RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 SF3A3Q12874 501 aaKnown RBP eCLIP15.83■□□□□ 0.121e-6■■■■■ 60.4
CALR-201ENST00000316448 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.242e-21■■■■■ 37.3
CALR-201ENST00000316448 EFTUD2Q15029 972 aaKnown RBP eCLIP16.06■□□□□ 0.164e-12■■■■■ 36.4
CALR-201ENST00000316448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.321e-7■■■■■ 36.2
CALR-201ENST00000316448 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.586e-25■■■■■ 35.5
CALR-201ENST00000316448 U2AF2P26368 475 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■■■ 35.1
CALR-201ENST00000316448 SF3B1O75533 1304 aaKnown RBP eCLIP16.41■□□□□ 0.226e-8■■■■■ 33.5
CALR-201ENST00000316448 PCBP1Q15365 356 aaKnown RBP eCLIP16.88■□□□□ 0.295e-69■■■■■ 31
CALR-201ENST00000316448 SMNDC1O75940 238 aaKnown RBP eCLIP14.96□□□□□ -0.027e-11■■■■■ 28.6
CALR-201ENST00000316448 TIA1P31483 386 aaKnown RBP eCLIP15.05■□□□□ -01e-29■■■■■ 27.8
CALR-201ENST00000316448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.372e-21■■■■■ 26.8
CALR-201ENST00000316448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.49□□□□□ -0.419e-10■■■■□ 25.3
CALR-201ENST00000316448 ILF3Q12906 894 aaKnown RBP eCLIP15.11■□□□□ 0.016e-7■■■■□ 23.8
CALR-201ENST00000316448 SF3B4Q15427 424 aaKnown RBP eCLIP13.6□□□□□ -0.231e-16■■■■□ 23.6
CALR-201ENST00000316448 U2AF1Q01081 240 aaKnown RBP eCLIP20.86■□□□□ 0.939e-17■■■■□ 23.3
CALR-201ENST00000316448 FTOQ9C0B1 505 aaKnown RBP eCLIP18.25■□□□□ 0.511e-10■■■■□ 21.5
CALR-201ENST00000316448 IGF2BP3O00425 579 aaKnown RBP eCLIP17.47■□□□□ 0.394e-12■■■■□ 20.3
CALR-201ENST00000316448 DDX3XO00571 662 aaKnown RBP eCLIP16.96■□□□□ 0.38e-89■■■□□ 19.2
CALR-201ENST00000316448 AQRO60306 1485 aaKnown RBP eCLIP25.05■■□□□ 1.64e-11■■■□□ 18.6
CALR-201ENST00000316448 TIAL1Q01085 375 aaKnown RBP eCLIP15.71■□□□□ 0.111e-13■■■□□ 18.4
CALR-201ENST00000316448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.57■□□□□ 0.247e-14■■■□□ 18.1
CALR-201ENST00000316448 HNRNPCP07910 306 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■■■□□ 17.6
CALR-201ENST00000316448 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.69■□□□□ 0.263e-22■■■□□ 17.1
CALR-201ENST00000316448 LARP4Q71RC2 724 aaKnown RBP eCLIP15.39■□□□□ 0.059e-32■■■□□ 16.9
CALR-201ENST00000316448 FXR1P51114 621 aaKnown RBP eCLIP17.33■□□□□ 0.372e-7■■■□□ 16.4
CALR-201ENST00000316448 RPS3P23396 243 aaKnown RBP eCLIP15.57■□□□□ 0.088e-23■■■□□ 16.4
CALR-201ENST00000316448 RBM22Q9NW64 420 aaKnown RBP eCLIP16.05■□□□□ 0.162e-6■■■□□ 16.2
CALR-201ENST00000316448 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.33■□□□□ 0.27e-19■■■□□ 15.4
CALR-201ENST00000316448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.461e-85■■□□□ 14.4
CALR-201ENST00000316448 PCBP2Q15366 365 aaKnown RBP eCLIP15.39■□□□□ 0.051e-37■■□□□ 14.2
CALR-201ENST00000316448 SRSF1Q07955 248 aaKnown RBP eCLIP13.05□□□□□ -0.321e-11■■□□□ 13.7
CALR-201ENST00000316448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.242e-20■■□□□ 13.6
CALR-201ENST00000316448 RBM15Q96T37 977 aaKnown RBP eCLIP16.24■□□□□ 0.196e-13■■□□□ 13.4
CALR-201ENST00000316448 ZNF622Q969S3 477 aaKnown RBP eCLIP18.78■□□□□ 0.65e-42■■□□□ 13
CALR-201ENST00000316448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.74■□□□□ 0.436e-16■■□□□ 12.8
CALR-201ENST00000316448 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.85■□□□□ 0.294e-7■■□□□ 12.6
CALR-201ENST00000316448 AKAP1Q92667 903 aaKnown RBP eCLIP13.6□□□□□ -0.238e-10■■□□□ 12.4
CALR-201ENST00000316448 YBX3P16989 372 aaKnown RBP eCLIP18.2■□□□□ 0.54e-26■■□□□ 12.4
CALR-201ENST00000316448 DDX42Q86XP3 938 aaKnown RBP eCLIP16.5■□□□□ 0.238e-7■■□□□ 12.3
CALR-201ENST00000316448 GPKOWQ92917 476 aaPredicted RBP eCLIP18.15■□□□□ 0.51e-9■■□□□ 12
CALR-201ENST00000316448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.42■■□□□ 1.346e-38■■□□□ 12
CALR-201ENST00000316448 FXR2P51116 673 aaKnown RBP eCLIP17.76■□□□□ 0.432e-38■■□□□ 11.7
CALR-201ENST00000316448 PRPF4O43172 522 aaKnown RBP eCLIP16.03■□□□□ 0.163e-7■■□□□ 11.4
CALR-201ENST00000316448 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.13□□□□□ -0.155e-17■■□□□ 11.4
CALR-201ENST00000316448 TROVE2P10155 538 aaKnown RBP eCLIP15.76■□□□□ 0.112e-23■□□□□ 11.2
CALR-201ENST00000316448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.81■□□□□ 0.123e-26■□□□□ 11.1
CALR-201ENST00000316448 NOLC1Q14978 699 aaKnown RBP eCLIP17.56■□□□□ 0.49e-26■□□□□ 10.6
CALR-201ENST00000316448 DDX6P26196 483 aaKnown RBP eCLIP15.95■□□□□ 0.143e-34■□□□□ 10.6
CALR-201ENST00000316448 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.964e-44■□□□□ 10.6
CALR-201ENST00000316448 G3BP1Q13283 466 aaKnown RBP eCLIP19.37■□□□□ 0.694e-13■□□□□ 10.6
CALR-201ENST00000316448 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.42e-18■□□□□ 10.5
CALR-201ENST00000316448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.19■□□□□ 0.182e-12■□□□□ 10.5
CALR-201ENST00000316448 PUM1Q14671 1186 aaKnown RBP eCLIP14.68□□□□□ -0.063e-20■□□□□ 10.2
CALR-201ENST00000316448 NIPBLQ6KC79 2804 aaeCLIP11.7□□□□□ -0.542e-9■□□□□ 10.2
CALR-201ENST00000316448 TRA2AQ13595 282 aaKnown RBP eCLIP14.58□□□□□ -0.083e-23■□□□□ 10
CALR-201ENST00000316448 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.56■□□□□ 0.081e-8■□□□□ 10
CALR-201ENST00000316448 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.49■□□□□ 0.079e-13■□□□□ 9.8
CALR-201ENST00000316448 PTBP1P26599 531 aaKnown RBP eCLIP13.94□□□□□ -0.185e-29■□□□□ 9.5
CALR-201ENST00000316448 FMR1Q06787 632 aaKnown RBP eCLIP17.84■□□□□ 0.456e-20■□□□□ 9.3
CALR-201ENST00000316448 SUB1P53999 127 aaKnown RBP eCLIP12.48□□□□□ -0.413e-41■□□□□ 9.2
CALR-201ENST00000316448 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.02■□□□□ 0.317e-18■□□□□ 9.1
CALR-201ENST00000316448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.15■□□□□ 0.823e-35■□□□□ 9
CALR-201ENST00000316448 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.073e-7■□□□□ 8.9
CALR-201ENST00000316448 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■□□□□ 8.8
CALR-201ENST00000316448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.68■■□□□ 1.382e-38■□□□□ 8.4
CALR-201ENST00000316448 RBM5P52756 815 aaKnown RBP eCLIP18.39■□□□□ 0.534e-26■□□□□ 8.3
CALR-201ENST00000316448 GRSF1Q12849 480 aaKnown RBP eCLIP15.47■□□□□ 0.074e-39■□□□□ 8.2
Retrieved 67 of 67 RNA–protein pairs in 37.8 ms