Protein: Q92900

UPF1, Regulator of nonsense transcripts 1, humanhuman

Known RBP eCLIP

Length 1,129 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1Q92900 PHB2-208ENST00000543465 1518 ntTSL 529.85■■■□□ 2.371e-323■□□□□ 8.8
UPF1Q92900 PHB2-213ENST00000546111 858 ntTSL 2 BASIC29.23■■■□□ 2.271e-323■□□□□ 8.8
UPF1Q92900 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC28.25■■■□□ 2.111e-323■□□□□ 8.8
UPF1Q92900 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC27.61■■■□□ 2.011e-323■□□□□ 8.8
UPF1Q92900 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.54■■□□□ 1.681e-323■□□□□ 8.8
UPF1Q92900 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.681e-323■□□□□ 8.8
UPF1Q92900 SCARNA2-201ENST00000458748 420 ntBASIC25.18■■□□□ 1.621e-323■■■□□ 15
UPF1Q92900 AL356488.2-201ENST00000602755 427 ntBASIC25.18■■□□□ 1.621e-323■■■□□ 15
UPF1Q92900 PHB2-205ENST00000537646 874 ntTSL 523.12■■□□□ 1.291e-323■□□□□ 8.8
UPF1Q92900 SCARNA12-201ENST00000459155 270 ntBASIC19.6■□□□□ 0.731e-323■□□□□ 8.8
UPF1Q92900 TMEM9-210ENST00000495205 971 ntTSL 517.57■□□□□ 0.41e-323■■■■■ 84.9
UPF1Q92900 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC17.1■□□□□ 0.331e-323■■■■■ 164.2
UPF1Q92900 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.311e-323■□□□□ 9.6
UPF1Q92900 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.291e-323■□□□□ 9.6
UPF1Q92900 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.031e-323■□□□□ 9.6
UPF1Q92900 PHB2-212ENST00000545555 309 ntTSL 512.67□□□□□ -0.381e-323■□□□□ 8.8
UPF1Q92900 snoU2-30.2-201ENST00000362805 70 ntBASIC4.39□□□□□ -1.711e-323■□□□□ 9.4
UPF1Q92900 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.692e-267■■■■■ 85.9
UPF1Q92900 ARF1-208ENST00000478336 930 ntTSL 232.87■■■□□ 2.853e-93■■■■■ 111.5
UPF1Q92900 ARF1-203ENST00000470558 820 ntTSL 221.35■■□□□ 1.013e-93■■■■■ 111.5
UPF1Q92900 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.022e-86■□□□□ 8.3
UPF1Q92900 SNORA12-201ENST00000391162 147 ntBASIC4.98□□□□□ -1.612e-86■□□□□ 8.1
UPF1Q92900 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.985e-83■■■■■ 143.6
UPF1Q92900 TMBIM6-219ENST00000549471 484 ntTSL 28.83□□□□□ -12e-75■■■■□ 21.8
UPF1Q92900 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.2■□□□□ 0.982e-74■■■■■ 123.1
UPF1Q92900 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.066e-72■■■■■ 32.3
UPF1Q92900 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.35■■□□□ 1.974e-71■■■■■ 40.8
UPF1Q92900 CALM1-205ENST00000553542 877 ntTSL 5 BASIC27.15■■□□□ 1.944e-71■■■■■ 40.8
UPF1Q92900 AL713998.1-201ENST00000412872 1605 ntTSL 1 (best) BASIC14.14□□□□□ -0.156e-71■□□□□ 9.8
UPF1Q92900 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.391e-69■■■■■ 79.6
UPF1Q92900 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.652e-69■■■□□ 17.4
UPF1Q92900 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.22e-68■■■■■ 40.7
UPF1Q92900 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.891e-66■■■■■ 81.4
UPF1Q92900 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.61e-66■■■■■ 81.4
UPF1Q92900 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.451e-66■■■■■ 81.4
UPF1Q92900 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.221e-66■■■■■ 81.4
UPF1Q92900 ACTG1-214ENST00000576544 1720 ntTSL 516.36■□□□□ 0.211e-66■■■■■ 81.4
UPF1Q92900 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)15.75■□□□□ 0.111e-66■■■■■ 81.4
UPF1Q92900 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.031e-66■■■■■ 81.4
UPF1Q92900 ACTG1-215ENST00000576917 1958 ntTSL 514.45□□□□□ -0.11e-66■■■■■ 81.4
UPF1Q92900 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)14.21□□□□□ -0.131e-66■■■■■ 81.4
UPF1Q92900 PACSIN3-210ENST00000533686 443 ntTSL 321.83■■□□□ 1.093e-66■■■■■ 117.9
UPF1Q92900 METTL7A-204ENST00000550097 1846 ntTSL 518.17■□□□□ 0.53e-63■■■■■ 149.7
UPF1Q92900 METTL7A-202ENST00000547104 1825 ntTSL 1 (best)17.24■□□□□ 0.353e-63■■■■■ 149.7
UPF1Q92900 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.73e-63■■■■■ 149.7
UPF1Q92900 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.873e-63■■■■■ 149.7
UPF1Q92900 MCM4-212ENST00000521151 1125 ntTSL 213.69□□□□□ -0.221e-61■■■■□ 23.6
UPF1Q92900 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC29.46■■■□□ 2.313e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC27.27■■□□□ 1.963e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-228ENST00000584141 564 ntTSL 226.89■■□□□ 1.93e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-224ENST00000581718 574 ntTSL 226.89■■□□□ 1.93e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.98■■□□□ 1.753e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-203ENST00000472367 794 ntTSL 325.12■■□□□ 1.613e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-212ENST00000483588 688 ntTSL 323.61■■□□□ 1.373e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-229ENST00000584177 574 ntTSL 423.38■■□□□ 1.333e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.83■□□□□ 0.773e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.83■□□□□ 0.773e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.47■□□□□ 0.713e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-215ENST00000491009 863 ntTSL 219.26■□□□□ 0.673e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-219ENST00000578757 920 ntTSL 1 (best)18.91■□□□□ 0.623e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-206ENST00000477249 891 ntTSL 518.91■□□□□ 0.623e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.82■□□□□ 0.63e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC18.46■□□□□ 0.553e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 516.43■□□□□ 0.223e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-227ENST00000583400 712 ntTSL 416.21■□□□□ 0.193e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-207ENST00000478103 712 ntTSL 315.19■□□□□ 0.023e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-201ENST00000460249 773 ntTSL 315.14■□□□□ 0.013e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-222ENST00000580770 572 ntTSL 415.14■□□□□ 0.013e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-204ENST00000475947 598 ntTSL 215.14■□□□□ 0.013e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC14.27□□□□□ -0.133e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-221ENST00000580180 753 ntTSL 213.97□□□□□ -0.173e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-230ENST00000584926 604 ntTSL 512.61□□□□□ -0.393e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)12.61□□□□□ -0.393e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC12.11□□□□□ -0.473e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-216ENST00000492250 565 ntTSL 511.66□□□□□ -0.543e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.71□□□□□ -1.343e-61■□□□□ 9
UPF1Q92900 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.75■□□□□ 0.915e-59■■■■■ 54.7
UPF1Q92900 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC23.27■■□□□ 1.326e-59■■■■■ 40
UPF1Q92900 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.256e-59■■■■■ 40
UPF1Q92900 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.976e-59■■■■■ 40
UPF1Q92900 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC11.34□□□□□ -0.596e-59■■■■■ 40
UPF1Q92900 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.17■□□□□ 0.981e-58■■■■■ 160.2
UPF1Q92900 ENO1-202ENST00000464920 2266 ntTSL 1 (best)15.2■□□□□ 0.026e-58■■■□□ 17.6
UPF1Q92900 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.276e-58■■■□□ 17.6
UPF1Q92900 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC37.1■■■■□ 3.537e-58■■■■■ 73
UPF1Q92900 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.34■□□□□ 0.858e-58■■■■■ 144.8
UPF1Q92900 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.34■□□□□ 0.698e-58■■■■■ 144.8
UPF1Q92900 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.368e-58■■■■■ 144.8
UPF1Q92900 TIMP2-205ENST00000592761 2433 ntTSL 1 (best)15.24■□□□□ 0.031e-57■■■■■ 94.9
UPF1Q92900 MAZ-207ENST00000563012 646 ntTSL 328.91■■■□□ 2.223e-57■■■■□ 20
UPF1Q92900 ORMDL3-205ENST00000581284 561 ntTSL 518.39■□□□□ 0.531e-56■■■■■ 56.7
UPF1Q92900 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.066e-56■■■■■ 71.8
UPF1Q92900 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.916e-56■■■■■ 71.8
UPF1Q92900 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.16e-56■■■■■ 71.8
UPF1Q92900 KHSRP-202ENST00000594496 999 ntTSL 227.71■■■□□ 2.039e-56■■■■■ 79.4
UPF1Q92900 TM9SF4-206ENST00000479591 566 ntTSL 214.78□□□□□ -0.042e-54■■■■■ 95.7
UPF1Q92900 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.63e-54■■■■■ 71.8
UPF1Q92900 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.463e-54■■■■■ 71.8
UPF1Q92900 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.56■□□□□ 0.083e-54■■■■□ 25.9
UPF1Q92900 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.17■□□□□ 0.346e-52■■■■■ 58
Retrieved 100 of 15,879 protein–RNA pairs in 484.9 ms