RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PABPC4Q13310 644 aaKnown RBP eCLIP16.34■□□□□ 0.213e-13■■■□□ 15.3
SEC16A-202ENST00000290037 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.464e-12■■■□□ 17.4
SEC16A-202ENST00000290037 DDX3XO00571 662 aaKnown RBP eCLIP14.93□□□□□ -0.027e-12■□□□□ 9.7
SEC16A-202ENST00000290037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.33■□□□□ 0.29e-10■■■■■ 79.8
SEC16A-202ENST00000290037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.331e-9■■■■□ 19.8
SEC16A-202ENST00000290037 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.044e-9■■■■■ 28.4
SEC16A-202ENST00000290037 TARDBPQ13148 414 aaKnown RBP eCLIP14.36□□□□□ -0.111e-8■■■■■ 27.7
SEC16A-202ENST00000290037 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■■■ 34.1
SEC16A-202ENST00000290037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.37■□□□□ 0.214e-8■■□□□ 11.8
SEC16A-202ENST00000290037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.44□□□□□ -0.265e-8■■■■□ 20.8
SEC16A-202ENST00000290037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.62■□□□□ 0.255e-8■□□□□ 9.5
SEC16A-202ENST00000290037 SUB1P53999 127 aaKnown RBP eCLIP13.73□□□□□ -0.216e-8■■■□□ 14.9
SEC16A-202ENST00000290037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.98□□□□□ -0.177e-8■■■■□ 21.8
SEC16A-202ENST00000290037 EIF3HO15372 352 aaKnown RBP eCLIP15.64■□□□□ 0.097e-8■■■■□ 24.6
SEC16A-202ENST00000290037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.99■□□□□ 0.151e-7■□□□□ 11.2
SEC16A-202ENST00000290037 TIA1P31483 386 aaKnown RBP eCLIP14.28□□□□□ -0.121e-7■□□□□ 9.1
SEC16A-202ENST00000290037 UPF1Q92900 1129 aaKnown RBP eCLIP14.58□□□□□ -0.081e-7■■■■□ 26.7
SEC16A-202ENST00000290037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.2■□□□□ 0.021e-7■■■■■ 29.2
SEC16A-202ENST00000290037 PCBP2Q15366 365 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■■■■ 30.1
SEC16A-202ENST00000290037 SF3A3Q12874 501 aaKnown RBP eCLIP15.02□□□□□ -0.012e-7■■■■□ 20.3
SEC16A-202ENST00000290037 U2AF2P26368 475 aaKnown RBP eCLIP15.91■□□□□ 0.142e-7■□□□□ 9.8
SEC16A-202ENST00000290037 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.362e-7■■□□□ 12.8
SEC16A-202ENST00000290037 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.542e-7■■■■■ 36.4
SEC16A-202ENST00000290037 RPS3P23396 243 aaKnown RBP eCLIP14.39□□□□□ -0.112e-7■■□□□ 13.2
SEC16A-202ENST00000290037 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.84■□□□□ 0.133e-7■■□□□ 12.5
SEC16A-202ENST00000290037 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.423e-7■■■□□ 14.7
SEC16A-202ENST00000290037 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.24■□□□□ 0.033e-7■□□□□ 9.2
SEC16A-202ENST00000290037 ZRANB2O95218 330 aaKnown RBP eCLIP15.8■□□□□ 0.123e-7■■□□□ 14
SEC16A-202ENST00000290037 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■□□□□ 8.4
SEC16A-202ENST00000290037 SF3B1O75533 1304 aaKnown RBP eCLIP15.34■□□□□ 0.054e-7■■■■■ 122.3
SEC16A-202ENST00000290037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.435e-7■■■■□ 20
SEC16A-202ENST00000290037 YBX3P16989 372 aaKnown RBP eCLIP14.87□□□□□ -0.035e-7■■□□□ 14.2
SEC16A-202ENST00000290037 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.16e-7■■■□□ 16.6
SEC16A-202ENST00000290037 PPIGQ13427 754 aaKnown RBP eCLIP14.61□□□□□ -0.077e-7■■□□□ 13.4
SEC16A-202ENST00000290037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.337e-7■■■■■ 77.4
SEC16A-202ENST00000290037 QKIQ96PU8 341 aaKnown RBP eCLIP14.94□□□□□ -0.028e-7■■■■□ 24.2
SEC16A-202ENST00000290037 HLTFQ14527 1009 aaKnown RBP eCLIP16.68■□□□□ 0.269e-7■■■□□ 15.3
SEC16A-202ENST00000290037 RBM15Q96T37 977 aaKnown RBP eCLIP15.48■□□□□ 0.071e-6■■■■□ 22.4
SEC16A-202ENST00000290037 SF3B4Q15427 424 aaKnown RBP eCLIP14.36□□□□□ -0.111e-6■■■■□ 25.8
SEC16A-202ENST00000290037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.241e-6■■■□□ 16.9
SEC16A-202ENST00000290037 EFTUD2Q15029 972 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■■■□□ 18.7
SEC16A-202ENST00000290037 FMR1Q06787 632 aaKnown RBP eCLIP15.25■□□□□ 0.031e-6■■■■□ 20.1
SEC16A-202ENST00000290037 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■■□□□ 12.7
SEC16A-202ENST00000290037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■□□□ 12.4
SEC16A-202ENST00000290037 HNRNPCP07910 306 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■□□ 16.1
SEC16A-202ENST00000290037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.92■□□□□ 0.622e-6■■□□□ 11.6
SEC16A-202ENST00000290037 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.442e-6■■■□□ 18.6
SEC16A-202ENST00000290037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■■□□□ 11.5
SEC16A-202ENST00000290037 CDC40O60508 579 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■□□□□ 8.5
SEC16A-202ENST00000290037 PRPF4O43172 522 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■□□ 19
SEC16A-202ENST00000290037 ZNF622Q969S3 477 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■□□□□ 10.3
SEC16A-202ENST00000290037 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■■■□□ 18.9
SEC16A-202ENST00000290037 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■□□□□ 8.6
SEC16A-202ENST00000290037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.02■□□□□ -03e-6■■■■■ 69.6
SEC16A-202ENST00000290037 LSM11P83369 360 aaKnown RBP eCLIP12.9□□□□□ -0.343e-6■■■■■ 27
SEC16A-202ENST00000290037 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.33e-6■■■■□ 23.7
SEC16A-202ENST00000290037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.64■□□□□ 0.254e-6■■■□□ 15.6
SEC16A-202ENST00000290037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.234e-6■■■■■ 58.9
SEC16A-202ENST00000290037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.574e-6■□□□□ 10.3
SEC16A-202ENST00000290037 ZC3H11AO75152 810 aaKnown RBP eCLIP15.74■□□□□ 0.114e-6■□□□□ 9.6
SEC16A-202ENST00000290037 RBM22Q9NW64 420 aaKnown RBP eCLIP14.96□□□□□ -0.015e-6■■■■□ 23.7
SEC16A-202ENST00000290037 HNRNPKP61978 463 aaKnown RBP eCLIP14.1□□□□□ -0.155e-6■■■■□ 19.6
SEC16A-202ENST00000290037 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.296e-6■■■□□ 17.4
SEC16A-202ENST00000290037 PUM1Q14671 1186 aaKnown RBP eCLIP14.18□□□□□ -0.146e-6■■□□□ 13.7
Retrieved 64 of 64 RNA–protein pairs in 52.1 ms