Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 MALAT1-202ENST00000534336 8708 ntBASIC10.31□□□□□ -0.761e-323■□□□□ 8.7
DDX42Q86XP3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.39□□□□□ -1.071e-323■□□□□ 8.7
DDX42Q86XP3 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC8.22□□□□□ -1.091e-323■□□□□ 8.9
DDX42Q86XP3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.41□□□□□ -1.381e-323■□□□□ 8.4
DDX42Q86XP3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.99□□□□□ -1.611e-323■□□□□ 8.7
DDX42Q86XP3 MALAT1-216ENST00000620465 333 ntTSL 24.9□□□□□ -1.631e-323■□□□□ 8.9
DDX42Q86XP3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.79□□□□□ -1.961e-323■□□□□ 8.4
DDX42Q86XP3 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC13.27□□□□□ -0.291e-79■□□□□ 9.1
DDX42Q86XP3 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)22.22■■□□□ 1.154e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-202ENST00000417331 735 ntTSL 520.64■□□□□ 0.894e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-209ENST00000521637 503 ntTSL 318.73■□□□□ 0.594e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-210ENST00000522164 571 ntTSL 217.83■□□□□ 0.444e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.284e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-212ENST00000523930 823 ntTSL 516.02■□□□□ 0.164e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)15.64■□□□□ 0.094e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-211ENST00000523883 3651 ntTSL 211.02□□□□□ -0.654e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-207ENST00000520654 3018 ntTSL 1 (best)9.98□□□□□ -0.814e-53■□□□□ 8.5
DDX42Q86XP3 MT-TF-201ENST00000387314 71 ntBASIC1.28□□□□□ -2.24e-49■□□□□ 8
DDX42Q86XP3 LINC00854-214ENST00000615433 874 ntAPPRIS ALT2 TSL 59.82□□□□□ -0.841e-42■■■■■ 42.3
DDX42Q86XP3 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.951e-42■■■■■ 42.3
DDX42Q86XP3 U2.6-201ENST00000619225 191 ntBASIC2.7□□□□□ -1.981e-42■■■■■ 42.3
DDX42Q86XP3 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.145e-42■□□□□ 11
DDX42Q86XP3 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.365e-42■□□□□ 11
DDX42Q86XP3 HNRNPH1-238ENST00000521116 806 ntTSL 422.2■■□□□ 1.146e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-228ENST00000515714 690 ntTSL 419.95■□□□□ 0.786e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-245ENST00000523137 1563 ntTSL 419.45■□□□□ 0.76e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-212ENST00000505087 592 ntTSL 318.65■□□□□ 0.586e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-207ENST00000503105 559 ntTSL 318.65■□□□□ 0.586e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.5■□□□□ 0.396e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-208ENST00000503664 569 ntTSL 417.5■□□□□ 0.396e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-225ENST00000515158 850 ntTSL 416.67■□□□□ 0.266e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16■□□□□ 0.156e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-226ENST00000515446 368 ntTSL 215.95■□□□□ 0.146e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-213ENST00000505811 1155 ntTSL 515.85■□□□□ 0.136e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.16e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.056e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-249ENST00000524180 997 ntTSL 515□□□□□ -0.016e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-220ENST00000513225 805 ntTSL 414.9□□□□□ -0.026e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.076e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-224ENST00000514731 1371 ntTSL 214.48□□□□□ -0.096e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-218ENST00000510678 1996 ntTSL 514.42□□□□□ -0.16e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.33□□□□□ -0.126e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-215ENST00000508103 610 ntTSL 214.32□□□□□ -0.126e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-209ENST00000504348 594 ntTSL 414.27□□□□□ -0.136e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-223ENST00000514332 2444 ntTSL 214.15□□□□□ -0.146e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-211ENST00000504779 792 ntTSL 514.1□□□□□ -0.156e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-214ENST00000506721 602 ntTSL 514.08□□□□□ -0.166e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-217ENST00000510431 620 ntTSL 213.98□□□□□ -0.176e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-234ENST00000519707 582 ntTSL 213.98□□□□□ -0.176e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-233ENST00000519455 451 ntTSL 413.94□□□□□ -0.186e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-222ENST00000513972 761 ntTSL 213.38□□□□□ -0.276e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-232ENST00000519056 530 ntTSL 412.82□□□□□ -0.366e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-219ENST00000512273 501 ntTSL 49.19□□□□□ -0.946e-33■□□□□ 8.7
DDX42Q86XP3 NEAT1-202ENST00000501122 22743 ntBASIC5.29□□□□□ -1.561e-30■□□□□ 8.3
DDX42Q86XP3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.286e-26■□□□□ 11
DDX42Q86XP3 ACTG1-204ENST00000571721 813 ntTSL 519.89■□□□□ 0.776e-26■□□□□ 11
DDX42Q86XP3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.76e-26■□□□□ 11
DDX42Q86XP3 ACTG1-209ENST00000575659 742 ntTSL 318.09■□□□□ 0.496e-26■□□□□ 11
DDX42Q86XP3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.476e-26■□□□□ 11
DDX42Q86XP3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.026e-26■□□□□ 11
DDX42Q86XP3 ACTG1-215ENST00000576917 1958 ntTSL 514.89□□□□□ -0.036e-26■□□□□ 11
DDX42Q86XP3 ACTG1-205ENST00000572105 1168 ntTSL 514.69□□□□□ -0.066e-26■□□□□ 11
DDX42Q86XP3 ACTG1-203ENST00000571691 761 ntTSL 314.02□□□□□ -0.176e-26■□□□□ 11
DDX42Q86XP3 ACTG1-202ENST00000570382 471 ntTSL 413.78□□□□□ -0.26e-26■□□□□ 11
DDX42Q86XP3 ACTG1-211ENST00000575994 856 ntTSL 313.63□□□□□ -0.236e-26■□□□□ 11
DDX42Q86XP3 ACTG1-213ENST00000576214 1024 ntTSL 513.36□□□□□ -0.276e-26■□□□□ 11
DDX42Q86XP3 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.316e-26■□□□□ 11
DDX42Q86XP3 ACTG1-214ENST00000576544 1720 ntTSL 512.87□□□□□ -0.356e-26■□□□□ 11
DDX42Q86XP3 CCNL2-220ENST00000505849 1503 ntTSL 216.26■□□□□ 0.191e-25■□□□□ 8.7
DDX42Q86XP3 CCNL2-208ENST00000469113 707 ntTSL 314.56□□□□□ -0.081e-25■□□□□ 8.7
DDX42Q86XP3 CCNL2-214ENST00000482365 2620 ntTSL 214.45□□□□□ -0.11e-25■□□□□ 8.7
DDX42Q86XP3 CCNL2-204ENST00000418865 3082 ntTSL 1 (best)11.41□□□□□ -0.581e-25■□□□□ 8.7
DDX42Q86XP3 ACTB-211ENST00000480301 657 ntTSL 1 (best)22.03■■□□□ 1.122e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-212ENST00000484841 1032 ntTSL 521.43■■□□□ 1.022e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-210ENST00000477812 820 ntTSL 220.77■□□□□ 0.922e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.632e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-207ENST00000462494 2245 ntTSL 518.42■□□□□ 0.542e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-205ENST00000432588 568 ntTSL 417.22■□□□□ 0.352e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-206ENST00000443528 569 ntTSL 416.51■□□□□ 0.232e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-202ENST00000414620 561 ntTSL 416.45■□□□□ 0.222e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-204ENST00000425660 1845 ntTSL 1 (best)15.88■□□□□ 0.132e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-209ENST00000473257 556 ntTSL 311.86□□□□□ -0.512e-24■□□□□ 9.3
DDX42Q86XP3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.9□□□□□ -0.022e-24■□□□□ 8.5
DDX42Q86XP3 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.762e-24■□□□□ 8.5
DDX42Q86XP3 ACTB-203ENST00000417101 472 ntTSL 423.12■■□□□ 1.293e-24■□□□□ 9.6
DDX42Q86XP3 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.94□□□□□ -1.34e-24■□□□□ 8.5
DDX42Q86XP3 AC015574.1-204ENST00000612595 512 ntTSL 55.32□□□□□ -1.564e-24■□□□□ 8.5
DDX42Q86XP3 ACTB-213ENST00000493945 1236 ntTSL 515.63■□□□□ 0.098e-24■□□□□ 9.5
DDX42Q86XP3 WDR74-208ENST00000538098 548 ntTSL 418.54■□□□□ 0.568e-23■■■■■ 79
DDX42Q86XP3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.448e-23■■■■■ 79
DDX42Q86XP3 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.078e-23■■■■■ 79
DDX42Q86XP3 HMGB2-204ENST00000506267 629 ntTSL 323.73■■□□□ 1.391e-22■■■□□ 14.6
DDX42Q86XP3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.241e-22■■■□□ 14.6
DDX42Q86XP3 HMGB2-205ENST00000511316 1841 ntTSL 213.69□□□□□ -0.221e-22■■■□□ 14.6
DDX42Q86XP3 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.381e-22■■■□□ 14.6
DDX42Q86XP3 FDFT1-203ENST00000446331 1558 ntTSL 224.66■■□□□ 1.543e-22■■■□□ 15.8
DDX42Q86XP3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.33e-22■■■□□ 15.8
DDX42Q86XP3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.92■■□□□ 1.13e-22■■■□□ 15.8
DDX42Q86XP3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.97■□□□□ 0.953e-22■■■□□ 15.8
DDX42Q86XP3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.88■□□□□ 0.933e-22■■■□□ 15.8
Retrieved 100 of 2,477 protein–RNA pairs in 148.5 ms