RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.85■□□□□ 0.297e-22■■■■■ 89.9
CAPN1-201ENST00000279247 GTF2F1P35269 517 aaKnown RBP eCLIP19.91■□□□□ 0.784e-13■■■■□ 21.8
CAPN1-201ENST00000279247 RPS3P23396 243 aaKnown RBP eCLIP17.63■□□□□ 0.411e-12■□□□□ 9.8
CAPN1-201ENST00000279247 DDX3XO00571 662 aaKnown RBP eCLIP19.48■□□□□ 0.713e-11■■■■■ 33.2
CAPN1-201ENST00000279247 TIA1P31483 386 aaKnown RBP eCLIP17.25■□□□□ 0.351e-10■□□□□ 11.1
CAPN1-201ENST00000279247 UPF1Q92900 1129 aaKnown RBP eCLIP20.42■□□□□ 0.862e-10■■■■□ 24.6
CAPN1-201ENST00000279247 SF3A3Q12874 501 aaKnown RBP eCLIP18.84■□□□□ 0.618e-10■■■■□ 21.2
CAPN1-201ENST00000279247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.68■□□□□ 0.742e-9■□□□□ 10
CAPN1-201ENST00000279247 PCBP1Q15365 356 aaKnown RBP eCLIP18.75■□□□□ 0.591e-8■■■■■ 32.7
CAPN1-201ENST00000279247 NCBP2P52298 156 aaKnown RBP eCLIP17.03■□□□□ 0.322e-8■□□□□ 10.4
CAPN1-201ENST00000279247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.43□□□□□ -0.12e-8■■■□□ 16
CAPN1-201ENST00000279247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.672e-8■■■■□ 22.3
CAPN1-201ENST00000279247 METAP2P50579 478 aaKnown RBP eCLIP21.02■□□□□ 0.953e-8■■■■□ 23.9
CAPN1-201ENST00000279247 SF3B4Q15427 424 aaKnown RBP eCLIP15.81■□□□□ 0.121e-7■■■■■ 31.6
CAPN1-201ENST00000279247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.72■□□□□ 0.751e-7■■■■■ 67.7
CAPN1-201ENST00000279247 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.23■□□□□ 0.672e-7■■■□□ 16.5
CAPN1-201ENST00000279247 LARP4Q71RC2 724 aaKnown RBP eCLIP17.71■□□□□ 0.434e-7■□□□□ 10.9
CAPN1-201ENST00000279247 ZRANB2O95218 330 aaKnown RBP eCLIP19.43■□□□□ 0.74e-7■■■■■ 32.1
CAPN1-201ENST00000279247 PTBP1P26599 531 aaKnown RBP eCLIP15.94■□□□□ 0.144e-7■■□□□ 12.9
CAPN1-201ENST00000279247 YBX3P16989 372 aaKnown RBP eCLIP20■□□□□ 0.795e-7■■□□□ 12.9
CAPN1-201ENST00000279247 SUB1P53999 127 aaKnown RBP eCLIP14.37□□□□□ -0.116e-7■□□□□ 8.8
CAPN1-201ENST00000279247 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.29■■□□□ 17e-7■■■■□ 19.9
CAPN1-201ENST00000279247 ZNF622Q969S3 477 aaKnown RBP eCLIP20.78■□□□□ 0.927e-7■■■□□ 15.2
CAPN1-201ENST00000279247 PABPC4Q13310 644 aaKnown RBP eCLIP20.02■□□□□ 0.87e-7■■□□□ 12
CAPN1-201ENST00000279247 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.978e-7■■■■□ 24.7
CAPN1-201ENST00000279247 PPIGQ13427 754 aaKnown RBP eCLIP17.85■□□□□ 0.458e-7■■■□□ 16.7
CAPN1-201ENST00000279247 FXR2P51116 673 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■■□□ 14.6
CAPN1-201ENST00000279247 FMR1Q06787 632 aaKnown RBP eCLIP20.39■□□□□ 0.851e-6■■■□□ 16.5
CAPN1-201ENST00000279247 AKAP1Q92667 903 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■■■□□ 18.5
CAPN1-201ENST00000279247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.12■■□□□ 1.132e-6■■□□□ 11.9
CAPN1-201ENST00000279247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■□□□□ 9.3
CAPN1-201ENST00000279247 EFTUD2Q15029 972 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■■ 29.3
CAPN1-201ENST00000279247 PRPF4O43172 522 aaKnown RBP eCLIP18.4■□□□□ 0.542e-6■■■□□ 17.7
CAPN1-201ENST00000279247 PCBP2Q15366 365 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■■□□ 14.7
CAPN1-201ENST00000279247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.97■□□□□ 0.793e-6■□□□□ 10.3
CAPN1-201ENST00000279247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.82■□□□□ 0.763e-6■■■■■ 38.5
CAPN1-201ENST00000279247 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.523e-6■■■□□ 14.7
CAPN1-201ENST00000279247 SF3B1O75533 1304 aaKnown RBP eCLIP18.34■□□□□ 0.533e-6■■■■■ 68.7
CAPN1-201ENST00000279247 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.13e-6■■■□□ 16
CAPN1-201ENST00000279247 MATR3P43243 847 aaKnown RBP eCLIP19.57■□□□□ 0.724e-6■□□□□ 9.5
CAPN1-201ENST00000279247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.43■■□□□ 1.664e-6■■□□□ 13.3
CAPN1-201ENST00000279247 AATFQ9NY61 560 aaKnown RBP eCLIP21.02■□□□□ 0.956e-6■■■■■ 54.7
CAPN1-201ENST00000279247 QKIQ96PU8 341 aaKnown RBP eCLIP18.52■□□□□ 0.556e-6■■■■□ 20.5
CAPN1-201ENST00000279247 HNRNPKP61978 463 aaKnown RBP eCLIP16.7■□□□□ 0.268e-6■■■■□ 20.7
CAPN1-201ENST00000279247 RBFOX2O43251 390 aaKnown RBP eCLIP14.65□□□□□ -0.061e-5■■■■□ 19.7
Retrieved 45 of 45 RNA–protein pairs in 29.1 ms