RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DDX6P26196 483 aaKnown RBP eCLIP25.9■■□□□ 1.741e-323■■■■□ 20.9
SDF2L1-201ENST00000248958 PABPC4Q13310 644 aaKnown RBP eCLIP29.12■■■□□ 2.251e-37■■■■□ 19.3
SDF2L1-201ENST00000248958 SRSF7Q16629 238 aaKnown RBP eCLIP19.42■□□□□ 0.73e-31■■■□□ 14.9
SDF2L1-201ENST00000248958 TARDBPQ13148 414 aaKnown RBP eCLIP24.06■■□□□ 1.442e-29■■■■□ 25.2
SDF2L1-201ENST00000248958 XRCC6P12956 609 aaKnown RBP eCLIP27.22■■□□□ 1.951e-20■□□□□ 9.3
SDF2L1-201ENST00000248958 YBX3P16989 372 aaKnown RBP eCLIP31.51■■■□□ 2.639e-19■■□□□ 13.3
SDF2L1-201ENST00000248958 RPS3P23396 243 aaKnown RBP eCLIP23.77■■□□□ 1.42e-15■■■□□ 17.5
SDF2L1-201ENST00000248958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.01■■■■□ 3.847e-15■■■■□ 22.7
SDF2L1-201ENST00000248958 NCBP2P52298 156 aaKnown RBP eCLIP22.45■■□□□ 1.183e-14■□□□□ 8.8
SDF2L1-201ENST00000248958 PRPF4O43172 522 aaKnown RBP eCLIP23.22■■□□□ 1.313e-14■■■■□ 25.1
SDF2L1-201ENST00000248958 DDX3XO00571 662 aaKnown RBP eCLIP25.11■■□□□ 1.618e-14■■■■■ 80.6
SDF2L1-201ENST00000248958 AQRO60306 1485 aaKnown RBP eCLIP42.43■■■■■ 4.382e-13■■■■■ 39.1
SDF2L1-201ENST00000248958 FTOQ9C0B1 505 aaKnown RBP eCLIP27.47■■□□□ 1.991e-12■□□□□ 11.3
SDF2L1-201ENST00000248958 RBM15Q96T37 977 aaKnown RBP eCLIP24.37■■□□□ 1.492e-10■□□□□ 8.4
SDF2L1-201ENST00000248958 LARP4Q71RC2 724 aaKnown RBP eCLIP22.32■■□□□ 1.162e-10■■■■■ 46.8
SDF2L1-201ENST00000248958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.35■■■■□ 3.573e-10■■■□□ 16.3
SDF2L1-201ENST00000248958 SND1Q7KZF4 910 aaKnown RBP eCLIP25.25■■□□□ 1.631e-9■■■■■ 28.3
SDF2L1-201ENST00000248958 EIF3DO15371 548 aaKnown RBP eCLIP26.52■■□□□ 1.841e-9■■■■■ 33.4
SDF2L1-201ENST00000248958 PCBP2Q15366 365 aaKnown RBP eCLIP23.06■■□□□ 1.282e-9■■■■■ 39.4
SDF2L1-201ENST00000248958 EIF3GO75821 320 aaKnown RBP eCLIP17.38■□□□□ 0.372e-9■■□□□ 13.6
SDF2L1-201ENST00000248958 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.55■■■□□ 22e-9■■□□□ 13.3
SDF2L1-201ENST00000248958 SF3B4Q15427 424 aaKnown RBP eCLIP22.17■■□□□ 1.144e-9■■■□□ 17.4
SDF2L1-201ENST00000248958 AATFQ9NY61 560 aaKnown RBP eCLIP29.58■■■□□ 2.336e-9■□□□□ 8.6
SDF2L1-201ENST00000248958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.52■■■□□ 2.168e-9■■■■■ 29.3
SDF2L1-201ENST00000248958 SRSF1Q07955 248 aaKnown RBP eCLIP22.44■■□□□ 1.188e-9■□□□□ 10.5
SDF2L1-201ENST00000248958 GTF2F1P35269 517 aaKnown RBP eCLIP26.58■■□□□ 1.851e-8■■■■■ 47.9
SDF2L1-201ENST00000248958 FMR1Q06787 632 aaKnown RBP eCLIP30.03■■■□□ 2.41e-8■□□□□ 10
SDF2L1-201ENST00000248958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.15■■□□□ 1.781e-8■■■■■ 29.8
SDF2L1-201ENST00000248958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.54■□□□□ 0.882e-8■■■■□ 26.2
SDF2L1-201ENST00000248958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.51■■□□□ 1.833e-8■■■□□ 16.2
SDF2L1-201ENST00000248958 EFTUD2Q15029 972 aaKnown RBP eCLIP23.26■■□□□ 1.317e-8■■■■■ 41.9
SDF2L1-201ENST00000248958 GRSF1Q12849 480 aaKnown RBP eCLIP25.52■■□□□ 1.689e-8■■■■□ 26.5
SDF2L1-201ENST00000248958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.63■■□□□ 1.534e-7■□□□□ 9.1
SDF2L1-201ENST00000248958 FXR2P51116 673 aaKnown RBP eCLIP27.22■■□□□ 1.954e-7■□□□□ 8.1
SDF2L1-201ENST00000248958 GPKOWQ92917 476 aaPredicted RBP eCLIP28■■■□□ 2.075e-7■■■■□ 26.2
SDF2L1-201ENST00000248958 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.29■■□□□ 1.646e-7■■■■□ 24.1
SDF2L1-201ENST00000248958 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.5■■■□□ 2.158e-7■□□□□ 8.8
SDF2L1-201ENST00000248958 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.52■■■□□ 2.321e-6■■■■□ 20.5
SDF2L1-201ENST00000248958 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.73■■□□□ 1.231e-6■□□□□ 10.8
SDF2L1-201ENST00000248958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.9■■□□□ 1.742e-6■■■■■ 28.4
SDF2L1-201ENST00000248958 SF3B1O75533 1304 aaKnown RBP eCLIP26.54■■□□□ 1.843e-6■■■■■ 160.8
SDF2L1-201ENST00000248958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.23■■□□□ 1.954e-6■□□□□ 8.1
SDF2L1-201ENST00000248958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.41■■□□□ 1.59e-6■□□□□ 10.1
Retrieved 43 of 43 RNA–protein pairs in 26.7 ms