RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 DKC1O60832 514 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■■■■■ 118
HNF4A-202ENST00000316673 PCBP1Q15365 356 aaKnown RBP eCLIP16.96■□□□□ 0.319e-10■■■■■ 50.5
HNF4A-202ENST00000316673 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.56e-7■■■■■ 42.5
HNF4A-202ENST00000316673 SRSF7Q16629 238 aaKnown RBP eCLIP12.95□□□□□ -0.341e-7■■■■■ 37.8
HNF4A-202ENST00000316673 QKIQ96PU8 341 aaKnown RBP eCLIP15.78■□□□□ 0.123e-10■■■■■ 33.1
HNF4A-202ENST00000316673 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■■■ 30.6
HNF4A-202ENST00000316673 TRA2AQ13595 282 aaKnown RBP eCLIP14.83□□□□□ -0.038e-7■■■■■ 29.7
HNF4A-202ENST00000316673 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.38■□□□□ 0.051e-6■■■■■ 28
HNF4A-202ENST00000316673 TIAL1Q01085 375 aaKnown RBP eCLIP15.08■□□□□ 0.018e-7■■■■■ 27.1
HNF4A-202ENST00000316673 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■■■■□ 26.7
HNF4A-202ENST00000316673 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.722e-7■■■■□ 26.1
HNF4A-202ENST00000316673 SAFBQ15424 915 aaKnown RBP eCLIP17.75■□□□□ 0.432e-7■■■■□ 25.5
HNF4A-202ENST00000316673 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.763e-7■■■■□ 25
HNF4A-202ENST00000316673 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.342e-10■■■■□ 23.7
HNF4A-202ENST00000316673 GTF2F1P35269 517 aaKnown RBP eCLIP16.25■□□□□ 0.194e-7■■■■□ 23.3
HNF4A-202ENST00000316673 PCBP2Q15366 365 aaKnown RBP eCLIP15□□□□□ -0.011e-6■■■■□ 23.1
HNF4A-202ENST00000316673 TIA1P31483 386 aaKnown RBP eCLIP14.67□□□□□ -0.062e-10■■■■□ 23
HNF4A-202ENST00000316673 PTBP1P26599 531 aaKnown RBP eCLIP13.29□□□□□ -0.282e-23■■■■□ 22.5
HNF4A-202ENST00000316673 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.14■□□□□ 0.171e-10■■■■□ 22
HNF4A-202ENST00000316673 PRPF4O43172 522 aaKnown RBP eCLIP15.34■□□□□ 0.054e-7■■■■□ 20.4
HNF4A-202ENST00000316673 HNRNPMP52272 730 aaKnown RBP eCLIP23.45■■□□□ 1.342e-6■■■■□ 20.4
HNF4A-202ENST00000316673 UPF1Q92900 1129 aaKnown RBP eCLIP20.5■□□□□ 0.871e-14■■■■□ 20.1
HNF4A-202ENST00000316673 FUBP3Q96I24 572 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■■■■□ 19.8
HNF4A-202ENST00000316673 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■■□ 19.7
HNF4A-202ENST00000316673 FTOQ9C0B1 505 aaKnown RBP eCLIP17.44■□□□□ 0.385e-7■■■■□ 19.6
HNF4A-202ENST00000316673 NCBP2P52298 156 aaKnown RBP eCLIP14.46□□□□□ -0.091e-9■■■□□ 18.7
HNF4A-202ENST00000316673 RBM15Q96T37 977 aaKnown RBP eCLIP15.65■□□□□ 0.13e-6■■■□□ 18.1
HNF4A-202ENST00000316673 KHSRPQ92945 711 aaKnown RBP eCLIP16■□□□□ 0.157e-7■■■□□ 18.1
HNF4A-202ENST00000316673 HNRNPLP14866 589 aaKnown RBP eCLIP15.69■□□□□ 0.14e-7■■■□□ 17.8
HNF4A-202ENST00000316673 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.81■□□□□ 0.282e-6■■■□□ 17.5
HNF4A-202ENST00000316673 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.513e-7■■■□□ 16.9
HNF4A-202ENST00000316673 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.053e-7■■■□□ 15.9
HNF4A-202ENST00000316673 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.42■□□□□ 0.063e-7■■■□□ 15.6
HNF4A-202ENST00000316673 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.75□□□□□ -0.372e-8■■■□□ 14.7
HNF4A-202ENST00000316673 FUSP35637 526 aaKnown RBP eCLIP9.91□□□□□ -0.822e-6■■■□□ 14.7
HNF4A-202ENST00000316673 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.95■□□□□ 0.147e-8■■□□□ 14.5
HNF4A-202ENST00000316673 NKRFO15226 690 aaKnown RBP eCLIP17.43■□□□□ 0.381e-6■■□□□ 13.9
HNF4A-202ENST00000316673 RBM5P52756 815 aaKnown RBP eCLIP18.55■□□□□ 0.567e-8■■□□□ 13.6
HNF4A-202ENST00000316673 SF3A3Q12874 501 aaKnown RBP eCLIP14.92□□□□□ -0.026e-14■■□□□ 13.3
HNF4A-202ENST00000316673 HNRNPKP61978 463 aaKnown RBP eCLIP15.17■□□□□ 0.021e-7■■□□□ 13.2
HNF4A-202ENST00000316673 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.46■□□□□ 0.232e-6■■□□□ 13.2
HNF4A-202ENST00000316673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.57e-6■■□□□ 13
HNF4A-202ENST00000316673 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.81■□□□□ 0.286e-10■■□□□ 12.9
HNF4A-202ENST00000316673 ILF3Q12906 894 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■■□□□ 12.7
HNF4A-202ENST00000316673 RBM22Q9NW64 420 aaKnown RBP eCLIP15.63■□□□□ 0.098e-7■■□□□ 12.1
HNF4A-202ENST00000316673 CDC40O60508 579 aaKnown RBP eCLIP14.01□□□□□ -0.175e-7■■□□□ 11.5
HNF4A-202ENST00000316673 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.873e-15■■□□□ 11.4
HNF4A-202ENST00000316673 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.82□□□□□ -0.048e-7■■□□□ 11.4
HNF4A-202ENST00000316673 SFPQP23246 707 aaKnown RBP eCLIP16.93■□□□□ 0.39e-7■□□□□ 11.3
HNF4A-202ENST00000316673 PPIGQ13427 754 aaKnown RBP eCLIP16.93■□□□□ 0.32e-14■□□□□ 10.9
HNF4A-202ENST00000316673 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■□□□□ 10.6
HNF4A-202ENST00000316673 EIF3DO15371 548 aaKnown RBP eCLIP16.94■□□□□ 0.33e-7■□□□□ 10.5
HNF4A-202ENST00000316673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.45■■□□□ 1.342e-7■□□□□ 10.3
HNF4A-202ENST00000316673 AGGF1Q8N302 714 aaeCLIP15.43■□□□□ 0.061e-7■□□□□ 10.1
HNF4A-202ENST00000316673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.251e-8■□□□□ 10
HNF4A-202ENST00000316673 DDX3XO00571 662 aaKnown RBP eCLIP16.34■□□□□ 0.211e-9■□□□□ 10
HNF4A-202ENST00000316673 G3BP1Q13283 466 aaKnown RBP eCLIP19■□□□□ 0.638e-9■□□□□ 9.7
HNF4A-202ENST00000316673 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.466e-8■□□□□ 9.7
HNF4A-202ENST00000316673 RPS3P23396 243 aaKnown RBP eCLIP15.22■□□□□ 0.033e-7■□□□□ 9.4
HNF4A-202ENST00000316673 HNRNPCP07910 306 aaKnown RBP eCLIP12.72□□□□□ -0.375e-6■□□□□ 9.3
HNF4A-202ENST00000316673 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.94■□□□□ 0.143e-6■□□□□ 9.3
HNF4A-202ENST00000316673 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.68□□□□□ -0.064e-7■□□□□ 9.2
HNF4A-202ENST00000316673 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■□□□□ 9.1
HNF4A-202ENST00000316673 U2AF2P26368 475 aaKnown RBP eCLIP17.63■□□□□ 0.411e-26■□□□□ 8.9
HNF4A-202ENST00000316673 HLTFQ14527 1009 aaKnown RBP eCLIP15.84■□□□□ 0.133e-7■□□□□ 8.9
HNF4A-202ENST00000316673 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.4■□□□□ 0.381e-6■□□□□ 8.5
Retrieved 66 of 66 RNA–protein pairs in 41.9 ms