RNA: ENST00000305943.7

RNF187-201, Transcript of ring finger protein 187, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RNF187, Length 3,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF187-201ENST00000305943 SF3B1O75533 1304 aaKnown RBP eCLIP17.85■□□□□ 0.453e-6■■■■■ 78.2
RNF187-201ENST00000305943 DDX59Q5T1V6 619 aaKnown RBP eCLIP17■□□□□ 0.313e-6■■■■■ 44.3
RNF187-201ENST00000305943 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.63■□□□□ 0.411e-7■■■■■ 43.8
RNF187-201ENST00000305943 AQRO60306 1485 aaKnown RBP eCLIP23.92■■□□□ 1.424e-8■■■■■ 36.2
RNF187-201ENST00000305943 HNRNPKP61978 463 aaKnown RBP eCLIP14.92□□□□□ -0.021e-10■■■■■ 33.4
RNF187-201ENST00000305943 UPF1Q92900 1129 aaKnown RBP eCLIP16.93■□□□□ 0.31e-17■■■■■ 32.5
RNF187-201ENST00000305943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.18■■□□□ 1.141e-6■■■■■ 28.5
RNF187-201ENST00000305943 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.19■□□□□ 0.983e-7■■■■■ 28.3
RNF187-201ENST00000305943 DDX3XO00571 662 aaKnown RBP eCLIP18.86■□□□□ 0.617e-7■■■■■ 28.1
RNF187-201ENST00000305943 METAP2P50579 478 aaKnown RBP eCLIP19.91■□□□□ 0.785e-7■■■■□ 26.3
RNF187-201ENST00000305943 PCBP1Q15365 356 aaKnown RBP eCLIP16.84■□□□□ 0.292e-7■■■■□ 25.9
RNF187-201ENST00000305943 RPS3P23396 243 aaKnown RBP eCLIP16.57■□□□□ 0.241e-10■■■■□ 23
RNF187-201ENST00000305943 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.85■□□□□ 0.131e-14■■■■□ 22.6
RNF187-201ENST00000305943 PABPC4Q13310 644 aaKnown RBP eCLIP18.91■□□□□ 0.621e-9■■■■□ 22.5
RNF187-201ENST00000305943 AKAP1Q92667 903 aaKnown RBP eCLIP16.37■□□□□ 0.212e-18■■■■□ 22.2
RNF187-201ENST00000305943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.461e-7■■■■□ 19.4
RNF187-201ENST00000305943 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.02■□□□□ 0.488e-6■■■■□ 19.3
RNF187-201ENST00000305943 SF3B4Q15427 424 aaKnown RBP eCLIP17.17■□□□□ 0.342e-17■■■□□ 19
RNF187-201ENST00000305943 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.48■□□□□ 0.231e-7■■■□□ 17.2
RNF187-201ENST00000305943 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.55■□□□□ 0.246e-6■■■□□ 17
RNF187-201ENST00000305943 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.26■□□□□ 0.513e-6■■■□□ 17
RNF187-201ENST00000305943 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.32■□□□□ 0.22e-7■■■□□ 16.5
RNF187-201ENST00000305943 LARP4Q71RC2 724 aaKnown RBP eCLIP17.35■□□□□ 0.371e-16■■■□□ 16.3
RNF187-201ENST00000305943 DDX6P26196 483 aaKnown RBP eCLIP15.88■□□□□ 0.138e-7■■■□□ 15.8
RNF187-201ENST00000305943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.83■□□□□ 0.612e-9■■□□□ 13.3
RNF187-201ENST00000305943 PCBP2Q15366 365 aaKnown RBP eCLIP16.82■□□□□ 0.281e-9■■□□□ 13.3
RNF187-201ENST00000305943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.13■□□□□ 0.496e-8■■□□□ 12.9
RNF187-201ENST00000305943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■□□□ 12.5
RNF187-201ENST00000305943 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■■□□□ 12.2
RNF187-201ENST00000305943 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.381e-6■□□□□ 11.1
RNF187-201ENST00000305943 G3BP1Q13283 466 aaKnown RBP eCLIP20.44■□□□□ 0.863e-6■□□□□ 11.1
RNF187-201ENST00000305943 TIA1P31483 386 aaKnown RBP eCLIP16.5■□□□□ 0.231e-6■□□□□ 11
RNF187-201ENST00000305943 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.14■□□□□ 0.984e-8■□□□□ 10.5
RNF187-201ENST00000305943 AATFQ9NY61 560 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■□□□□ 10.4
RNF187-201ENST00000305943 FMR1Q06787 632 aaKnown RBP eCLIP19.94■□□□□ 0.781e-7■□□□□ 10.2
RNF187-201ENST00000305943 FXR2P51116 673 aaKnown RBP eCLIP18.86■□□□□ 0.615e-10■□□□□ 10.2
RNF187-201ENST00000305943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.361e-7■□□□□ 9
Retrieved 37 of 37 RNA–protein pairs in 207.7 ms