RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.227e-7■■■■■ 84.3
PRKCB-201ENST00000303531 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.91□□□□□ -0.022e-10■■■■■ 82.5
PRKCB-201ENST00000303531 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.98□□□□□ -0.173e-6■■■■■ 75.6
PRKCB-201ENST00000303531 SF3B1O75533 1304 aaKnown RBP eCLIP14.02□□□□□ -0.173e-6■■■■■ 63.8
PRKCB-201ENST00000303531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.49■□□□□ 0.237e-7■■■■■ 52.8
PRKCB-201ENST00000303531 QKIQ96PU8 341 aaKnown RBP eCLIP13.93□□□□□ -0.185e-7■■■■■ 44.9
PRKCB-201ENST00000303531 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.568e-14■■■■■ 44.3
PRKCB-201ENST00000303531 PTBP1P26599 531 aaKnown RBP eCLIP12.8□□□□□ -0.362e-7■■■■■ 42.7
PRKCB-201ENST00000303531 ILF3Q12906 894 aaKnown RBP eCLIP13.67□□□□□ -0.228e-8■■■■■ 37
PRKCB-201ENST00000303531 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.33□□□□□ -0.284e-6■■■■■ 36.3
PRKCB-201ENST00000303531 GTF2F1P35269 517 aaKnown RBP eCLIP15.99■□□□□ 0.152e-7■■■■■ 36
PRKCB-201ENST00000303531 RPS3P23396 243 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■■■■ 35.1
PRKCB-201ENST00000303531 PCBP1Q15365 356 aaKnown RBP eCLIP14.03□□□□□ -0.162e-7■■■■■ 34.6
PRKCB-201ENST00000303531 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■■ 30.6
PRKCB-201ENST00000303531 SUB1P53999 127 aaKnown RBP eCLIP12.58□□□□□ -0.41e-6■■■■■ 29.9
PRKCB-201ENST00000303531 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.535e-6■■■■■ 29.2
PRKCB-201ENST00000303531 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.21□□□□□ -0.295e-7■■■■■ 29.2
PRKCB-201ENST00000303531 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■■ 28.8
PRKCB-201ENST00000303531 AGGF1Q8N302 714 aaeCLIP14.63□□□□□ -0.079e-8■■■■■ 28.5
PRKCB-201ENST00000303531 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■■■■■ 28
PRKCB-201ENST00000303531 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.444e-8■■■■■ 27.9
PRKCB-201ENST00000303531 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.7□□□□□ -0.061e-6■■■■□ 24.5
PRKCB-201ENST00000303531 HNRNPMP52272 730 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■■□ 23.1
PRKCB-201ENST00000303531 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.182e-6■■■■□ 22.2
PRKCB-201ENST00000303531 U2AF2P26368 475 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■■■□ 22.1
PRKCB-201ENST00000303531 LARP4Q71RC2 724 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■■□ 21.3
PRKCB-201ENST00000303531 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.223e-7■■■■□ 20.9
PRKCB-201ENST00000303531 SAFB2Q14151 953 aaKnown RBP eCLIP17.82■□□□□ 0.444e-7■■■■□ 20.4
PRKCB-201ENST00000303531 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.113e-20■■■■□ 20.3
PRKCB-201ENST00000303531 AARSP49588 968 aaKnown RBP eCLIP14.7□□□□□ -0.065e-7■■■■□ 20
PRKCB-201ENST00000303531 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.151e-7■■■■□ 19.5
PRKCB-201ENST00000303531 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.572e-7■■■■□ 19.3
PRKCB-201ENST00000303531 HNRNPLP14866 589 aaKnown RBP eCLIP14.05□□□□□ -0.163e-7■■■□□ 19.2
PRKCB-201ENST00000303531 TIA1P31483 386 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■□□ 16.9
PRKCB-201ENST00000303531 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.21e-9■■■□□ 16.9
PRKCB-201ENST00000303531 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■■■□□ 16.4
PRKCB-201ENST00000303531 HNRNPCP07910 306 aaKnown RBP eCLIP14.5□□□□□ -0.095e-6■■■□□ 16.3
PRKCB-201ENST00000303531 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.11□□□□□ -0.156e-7■■■□□ 15
PRKCB-201ENST00000303531 SAFBQ15424 915 aaKnown RBP eCLIP16.82■□□□□ 0.283e-6■■■□□ 15
PRKCB-201ENST00000303531 NIPBLQ6KC79 2804 aaeCLIP7.67□□□□□ -1.184e-6■■■□□ 14.9
PRKCB-201ENST00000303531 FTOQ9C0B1 505 aaKnown RBP eCLIP15.28■□□□□ 0.045e-6■■■□□ 14.7
PRKCB-201ENST00000303531 YBX3P16989 372 aaKnown RBP eCLIP14.23□□□□□ -0.131e-8■■■□□ 14.7
PRKCB-201ENST00000303531 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■■□□□ 14.5
PRKCB-201ENST00000303531 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.57■□□□□ 0.246e-7■■□□□ 14.3
PRKCB-201ENST00000303531 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.21□□□□□ -0.139e-7■■□□□ 14.1
PRKCB-201ENST00000303531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.81■□□□□ 0.122e-8■■□□□ 13.7
PRKCB-201ENST00000303531 FXR1P51114 621 aaKnown RBP eCLIP14.78□□□□□ -0.043e-6■■□□□ 13.6
PRKCB-201ENST00000303531 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■■□□□ 13.5
PRKCB-201ENST00000303531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.43□□□□□ -0.261e-6■■□□□ 13.3
PRKCB-201ENST00000303531 FMR1Q06787 632 aaKnown RBP eCLIP14.83□□□□□ -0.047e-7■■□□□ 12.7
PRKCB-201ENST00000303531 NONOQ15233 471 aaKnown RBP eCLIP15.56■□□□□ 0.081e-6■■□□□ 12.5
PRKCB-201ENST00000303531 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.293e-11■■□□□ 12.1
PRKCB-201ENST00000303531 CPSF6Q16630 551 aaKnown RBP eCLIP13.99□□□□□ -0.174e-8■■□□□ 12.1
PRKCB-201ENST00000303531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.95■□□□□ 0.143e-7■■□□□ 11.9
PRKCB-201ENST00000303531 ZC3H11AO75152 810 aaKnown RBP eCLIP14.46□□□□□ -0.18e-6■■□□□ 11.8
PRKCB-201ENST00000303531 PABPC4Q13310 644 aaKnown RBP eCLIP15.24■□□□□ 0.039e-10■■□□□ 11.7
PRKCB-201ENST00000303531 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.49□□□□□ -0.097e-6■■□□□ 11.6
PRKCB-201ENST00000303531 NOLC1Q14978 699 aaKnown RBP eCLIP15.98■□□□□ 0.153e-8■□□□□ 11.3
PRKCB-201ENST00000303531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.3□□□□□ -0.62e-9■□□□□ 11.3
PRKCB-201ENST00000303531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.57□□□□□ -0.088e-10■□□□□ 11.1
PRKCB-201ENST00000303531 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.639e-7■□□□□ 11
PRKCB-201ENST00000303531 FUSP35637 526 aaKnown RBP eCLIP10.65□□□□□ -0.712e-6■□□□□ 11
PRKCB-201ENST00000303531 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■□□□□ 10.7
PRKCB-201ENST00000303531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.44□□□□□ -0.11e-7■□□□□ 10.7
PRKCB-201ENST00000303531 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.332e-6■□□□□ 10.1
PRKCB-201ENST00000303531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.38□□□□□ -0.114e-6■□□□□ 9.9
PRKCB-201ENST00000303531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■□□□□ 9.5
PRKCB-201ENST00000303531 SND1Q7KZF4 910 aaKnown RBP eCLIP15.47■□□□□ 0.073e-8■□□□□ 9.2
PRKCB-201ENST00000303531 RBFOX2O43251 390 aaKnown RBP eCLIP11.76□□□□□ -0.534e-7■□□□□ 9.2
PRKCB-201ENST00000303531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.83■□□□□ 0.135e-7■□□□□ 8.9
PRKCB-201ENST00000303531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.592e-7■□□□□ 8.8
PRKCB-201ENST00000303531 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.221e-9■□□□□ 8.6
PRKCB-201ENST00000303531 SF3B4Q15427 424 aaKnown RBP eCLIP12.89□□□□□ -0.354e-8■□□□□ 8.6
PRKCB-201ENST00000303531 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.131e-8■□□□□ 8.3
Retrieved 74 of 74 RNA–protein pairs in 262.1 ms