Protein: Q8NHQ9

DDX55, ATP-dependent RNA helicase DDX55, humanhuman

Known RBP eCLIP

Length 600 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55Q8NHQ9 PABPC1-218ENST00000521865 628 ntTSL 226.04■■□□□ 1.761e-323■■■□□ 15.3
DDX55Q8NHQ9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.681e-323■□□□□ 9.5
DDX55Q8NHQ9 PABPC1-217ENST00000521067 492 ntTSL 325.4■■□□□ 1.661e-323■■■□□ 15.3
DDX55Q8NHQ9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.581e-323■□□□□ 9.5
DDX55Q8NHQ9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.89■■□□□ 1.571e-323■□□□□ 9.5
DDX55Q8NHQ9 PABPC1-215ENST00000520804 493 ntTSL 224.5■■□□□ 1.511e-323■■■□□ 15.3
DDX55Q8NHQ9 PABPC1-221ENST00000522720 593 ntTSL 419.99■□□□□ 0.791e-323■■■□□ 15.3
DDX55Q8NHQ9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.631e-323■□□□□ 10.6
DDX55Q8NHQ9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.591e-323■□□□□ 10.6
DDX55Q8NHQ9 PABPC1-210ENST00000519363 453 ntTSL 417.24■□□□□ 0.351e-323■■■□□ 15.3
DDX55Q8NHQ9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.53■□□□□ 0.241e-323■■■□□ 19.2
DDX55Q8NHQ9 RN7SL2-201ENST00000490232 300 ntBASIC15.72■□□□□ 0.111e-323■■□□□ 12.4
DDX55Q8NHQ9 PABPC1-205ENST00000518196 631 ntTSL 315.37■□□□□ 0.051e-323■■■□□ 15.3
DDX55Q8NHQ9 AMBP-203ENST00000540645 1356 ntTSL 215.11■□□□□ 0.011e-323■□□□□ 9.1
DDX55Q8NHQ9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.031e-323■□□□□ 10.6
DDX55Q8NHQ9 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.121e-323■□□□□ 9
DDX55Q8NHQ9 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC14.09□□□□□ -0.151e-323■■■□□ 15.1
DDX55Q8NHQ9 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.171e-323■■■□□ 19.2
DDX55Q8NHQ9 PABPC1-214ENST00000520142 754 ntTSL 313.57□□□□□ -0.241e-323■■■□□ 15.3
DDX55Q8NHQ9 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC13.49□□□□□ -0.251e-323■■■□□ 15.1
DDX55Q8NHQ9 FN1-206ENST00000359671 8524 ntTSL 5 BASIC13.27□□□□□ -0.281e-323■■■□□ 15.1
DDX55Q8NHQ9 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.321e-323■□□□□ 8.4
DDX55Q8NHQ9 HBG2-202ENST00000380252 694 ntTSL 3 BASIC12.8□□□□□ -0.361e-323■□□□□ 8.8
DDX55Q8NHQ9 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC12.73□□□□□ -0.371e-323■■■□□ 15.1
DDX55Q8NHQ9 TF-204ENST00000461695 990 ntTSL 312.49□□□□□ -0.411e-323■□□□□ 8.4
DDX55Q8NHQ9 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.411e-323■□□□□ 8.8
DDX55Q8NHQ9 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.441e-323■□□□□ 9
DDX55Q8NHQ9 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC12.1□□□□□ -0.471e-323■■■□□ 15.1
DDX55Q8NHQ9 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC12.1□□□□□ -0.471e-323■■■□□ 15.1
DDX55Q8NHQ9 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC12.08□□□□□ -0.481e-323■■■□□ 15.1
DDX55Q8NHQ9 AHSG-201ENST00000273784 1553 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.51e-323■□□□□ 9
DDX55Q8NHQ9 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC11.94□□□□□ -0.51e-323■■□□□ 12.4
DDX55Q8NHQ9 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC11.88□□□□□ -0.511e-323■■□□□ 12.4
DDX55Q8NHQ9 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.521e-323■■■□□ 15.1
DDX55Q8NHQ9 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC11.76□□□□□ -0.531e-323■■■□□ 15.1
DDX55Q8NHQ9 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.551e-323■□□□□ 8.8
DDX55Q8NHQ9 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.61e-323■□□□□ 9.3
DDX55Q8NHQ9 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.631e-323■□□□□ 8.8
DDX55Q8NHQ9 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.721e-323■□□□□ 9.3
DDX55Q8NHQ9 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC10.51□□□□□ -0.731e-323■■■□□ 15.1
DDX55Q8NHQ9 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.761e-323■□□□□ 8.5
DDX55Q8NHQ9 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.771e-323■□□□□ 9.3
DDX55Q8NHQ9 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.821e-323■□□□□ 9.3
DDX55Q8NHQ9 FN1-227ENST00000498719 2433 ntTSL 29.15□□□□□ -0.941e-323■■■□□ 15.1
DDX55Q8NHQ9 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.37□□□□□ -1.071e-323■□□□□ 9.3
DDX55Q8NHQ9 TF-207ENST00000467842 4602 ntTSL 1 (best)8.15□□□□□ -1.11e-323■□□□□ 8.4
DDX55Q8NHQ9 FN1-213ENST00000456923 3720 ntTSL 27.46□□□□□ -1.221e-323■□□□□ 8.5
DDX55Q8NHQ9 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.84□□□□□ -1.311e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.84□□□□□ -1.311e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-208ENST00000495173 445 ntTSL 36.75□□□□□ -1.331e-323■□□□□ 9.3
DDX55Q8NHQ9 HBE1-203ENST00000396895 578 ntTSL 56.39□□□□□ -1.391e-323■□□□□ 8.8
DDX55Q8NHQ9 ALB-211ENST00000505649 1509 ntTSL 56.3□□□□□ -1.41e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-205ENST00000476441 1604 ntTSL 56.13□□□□□ -1.431e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-216ENST00000511370 1519 ntTSL 56.12□□□□□ -1.431e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.08□□□□□ -1.441e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.98□□□□□ -1.451e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.86□□□□□ -1.471e-323■□□□□ 9.3
DDX55Q8NHQ9 FN1-224ENST00000492816 9171 ntTSL 55.75□□□□□ -1.491e-323■■■□□ 15.1
DDX55Q8NHQ9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.62□□□□□ -1.511e-323■□□□□ 8.5
DDX55Q8NHQ9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.591e-323■□□□□ 9.3
DDX55Q8NHQ9 ALB-213ENST00000508932 369 ntTSL 32.5□□□□□ -2.011e-323■□□□□ 9.3
DDX55Q8NHQ9 MT-TY-201ENST00000387409 66 ntBASIC0.45□□□□□ -2.341e-323■■□□□ 14
DDX55Q8NHQ9 MT-TM-201ENST00000387377 68 ntBASIC-2.95□□□□□ -2.881e-323■□□□□ 8.6
DDX55Q8NHQ9 APOA2-208ENST00000481413 927 ntTSL 219.08■□□□□ 0.641e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.24■□□□□ 0.511e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-209ENST00000481511 655 ntTSL 515.64■□□□□ 0.091e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-203ENST00000463812 401 ntTSL 2 BASIC11.62□□□□□ -0.551e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-202ENST00000463273 469 ntTSL 1 (best)11.15□□□□□ -0.621e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.521e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.42□□□□□ -1.541e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.4□□□□□ -1.711e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.32□□□□□ -1.881e-89■□□□□ 11.1
DDX55Q8NHQ9 APOA2-206ENST00000469730 265 ntTSL 513.89□□□□□ -0.192e-89■□□□□ 10.8
DDX55Q8NHQ9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.461e-85■■□□□ 14.4
DDX55Q8NHQ9 CALR-203ENST00000586803 667 ntTSL 216.3■□□□□ 0.21e-85■■□□□ 14.4
DDX55Q8NHQ9 CALR-202ENST00000586760 913 ntTSL 214.8□□□□□ -0.041e-85■■□□□ 14.4
DDX55Q8NHQ9 LRRC75A-AS1-215ENST00000491009 863 ntTSL 216.2■□□□□ 0.186e-85■□□□□ 10.6
DDX55Q8NHQ9 LRRC75A-AS1-201ENST00000460249 773 ntTSL 312.47□□□□□ -0.412e-84■□□□□ 9.5
DDX55Q8NHQ9 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.11e-83■□□□□ 10.3
DDX55Q8NHQ9 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.011e-83■□□□□ 10.3
DDX55Q8NHQ9 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.031e-83■□□□□ 10.3
DDX55Q8NHQ9 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.181e-83■□□□□ 10.3
DDX55Q8NHQ9 PRAME-213ENST00000492657 2831 ntTSL 1 (best)13.77□□□□□ -0.211e-83■□□□□ 10.3
DDX55Q8NHQ9 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.231e-83■□□□□ 10.3
DDX55Q8NHQ9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.56■■□□□ 1.042e-82■□□□□ 10.1
DDX55Q8NHQ9 ASGR1-207ENST00000574330 887 ntTSL 520.42■□□□□ 0.862e-82■□□□□ 10.1
DDX55Q8NHQ9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.382e-82■□□□□ 10.1
DDX55Q8NHQ9 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.66■□□□□ 0.262e-82■□□□□ 10.1
DDX55Q8NHQ9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.789e-78■■□□□ 11.7
DDX55Q8NHQ9 ACTB-207ENST00000462494 2245 ntTSL 517.84■□□□□ 0.459e-78■■□□□ 11.7
DDX55Q8NHQ9 ACTB-204ENST00000425660 1845 ntTSL 1 (best)17.22■□□□□ 0.359e-78■■□□□ 11.7
DDX55Q8NHQ9 ACTB-208ENST00000464611 715 ntTSL 59.15□□□□□ -0.949e-78■■□□□ 11.7
DDX55Q8NHQ9 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.2■□□□□ 0.826e-77■□□□□ 10.6
DDX55Q8NHQ9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.16■□□□□ 0.826e-77■□□□□ 10.6
DDX55Q8NHQ9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.796e-77■□□□□ 10.6
DDX55Q8NHQ9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.54■□□□□ 0.726e-77■□□□□ 10.6
DDX55Q8NHQ9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.54■□□□□ 0.726e-77■□□□□ 10.6
DDX55Q8NHQ9 BSG-216ENST00000618112 769 ntTSL 219.16■□□□□ 0.666e-77■□□□□ 10.6
DDX55Q8NHQ9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.64■□□□□ 0.576e-77■□□□□ 10.6
DDX55Q8NHQ9 BSG-205ENST00000571735 2155 ntTSL 217.59■□□□□ 0.416e-77■□□□□ 10.6
Retrieved 100 of 15,504 protein–RNA pairs in 506.2 ms