□□ 2.098e-8■□□□□ 9.5
ABL1-201ENST00000318560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.11■■■■□ 3.218e-8■□□□□ 10.3
ABL1-201ENST00000318560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.39■■■□□ 2.38e-8■□□□□ 10.7
ABL1-201ENST00000318560 PUM1Q14671 1186 aaKnown RBP eCLIP25.38■■□□□ 1.659e-8■■■□□ 15.9
ABL1-201ENST00000318560 FTOQ9C0B1 505 aaKnown RBP eCLIP28.11■■■□□ 2.091e-7■□□□□ 8.2
ABL1-201ENST00000318560 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.85■■■□□ 2.691e-7■□□□□ 9.7
ABL1-201ENST00000318560 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.21■■□□□ 1.951e-7■□□□□ 11.3
ABL1-201ENST00000318560 HNRNPCP07910 306 aaKnown RBP eCLIP26.34■■□□□ 1.811e-7■■■■□ 20.5
ABL1-201ENST00000318560 METAP2P50579 478 aaKnown RBP eCLIP29.76■■■□□ 2.362e-7■■■□□ 18.2
ABL1-201ENST00000318560 YBX3P16989 372 aaKnown RBP eCLIP26.41■■□□□ 1.822e-7■■□□□ 12.7
ABL1-201ENST00000318560 DDX3XO00571 662 aaKnown RBP eCLIP26.06■■□□□ 1.763e-7■■■□□ 16.8
ABL1-201ENST00000318560 AQRO60306 1485 aaKnown RBP eCLIP30.93■■■□□ 2.543e-7■■■■■ 66.9
ABL1-201ENST00000318560 FXR2P51116 673 aaKnown RBP eCLIP26.86■■□□□ 1.893e-7■■■■□ 21.5
ABL1-201ENST00000318560 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.99■■■□□ 2.554e-7■■■■□ 24.9
ABL1-201ENST00000318560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.37■■■□□ 2.294e-7■■□□□ 12.9
ABL1-201ENST00000318560 FMR1Q06787 632 aaKnown RBP eCLIP26.75■■□□□ 1.875e-7■■■■□ 19.9
ABL1-201ENST00000318560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.34■■□□□ 1.975e-7■■□□□ 12.4
ABL1-201ENST00000318560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.69■□□□□ 0.95e-7■■■□□ 16.8
ABL1-201ENST00000318560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.19■■□□□ 1.946e-7■■■□□ 16.3
ABL1-201ENST00000318560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.77■■□□□ 1.566e-7■■□□□ 12.7
ABL1-201ENST00000318560 SF3B4Q15427 424 aaKnown RBP eCLIP24.84■■□□□ 1.576e-7■■■□□ 18.8
ABL1-201ENST00000318560 RBM15Q96T37 977 aaKnown RBP eCLIP26.96■■□□□ 1.916e-7■■□□□ 11.7
ABL1-201ENST00000318560 TARDBPQ13148 414 aaKnown RBP eCLIP25.29■■□□□ 1.646e-7■■□□□ 13.3
ABL1-201ENST00000318560 FXR1P51114 621 aaKnown RBP eCLIP26.67■■□□□ 1.869e-7■■■□□ 16.4
ABL1-201ENST00000318560 PCBP1Q15365 356 aaKnown RBP eCLIP26.26■■□□□ 1.791e-6■■■□□ 16.1
ABL1-201ENST00000318560 SF3B1O75533 1304 aaKnown RBP eCLIP26.39■■□□□ 1.822e-6■■■■■ 87.3
ABL1-201ENST00000318560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.28■■□□□ 1.642e-6■□□□□ 8.9
ABL1-201ENST00000318560 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.56■■□□□ 1.842e-6■■■■■ 31.4
ABL1-201ENST00000318560 SUB1P53999 127 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■■■□□ 15.9
ABL1-201ENST00000318560 PPIGQ13427 754 aaKnown RBP eCLIP26.07■■□□□ 1.762e-6■■□□□ 12.6
ABL1-201ENST00000318560 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.18■■□□□ 1.782e-6■■■□□ 14.6
ABL1-201ENST00000318560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.42■■□□□ 1.662e-6■□□□□ 8.8
ABL1-201ENST00000318560 EIF3HO15372 352 aaKnown RBP eCLIP26.43■■□□□ 1.823e-6■■■■□ 26.1
ABL1-201ENST00000318560 U2AF1Q01081 240 aaKnown RBP eCLIP32.8■■■□□ 2.843e-6■■■■□ 19.4
ABL1-201ENST00000318560 NIPBLQ6KC79 2804 aaeCLIP13.6□□□□□ -0.233e-6■■□□□ 13.3
ABL1-201ENST00000318560 GTF2F1P35269 517 aaKnown RBP eCLIP28.95■■■□□ 2.223e-6■■■■□ 19.8
ABL1-201ENST00000318560 AARSP49588 968 aaKnown RBP eCLIP27.32■■□□□ 1.963e-6■■■■■ 61.8
ABL1-201ENST00000318560 RBM22Q9NW64 420 aaKnown RBP eCLIP26.6■■□□□ 1.853e-6■■■■■ 32.5
ABL1-201ENST00000318560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.84■■■□□ 2.213e-6■■■■■ 31.2
ABL1-201ENST00000318560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.07■■□□□ 1.764e-6■□□□□ 8.5
ABL1-201ENST00000318560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.54■■■□□ 2.325e-6■■□□□ 12
ABL1-201ENST00000318560 NCBP2P52298 156 aaKnown RBP eCLIP25.41■■□□□ 1.666e-6■■■■□ 20.8
ABL1-201ENST00000318560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.26■■■□□ 2.116e-6■□□□□ 8.9
ABL1-201ENST00000318560 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.24■■□□□ 1.799e-6■■□□□ 13.2
Retrieved 65 of 65 RNA–protein pairs in 32.2 ms