Protein: Q8NHQ9

DDX55, ATP-dependent RNA helicase DDX55, humanhuman

Known RBP eCLIP

Length 600 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55Q8NHQ9 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC15.35■□□□□ 0.053e-16■■■■■ 170.4
DDX55Q8NHQ9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.681e-38■■■■■ 121.2
DDX55Q8NHQ9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.982e-35■■■■■ 100.7
DDX55Q8NHQ9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.97■□□□□ 0.952e-35■■■■■ 100.7
DDX55Q8NHQ9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.71■□□□□ 0.752e-35■■■■■ 100.7
DDX55Q8NHQ9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.42e-35■■■■■ 100.7
DDX55Q8NHQ9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.28■□□□□ 0.362e-35■■■■■ 100.7
DDX55Q8NHQ9 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC10.18□□□□□ -0.782e-35■■■■■ 100.7
DDX55Q8NHQ9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.35■■■□□ 2.291e-32■■■■■ 75.3
DDX55Q8NHQ9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.411e-32■■■■■ 75.3
DDX55Q8NHQ9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.02■□□□□ 0.961e-32■■■■■ 75.3
DDX55Q8NHQ9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.661e-32■■■■■ 75.3
DDX55Q8NHQ9 CSTF1-206ENST00000493039 2234 ntTSL 511.05□□□□□ -0.642e-10■■■■■ 63.8
DDX55Q8NHQ9 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.792e-10■■■■■ 63.8
DDX55Q8NHQ9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.163e-20■■■■■ 60.4
DDX55Q8NHQ9 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC13.11□□□□□ -0.313e-20■■■■■ 60.4
DDX55Q8NHQ9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC34.24■■■■□ 3.075e-8■■■■■ 57.5
DDX55Q8NHQ9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.69■■■□□ 2.665e-8■■■■■ 57.5
DDX55Q8NHQ9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.35e-8■■■■■ 57.5
DDX55Q8NHQ9 SSBP4-203ENST00000593641 900 ntTSL 528.35■■■□□ 2.135e-8■■■■■ 57.5
DDX55Q8NHQ9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.22e-12■■■■■ 57.4
DDX55Q8NHQ9 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.15■□□□□ 0.022e-12■■■■■ 57.4
DDX55Q8NHQ9 OSBP2-206ENST00000431368 3050 ntTSL 514.29□□□□□ -0.122e-12■■■■■ 57.4
DDX55Q8NHQ9 OSBP2-212ENST00000452656 2763 ntTSL 1 (best)13.73□□□□□ -0.212e-12■■■■■ 57.4
DDX55Q8NHQ9 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC13.16□□□□□ -0.32e-12■■■■■ 57.4
DDX55Q8NHQ9 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC12.89□□□□□ -0.352e-12■■■■■ 57.4
DDX55Q8NHQ9 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.462e-12■■■■■ 57.4
DDX55Q8NHQ9 CFI-207ENST00000618244 1345 ntTSL 5 BASIC9.86□□□□□ -0.835e-12■■■■■ 55.9
DDX55Q8NHQ9 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.15e-12■■■■■ 55.9
DDX55Q8NHQ9 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.235e-12■■■■■ 55.9
DDX55Q8NHQ9 CFI-203ENST00000504853 2368 ntTSL 26.74□□□□□ -1.335e-12■■■■■ 55.9
DDX55Q8NHQ9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.485e-12■■■■■ 55.9
DDX55Q8NHQ9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.25■□□□□ 0.835e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-240ENST00000636871 2076 ntTSL 520.17■□□□□ 0.825e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-251ENST00000637684 2168 ntTSL 519.96■□□□□ 0.795e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-247ENST00000637455 1512 ntTSL 519.74■□□□□ 0.755e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-243ENST00000637059 1324 ntTSL 519.64■□□□□ 0.735e-9■■■■■ 55.3
DDX55Q8NHQ9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.735e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-252ENST00000637821 2026 ntTSL 519.32■□□□□ 0.685e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-208ENST00000636461 5083 ntTSL 519.32■□□□□ 0.685e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-229ENST00000636070 1827 ntTSL 219.04■□□□□ 0.645e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-205ENST00000430521 798 ntTSL 518.94■□□□□ 0.625e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.94■□□□□ 0.625e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.82■□□□□ 0.65e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-238ENST00000636803 1945 ntTSL 518.77■□□□□ 0.65e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.565e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-241ENST00000636978 1613 ntTSL 518.49■□□□□ 0.555e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-203ENST00000399379 977 ntTSL 518.48■□□□□ 0.555e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.27■□□□□ 0.525e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-254ENST00000637982 2330 ntTSL 518.14■□□□□ 0.495e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-211ENST00000476127 2152 ntTSL 518.13■□□□□ 0.495e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.07■□□□□ 0.485e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-228ENST00000636023 1780 ntTSL 517.8■□□□□ 0.445e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-213ENST00000476828 1872 ntTSL 317.73■□□□□ 0.435e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-227ENST00000635936 2223 ntTSL 517.61■□□□□ 0.415e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.6■□□□□ 0.415e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.6■□□□□ 0.415e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-214ENST00000478594 2110 ntTSL 517.59■□□□□ 0.415e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-225ENST00000635889 2260 ntTSL 517.44■□□□□ 0.385e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-234ENST00000636587 2040 ntTSL 517.21■□□□□ 0.355e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-257ENST00000638092 2448 ntTSL 517.08■□□□□ 0.335e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-255ENST00000637994 2468 ntTSL 517.01■□□□□ 0.315e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-244ENST00000637114 1991 ntTSL 516.87■□□□□ 0.295e-9■■■■■ 55.3
DDX55Q8NHQ9 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.255e-9■■■■■ 55.3
DDX55Q8NHQ9 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.255e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.59■□□□□ 0.255e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-222ENST00000635772 2768 ntTSL 516.19■□□□□ 0.185e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-212ENST00000476226 2379 ntTSL 516.11■□□□□ 0.175e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-246ENST00000637291 2662 ntTSL 515.81■□□□□ 0.125e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-248ENST00000637457 2815 ntTSL 515.7■□□□□ 0.15e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.15e-9■■■■■ 55.3
DDX55Q8NHQ9 DDX54-206ENST00000549271 756 ntTSL 215.57■□□□□ 0.085e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-219ENST00000495436 843 ntTSL 215.43■□□□□ 0.065e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-245ENST00000637268 2855 ntTSL 515.38■□□□□ 0.055e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-237ENST00000636725 2677 ntTSL 515.37■□□□□ 0.055e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-216ENST00000487589 811 ntTSL 515.36■□□□□ 0.055e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.045e-9■■■■■ 55.3
DDX55Q8NHQ9 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC15.11■□□□□ 0.015e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-226ENST00000635907 876 ntTSL 514.67□□□□□ -0.065e-9■■■■■ 55.3
DDX55Q8NHQ9 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.085e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.49□□□□□ -0.095e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-242ENST00000636991 2403 ntTSL 514.48□□□□□ -0.095e-9■■■■■ 55.3
DDX55Q8NHQ9 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.145e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-215ENST00000480957 3243 ntTSL 414.19□□□□□ -0.145e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-206ENST00000637088 6740 ntTSL 514.14□□□□□ -0.155e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-223ENST00000635798 1276 ntTSL 513.89□□□□□ -0.195e-9■■■■■ 55.3
DDX55Q8NHQ9 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.215e-9■■■■■ 55.3
DDX55Q8NHQ9 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.215e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-202ENST00000636204 3240 ntTSL 513.67□□□□□ -0.225e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-218ENST00000493046 3504 ntTSL 513.22□□□□□ -0.295e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-204ENST00000637442 4178 ntTSL 513.22□□□□□ -0.295e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-217ENST00000491800 3780 nt12.96□□□□□ -0.335e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-236ENST00000636597 1509 ntTSL 5 BASIC12.94□□□□□ -0.345e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-210ENST00000473163 4544 ntTSL 212.82□□□□□ -0.365e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-205ENST00000638079 3146 ntTSL 512.71□□□□□ -0.375e-9■■■■■ 55.3
DDX55Q8NHQ9 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.385e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-201ENST00000638115 4453 ntTSL 512.38□□□□□ -0.435e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-230ENST00000636148 3865 ntTSL 512.24□□□□□ -0.455e-9■■■■■ 55.3
DDX55Q8NHQ9 AC104452.1-207ENST00000638014 4510 ntTSL 512.2□□□□□ -0.465e-9■■■■■ 55.3
DDX55Q8NHQ9 AMT-253ENST00000637914 3677 ntTSL 512.1□□□□□ -0.475e-9■■■■■ 55.3
Retrieved 100 of 15,504 protein–RNA pairs in 486.9 ms