RNA: ENST00000269383.7

TRIM65-201, Transcript of tripartite motif containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM65, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-201ENST00000269383 SF3B1O75533 1304 aaKnown RBP eCLIP14.55□□□□□ -0.081e-6■■■■■ 111.6
TRIM65-201ENST00000269383 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.194e-7■■■■■ 73.7
TRIM65-201ENST00000269383 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.834e-13■■■■■ 71.7
TRIM65-201ENST00000269383 TARDBPQ13148 414 aaKnown RBP eCLIP13.89□□□□□ -0.198e-11■■■■■ 63.2
TRIM65-201ENST00000269383 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.35□□□□□ -0.118e-8■■■■■ 53
TRIM65-201ENST00000269383 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.215e-12■■■■■ 46
TRIM65-201ENST00000269383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■■■■ 38.4
TRIM65-201ENST00000269383 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.875e-9■■■■■ 37.9
TRIM65-201ENST00000269383 SF3B4Q15427 424 aaKnown RBP eCLIP14.06□□□□□ -0.161e-7■■■■■ 29.3
TRIM65-201ENST00000269383 SRSF7Q16629 238 aaKnown RBP eCLIP12□□□□□ -0.497e-9■■■■■ 29.1
TRIM65-201ENST00000269383 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.71■□□□□ 0.116e-8■■■■■ 28.6
TRIM65-201ENST00000269383 RBM15Q96T37 977 aaKnown RBP eCLIP15.43■□□□□ 0.068e-8■■■■□ 25.8
TRIM65-201ENST00000269383 UPF1Q92900 1129 aaKnown RBP eCLIP14.7□□□□□ -0.063e-8■■■■□ 24.1
TRIM65-201ENST00000269383 RBFOX2O43251 390 aaKnown RBP eCLIP11.97□□□□□ -0.494e-10■■■■□ 23.3
TRIM65-201ENST00000269383 SRSF1Q07955 248 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■□ 23.2
TRIM65-201ENST00000269383 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.255e-6■■■■□ 21.6
TRIM65-201ENST00000269383 NONOQ15233 471 aaKnown RBP eCLIP16.31■□□□□ 0.24e-8■■■■□ 21
TRIM65-201ENST00000269383 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.053e-6■■■■□ 20
TRIM65-201ENST00000269383 DDX6P26196 483 aaKnown RBP eCLIP13.71□□□□□ -0.213e-6■■■■□ 20
TRIM65-201ENST00000269383 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.31□□□□□ -0.123e-6■■■■□ 19.8
TRIM65-201ENST00000269383 GTF2F1P35269 517 aaKnown RBP eCLIP16.69■□□□□ 0.262e-12■■■■□ 19.5
TRIM65-201ENST00000269383 DDX3XO00571 662 aaKnown RBP eCLIP15.8■□□□□ 0.122e-21■■■□□ 19.1
TRIM65-201ENST00000269383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.21□□□□□ -0.463e-15■■■□□ 18.7
TRIM65-201ENST00000269383 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.34■□□□□ 0.054e-6■■■□□ 18.6
TRIM65-201ENST00000269383 U2AF2P26368 475 aaKnown RBP eCLIP17.08■□□□□ 0.332e-6■■■□□ 18.5
TRIM65-201ENST00000269383 NCBP2P52298 156 aaKnown RBP eCLIP13.85□□□□□ -0.192e-9■■■□□ 18.4
TRIM65-201ENST00000269383 SF3A3Q12874 501 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■■■□□ 18.3
TRIM65-201ENST00000269383 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■□□ 17.9
TRIM65-201ENST00000269383 AARSP49588 968 aaKnown RBP eCLIP15.72■□□□□ 0.112e-6■■■□□ 17.5
TRIM65-201ENST00000269383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.1■□□□□ 0.017e-7■■■□□ 16.7
TRIM65-201ENST00000269383 EWSR1Q01844 656 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■■□□ 16.5
TRIM65-201ENST00000269383 AKAP1Q92667 903 aaKnown RBP eCLIP13.43□□□□□ -0.265e-7■■■□□ 16.3
TRIM65-201ENST00000269383 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.3□□□□□ -0.284e-7■■■□□ 15.7
TRIM65-201ENST00000269383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.89■□□□□ 0.772e-7■■■□□ 15.5
TRIM65-201ENST00000269383 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.56■□□□□ 0.087e-6■■■□□ 14.7
TRIM65-201ENST00000269383 PRPF4O43172 522 aaKnown RBP eCLIP14.99□□□□□ -0.011e-7■■□□□ 14.3
TRIM65-201ENST00000269383 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.67□□□□□ -0.062e-7■■□□□ 13.8
TRIM65-201ENST00000269383 RBM22Q9NW64 420 aaKnown RBP eCLIP14.83□□□□□ -0.042e-6■■□□□ 13.7
TRIM65-201ENST00000269383 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.461e-11■■□□□ 13
TRIM65-201ENST00000269383 PPIGQ13427 754 aaKnown RBP eCLIP13.93□□□□□ -0.181e-7■■□□□ 13
TRIM65-201ENST00000269383 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.883e-6■■□□□ 12.4
TRIM65-201ENST00000269383 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.384e-6■□□□□ 11.3
TRIM65-201ENST00000269383 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.43□□□□□ -0.17e-11■□□□□ 11.2
TRIM65-201ENST00000269383 PABPC4Q13310 644 aaKnown RBP eCLIP16.2■□□□□ 0.181e-6■□□□□ 11
TRIM65-201ENST00000269383 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.17□□□□□ -0.148e-9■□□□□ 10.9
TRIM65-201ENST00000269383 SAFBQ15424 915 aaKnown RBP eCLIP16.82■□□□□ 0.285e-6■□□□□ 10.8
TRIM65-201ENST00000269383 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.92□□□□□ -0.023e-6■□□□□ 10.2
TRIM65-201ENST00000269383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.157e-6■□□□□ 9.9
TRIM65-201ENST00000269383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.831e-6■□□□□ 9.8
TRIM65-201ENST00000269383 YBX3P16989 372 aaKnown RBP eCLIP14.99□□□□□ -0.012e-8■□□□□ 8.8
TRIM65-201ENST00000269383 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■□□□□ 8.1
Retrieved 51 of 51 RNA–protein pairs in 23.5 ms