Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 ZFAS1-207ENST00000458653 596 ntTSL 236.76■■■■□ 3.481e-323■■■■□ 24.8
NIP7Q9Y221 SNX5-206ENST00000469704 696 ntTSL 334.78■■■■□ 3.161e-323■■□□□ 13.3
NIP7Q9Y221 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)33.04■■■□□ 2.881e-323■■■■□ 24.8
NIP7Q9Y221 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)32■■■□□ 2.711e-323■■■■□ 24.8
NIP7Q9Y221 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)28.01■■■□□ 2.071e-323■■■■□ 24.8
NIP7Q9Y221 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.01■■■□□ 2.071e-323■■■■□ 24.8
NIP7Q9Y221 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.071e-323■■□□□ 13.3
NIP7Q9Y221 RPL7A-203ENST00000426651 1057 ntTSL 526.12■■□□□ 1.771e-323■■■□□ 17.4
NIP7Q9Y221 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.761e-323■■■□□ 14.9
NIP7Q9Y221 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.561e-323■■■□□ 14.9
NIP7Q9Y221 RNF149-202ENST00000424632 2010 ntTSL 224.12■■□□□ 1.451e-323■□□□□ 8.6
NIP7Q9Y221 RPL3-203ENST00000402527 1205 ntTSL 523.74■■□□□ 1.391e-323■□□□□ 9.1
NIP7Q9Y221 RPL7A-209ENST00000496554 947 ntTSL 223.61■■□□□ 1.371e-323■■■□□ 17.4
NIP7Q9Y221 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.321e-323■□□□□ 9.1
NIP7Q9Y221 SNRPB-203ENST00000474384 985 ntTSL 523.2■■□□□ 1.31e-323■■■■■ 29.1
NIP7Q9Y221 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.31e-323■■■□□ 14.9
NIP7Q9Y221 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.191e-323■■■□□ 14.9
NIP7Q9Y221 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.181e-323■■■□□ 14.9
NIP7Q9Y221 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.181e-323■■■□□ 14.9
NIP7Q9Y221 NCL-202ENST00000356936 890 ntTSL 322.37■■□□□ 1.171e-323■□□□□ 10
NIP7Q9Y221 EIF4A1-216ENST00000580888 710 ntTSL 222.28■■□□□ 1.161e-323■■■□□ 14.6
NIP7Q9Y221 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.82■■□□□ 1.081e-323■■■□□ 14.6
NIP7Q9Y221 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.52■■□□□ 1.041e-323■■□□□ 11.8
NIP7Q9Y221 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.911e-323■■■□□ 17.9
NIP7Q9Y221 SNX5-204ENST00000431277 840 ntTSL 520.74■□□□□ 0.911e-323■■□□□ 13.3
NIP7Q9Y221 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.911e-323■■■■■ 29.1
NIP7Q9Y221 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.911e-323■■■■■ 29.1
NIP7Q9Y221 RPL13A-211ENST00000486930 652 ntTSL 320.48■□□□□ 0.871e-323■□□□□ 9.9
NIP7Q9Y221 SNHG5-203ENST00000420199 1002 ntTSL 320.36■□□□□ 0.851e-323■■□□□ 11.8
NIP7Q9Y221 MATR3-235ENST00000506147 580 ntTSL 419.91■□□□□ 0.781e-323■■□□□ 14.4
NIP7Q9Y221 MATR3-239ENST00000514694 587 ntTSL 419.84■□□□□ 0.771e-323■■□□□ 14.4
NIP7Q9Y221 SNX5-203ENST00000419004 778 ntTSL 519.65■□□□□ 0.741e-323■■□□□ 13.3
NIP7Q9Y221 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.681e-323■■■□□ 14.6
NIP7Q9Y221 EIF4A1-207ENST00000578324 1577 ntTSL 519.22■□□□□ 0.671e-323■■■□□ 14.6
NIP7Q9Y221 SNHG5-215ENST00000623163 851 ntTSL 519.17■□□□□ 0.661e-323■■□□□ 11.8
NIP7Q9Y221 SNX5-214ENST00000490175 2025 ntTSL 1 (best)19.08■□□□□ 0.641e-323■■□□□ 13.3
NIP7Q9Y221 HSPA9-212ENST00000523929 780 ntTSL 418.71■□□□□ 0.591e-323■■■■■ 30.9
NIP7Q9Y221 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.58■□□□□ 0.561e-323■□□□□ 9.1
NIP7Q9Y221 MATR3-238ENST00000512107 579 ntTSL 418.56■□□□□ 0.561e-323■■□□□ 14.4
NIP7Q9Y221 EIF4A1-228ENST00000583389 951 ntTSL 318.55■□□□□ 0.561e-323■■■□□ 14.6
NIP7Q9Y221 NOP56-216ENST00000492135 1143 ntTSL 1 (best)18.5■□□□□ 0.551e-323■■■□□ 17.9
NIP7Q9Y221 OVOL2-204ENST00000486776 550 ntTSL 318.37■□□□□ 0.531e-323■■□□□ 13.3
NIP7Q9Y221 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.531e-323■■□□□ 13.3
NIP7Q9Y221 SNHG4-203ENST00000506188 801 ntTSL 418.26■□□□□ 0.511e-323■■□□□ 14.4
NIP7Q9Y221 SNHG5-209ENST00000435947 696 ntTSL 218.24■□□□□ 0.511e-323■■□□□ 11.8
NIP7Q9Y221 RPL3-215ENST00000481985 557 ntTSL 217.95■□□□□ 0.461e-323■□□□□ 9.1
NIP7Q9Y221 RPL3-211ENST00000465618 2108 ntTSL 1 (best)17.91■□□□□ 0.461e-323■□□□□ 9.1
NIP7Q9Y221 EIF4A1-235ENST00000584860 1109 ntTSL 317.74■□□□□ 0.431e-323■■■□□ 14.6
NIP7Q9Y221 NOP56-220ENST00000616692 2662 ntTSL 1 (best)17.43■□□□□ 0.381e-323■■■□□ 17.9
NIP7Q9Y221 RPL3-206ENST00000453303 916 ntTSL 517.42■□□□□ 0.381e-323■□□□□ 9.1
NIP7Q9Y221 MATR3-236ENST00000509644 750 ntTSL 317.29■□□□□ 0.361e-323■■□□□ 14.4
NIP7Q9Y221 SNHG4-201ENST00000448190 542 ntTSL 417.25■□□□□ 0.351e-323■■□□□ 14.4
NIP7Q9Y221 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.341e-323■■■□□ 14.9
NIP7Q9Y221 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.341e-323■■■□□ 14.9
NIP7Q9Y221 RPL7A-205ENST00000468019 941 ntTSL 217.19■□□□□ 0.341e-323■■■■□ 23.3
NIP7Q9Y221 EIF4A2-208ENST00000445596 600 ntTSL 217.05■□□□□ 0.321e-323■■■■■ 27.8
NIP7Q9Y221 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC16.99■□□□□ 0.311e-323■■□□□ 14.4
NIP7Q9Y221 EIF4A2-215ENST00000467585 570 ntTSL 216.74■□□□□ 0.271e-323■■■■■ 27.8
NIP7Q9Y221 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC16.46■□□□□ 0.231e-323■■□□□ 11.8
NIP7Q9Y221 SNHG4-202ENST00000505522 629 ntTSL 1 (best)16.18■□□□□ 0.181e-323■■□□□ 14.4
NIP7Q9Y221 SNHG4-208ENST00000514110 679 ntTSL 1 (best)16.18■□□□□ 0.181e-323■■□□□ 14.4
NIP7Q9Y221 MATR3-234ENST00000505016 664 ntTSL 216.18■□□□□ 0.181e-323■■□□□ 14.4
NIP7Q9Y221 SNHG4-206ENST00000508735 310 ntTSL 1 (best)16.18■□□□□ 0.181e-323■■□□□ 14.4
NIP7Q9Y221 SNHG5-206ENST00000428833 641 ntTSL 216.04■□□□□ 0.161e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-210ENST00000453754 401 ntTSL 316.04■□□□□ 0.161e-323■■□□□ 11.8
NIP7Q9Y221 HSPA9-207ENST00000507097 1796 ntTSL 215.98■□□□□ 0.151e-323■■■■■ 30.9
NIP7Q9Y221 NOP56-219ENST00000612233 2980 nt15.96■□□□□ 0.151e-323■■■□□ 17.9
NIP7Q9Y221 SNHG5-207ENST00000431043 998 ntTSL 215.81■□□□□ 0.121e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC15.81■□□□□ 0.121e-323■■□□□ 11.8
NIP7Q9Y221 NOP56-206ENST00000466447 1094 ntTSL 215.63■□□□□ 0.091e-323■■■□□ 17.9
NIP7Q9Y221 EIF4A1-236ENST00000584901 1021 ntTSL 215.33■□□□□ 0.041e-323■■■□□ 14.6
NIP7Q9Y221 SNORD10-201ENST00000459579 142 ntBASIC15.27■□□□□ 0.041e-323■■■□□ 14.6
NIP7Q9Y221 RPL7A-206ENST00000485706 743 ntTSL 215.26■□□□□ 0.031e-323■■■□□ 17.4
NIP7Q9Y221 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC15.24■□□□□ 0.031e-323■■□□□ 14.4
NIP7Q9Y221 MATR3-231ENST00000502394 589 ntTSL 415.18■□□□□ 0.021e-323■■□□□ 14.4
NIP7Q9Y221 EIF4A2-227ENST00000498746 579 ntTSL 214.7□□□□□ -0.061e-323■■■■■ 27.8
NIP7Q9Y221 RPL3-213ENST00000471290 481 ntTSL 214.69□□□□□ -0.061e-323■□□□□ 9.1
NIP7Q9Y221 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)14.66□□□□□ -0.061e-323■□□□□ 9.1
NIP7Q9Y221 HSPA9-210ENST00000508003 582 ntTSL 214.63□□□□□ -0.071e-323■■■■■ 30.9
NIP7Q9Y221 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.091e-323■■□□□ 14.4
NIP7Q9Y221 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC14.15□□□□□ -0.141e-323■■□□□ 11.8
NIP7Q9Y221 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC14.06□□□□□ -0.161e-323■■■□□ 14.6
NIP7Q9Y221 EIF4A1-218ENST00000581544 1444 ntTSL 213.96□□□□□ -0.181e-323■■■□□ 14.6
NIP7Q9Y221 EIF4A1-229ENST00000583802 563 ntTSL 413.61□□□□□ -0.231e-323■■■□□ 14.6
NIP7Q9Y221 RPL7A-207ENST00000489392 966 ntTSL 513.55□□□□□ -0.241e-323■■■■□ 23.3
NIP7Q9Y221 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC13.39□□□□□ -0.271e-323■■■□□ 14.6
NIP7Q9Y221 NOP56-215ENST00000490753 640 ntTSL 212.98□□□□□ -0.331e-323■■■□□ 17.9
NIP7Q9Y221 SNHG5-202ENST00000414002 430 ntTSL 212.88□□□□□ -0.351e-323■■□□□ 11.8
NIP7Q9Y221 NOP56-202ENST00000415272 1628 ntTSL 512.74□□□□□ -0.371e-323■■■□□ 17.9
NIP7Q9Y221 EIF4A1-209ENST00000578495 916 ntTSL 512.7□□□□□ -0.381e-323■■■□□ 14.6
NIP7Q9Y221 EIF4A1-217ENST00000581384 642 ntTSL 512.55□□□□□ -0.41e-323■■■□□ 14.6
NIP7Q9Y221 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.41e-323■■■□□ 14.6
NIP7Q9Y221 NOP56-205ENST00000462630 859 ntTSL 212.39□□□□□ -0.431e-323■■■□□ 17.9
NIP7Q9Y221 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.441e-323■■■■■ 30.9
NIP7Q9Y221 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.461e-323■■■■■ 27.8
NIP7Q9Y221 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC12.1□□□□□ -0.471e-323■■■■■ 26.8
NIP7Q9Y221 EIF4A1-233ENST00000584784 818 ntTSL 512.1□□□□□ -0.471e-323■■■□□ 14.6
NIP7Q9Y221 SNHG4-207ENST00000513259 444 ntTSL 511.9□□□□□ -0.51e-323■■□□□ 14.4
NIP7Q9Y221 SNORD83A-201ENST00000386747 95 ntBASIC11.65□□□□□ -0.541e-323■□□□□ 9.1
Retrieved 100 of 1,619 protein–RNA pairs in 128.3 ms