RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 DDX3XO00571 662 aaKnown RBP eCLIP14.02□□□□□ -0.171e-28■■■■■ 35.7
TARDBP-201ENST00000240185 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.217e-26■■■□□ 18.2
TARDBP-201ENST00000240185 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.043e-23■□□□□ 9.1
TARDBP-201ENST00000240185 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.26□□□□□ -0.292e-21■■□□□ 12.4
TARDBP-201ENST00000240185 PRPF4O43172 522 aaKnown RBP eCLIP14.55□□□□□ -0.082e-14■■□□□ 12.4
TARDBP-201ENST00000240185 TARDBPQ13148 414 aaKnown RBP eCLIP13.67□□□□□ -0.221e-13■■■■■ 26.9
TARDBP-201ENST00000240185 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.68■□□□□ 0.13e-13■□□□□ 8.3
TARDBP-201ENST00000240185 YBX3P16989 372 aaKnown RBP eCLIP13.93□□□□□ -0.188e-13■□□□□ 8.1
TARDBP-201ENST00000240185 NCBP2P52298 156 aaKnown RBP eCLIP13.5□□□□□ -0.251e-12■■■□□ 17.9
TARDBP-201ENST00000240185 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.17■□□□□ 0.182e-12■□□□□ 8.7
TARDBP-201ENST00000240185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.418e-12■■■■■ 35.2
TARDBP-201ENST00000240185 GRSF1Q12849 480 aaKnown RBP eCLIP14□□□□□ -0.171e-11■■□□□ 12.1
TARDBP-201ENST00000240185 SUB1P53999 127 aaKnown RBP eCLIP12.71□□□□□ -0.371e-11■□□□□ 9.4
TARDBP-201ENST00000240185 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.272e-11■■■□□ 15.1
TARDBP-201ENST00000240185 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.478e-11■■□□□ 12.1
TARDBP-201ENST00000240185 U2AF2P26368 475 aaKnown RBP eCLIP15.82■□□□□ 0.121e-10■□□□□ 10.2
TARDBP-201ENST00000240185 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.592e-10■■■□□ 18.4
TARDBP-201ENST00000240185 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.343e-10■■■■□ 22.6
TARDBP-201ENST00000240185 FUSP35637 526 aaKnown RBP eCLIP11.04□□□□□ -0.643e-10■■□□□ 12.1
TARDBP-201ENST00000240185 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.024e-10■□□□□ 10.1
TARDBP-201ENST00000240185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.462e-9■■□□□ 13.4
TARDBP-201ENST00000240185 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11□□□□□ -0.652e-9■■■■■ 39
TARDBP-201ENST00000240185 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.413e-9■■□□□ 11.9
TARDBP-201ENST00000240185 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.255e-9■□□□□ 10.1
TARDBP-201ENST00000240185 SMNDC1O75940 238 aaKnown RBP eCLIP14.48□□□□□ -0.092e-8■■■■■ 29.2
TARDBP-201ENST00000240185 RPS3P23396 243 aaKnown RBP eCLIP13.7□□□□□ -0.223e-8■□□□□ 11
TARDBP-201ENST00000240185 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.165e-8■■■■■ 204.6
TARDBP-201ENST00000240185 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.87□□□□□ -0.357e-8■□□□□ 8.3
TARDBP-201ENST00000240185 CPSF6Q16630 551 aaKnown RBP eCLIP13.87□□□□□ -0.198e-8■■■□□ 17.3
TARDBP-201ENST00000240185 DDX6P26196 483 aaKnown RBP eCLIP13.58□□□□□ -0.241e-7■■■■□ 21
TARDBP-201ENST00000240185 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.161e-7■■□□□ 12
TARDBP-201ENST00000240185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.141e-7■■■■■ 34.9
TARDBP-201ENST00000240185 RBM22Q9NW64 420 aaKnown RBP eCLIP14.07□□□□□ -0.161e-7■■■■□ 22.6
TARDBP-201ENST00000240185 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.152e-7■■□□□ 11.5
TARDBP-201ENST00000240185 AQRO60306 1485 aaKnown RBP eCLIP15.15■□□□□ 0.022e-7■■□□□ 14.3
TARDBP-201ENST00000240185 TIA1P31483 386 aaKnown RBP eCLIP13.2□□□□□ -0.32e-7■■■□□ 19.2
TARDBP-201ENST00000240185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.133e-7■■□□□ 13.6
TARDBP-201ENST00000240185 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.533e-7■□□□□ 11.1
TARDBP-201ENST00000240185 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.343e-7■■■□□ 15.3
TARDBP-201ENST00000240185 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.324e-7■□□□□ 10.8
TARDBP-201ENST00000240185 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.286e-7■□□□□ 11.3
TARDBP-201ENST00000240185 PPIGQ13427 754 aaKnown RBP eCLIP13.31□□□□□ -0.286e-7■□□□□ 8.8
TARDBP-201ENST00000240185 HNRNPMP52272 730 aaKnown RBP eCLIP16.35■□□□□ 0.217e-7■■□□□ 12.4
TARDBP-201ENST00000240185 RBM15Q96T37 977 aaKnown RBP eCLIP14.6□□□□□ -0.079e-7■■■□□ 18.3
TARDBP-201ENST00000240185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.86■□□□□ 0.131e-6■□□□□ 9.2
TARDBP-201ENST00000240185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■■□□ 15.4
TARDBP-201ENST00000240185 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.74□□□□□ -0.051e-6■□□□□ 10.9
TARDBP-201ENST00000240185 TIAL1Q01085 375 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■□□□ 13.8
TARDBP-201ENST00000240185 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.36□□□□□ -0.273e-6■■■■□ 22.6
TARDBP-201ENST00000240185 QKIQ96PU8 341 aaKnown RBP eCLIP14.43□□□□□ -0.13e-6■□□□□ 9.1
TARDBP-201ENST00000240185 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.263e-6■■■■■ 48.5
TARDBP-201ENST00000240185 CDC40O60508 579 aaKnown RBP eCLIP14.15□□□□□ -0.145e-6■■□□□ 12.3
TARDBP-201ENST00000240185 ILF3Q12906 894 aaKnown RBP eCLIP13.55□□□□□ -0.246e-6■□□□□ 8.6
TARDBP-201ENST00000240185 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.86□□□□□ -0.037e-6■■■■■ 27.5
TARDBP-201ENST00000240185 RBFOX2O43251 390 aaKnown RBP eCLIP12.16□□□□□ -0.469e-6■□□□□ 10.7
Retrieved 55 of 55 RNA–protein pairs in 25.6 ms