Protein: Q01081

U2AF1, Splicing factor U2AF 35 kDa subunit, humanhuman

Known RBP eCLIP

Length 240 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1Q01081 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.096e-7■□□□□ 8.1
U2AF1Q01081 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.096e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-212ENST00000440209 557 ntTSL 415.33■□□□□ 0.046e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.016e-7■□□□□ 8.1
U2AF1Q01081 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC14.97□□□□□ -0.016e-7■□□□□ 8.1
U2AF1Q01081 GLYR1-210ENST00000589389 3606 ntTSL 1 (best)14.4□□□□□ -0.16e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-213ENST00000444960 783 ntTSL 413.65□□□□□ -0.226e-7■□□□□ 8.1
U2AF1Q01081 GLYR1-209ENST00000588732 3527 ntTSL 1 (best)12.89□□□□□ -0.356e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-206ENST00000413688 551 ntTSL 412.55□□□□□ -0.46e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-216ENST00000454017 978 ntTSL 312.55□□□□□ -0.46e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC12.5□□□□□ -0.416e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-208ENST00000425073 546 ntTSL 412.06□□□□□ -0.486e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.566e-7■□□□□ 8.1
U2AF1Q01081 TMEM248-206ENST00000484751 739 ntTSL 211.08□□□□□ -0.646e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.86e-7■□□□□ 8.1
U2AF1Q01081 RPS6KC1-203ENST00000468069 784 ntTSL 37.39□□□□□ -1.236e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-207ENST00000422347 483 ntTSL 56.55□□□□□ -1.366e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-209ENST00000425919 572 ntTSL 56.55□□□□□ -1.366e-7■□□□□ 8.1
U2AF1Q01081 KRIT1-218ENST00000458493 507 ntTSL 46.27□□□□□ -1.416e-7■□□□□ 8.1
U2AF1Q01081 RPS6KC1-204ENST00000490299 5154 ntTSL 1 (best)4.55□□□□□ -1.686e-7■□□□□ 8.1
U2AF1Q01081 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.99■■■■□ 3.356e-8■□□□□ 8.1
U2AF1Q01081 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.336e-8■□□□□ 8.1
U2AF1Q01081 FTCD-212ENST00000498355 1936 ntTSL 235.34■■■■□ 3.256e-8■□□□□ 8.1
U2AF1Q01081 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC34.96■■■■□ 3.196e-8■□□□□ 8.1
U2AF1Q01081 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.976e-8■□□□□ 8.1
U2AF1Q01081 PRPSAP1-204ENST00000436498 1003 ntTSL 326.52■■□□□ 1.846e-8■□□□□ 8.1
U2AF1Q01081 FTCD-210ENST00000488577 447 ntTSL 326.07■■□□□ 1.766e-8■□□□□ 8.1
U2AF1Q01081 FTCD-211ENST00000494498 840 ntTSL 326.07■■□□□ 1.766e-8■□□□□ 8.1
U2AF1Q01081 FTCD-206ENST00000460011 1260 ntTSL 1 (best)25.69■■□□□ 1.76e-8■□□□□ 8.1
U2AF1Q01081 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.876e-8■□□□□ 8.1
U2AF1Q01081 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.486e-8■□□□□ 8.1
U2AF1Q01081 PRPSAP1-201ENST00000324684 1678 ntTSL 2 BASIC13.75□□□□□ -0.216e-8■□□□□ 8.1
U2AF1Q01081 PRPSAP1-203ENST00000435555 916 ntTSL 513.75□□□□□ -0.216e-8■□□□□ 8.1
U2AF1Q01081 PRPSAP1-210ENST00000586137 473 ntTSL 313.75□□□□□ -0.216e-8■□□□□ 8.1
U2AF1Q01081 STK39-203ENST00000487143 2214 ntTSL 1 (best)7.71□□□□□ -1.186e-8■□□□□ 8.1
U2AF1Q01081 CC2D1A-202ENST00000585896 1843 ntTSL 226.21■■□□□ 1.797e-6■□□□□ 8.1
U2AF1Q01081 VWCE-206ENST00000538438 1076 ntTSL 321.34■■□□□ 1.017e-6■□□□□ 8.1
U2AF1Q01081 SPG7-205ENST00000561945 411 ntTSL 319.44■□□□□ 0.77e-6■□□□□ 8.1
U2AF1Q01081 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.09■□□□□ 0.657e-6■□□□□ 8.1
U2AF1Q01081 VWCE-201ENST00000301770 3368 ntTSL 1 (best)18.98■□□□□ 0.637e-6■□□□□ 8.1
U2AF1Q01081 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.587e-6■□□□□ 8.1
U2AF1Q01081 SPG7-207ENST00000563218 654 ntTSL 517.78■□□□□ 0.447e-6■□□□□ 8.1
U2AF1Q01081 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC15.03■□□□□ -07e-6■□□□□ 8.1
U2AF1Q01081 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.147e-6■□□□□ 8.1
U2AF1Q01081 CC2D1A-209ENST00000589679 610 ntTSL 313.88□□□□□ -0.197e-6■□□□□ 8.1
U2AF1Q01081 TTLL4-211ENST00000448224 583 ntTSL 513.86□□□□□ -0.197e-6■□□□□ 8.1
U2AF1Q01081 ARHGAP5-208ENST00000555814 583 ntTSL 411.85□□□□□ -0.517e-6■□□□□ 8.1
U2AF1Q01081 ARHGAP5-209ENST00000556191 654 ntTSL 43.19□□□□□ -1.97e-6■□□□□ 8.1
U2AF1Q01081 NFATC2IP-202ENST00000562977 638 ntTSL 435.35■■■■□ 3.255e-7■□□□□ 8.1
U2AF1Q01081 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.435e-7■□□□□ 8.1
U2AF1Q01081 TRIM28-206ENST00000595974 665 ntTSL 321.68■■□□□ 1.065e-13■□□□□ 8.1
U2AF1Q01081 TRIM28-213ENST00000598355 714 ntTSL 221.59■■□□□ 1.055e-13■□□□□ 8.1
U2AF1Q01081 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC17.35■□□□□ 0.375e-7■□□□□ 8.1
U2AF1Q01081 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC12.33□□□□□ -0.445e-7■□□□□ 8.1
U2AF1Q01081 TRIM28-214ENST00000600840 338 ntTSL 211.6□□□□□ -0.555e-13■□□□□ 8.1
U2AF1Q01081 CALCOCO1-217ENST00000549935 2112 ntTSL 516.15■□□□□ 0.182e-7■□□□□ 8.1
U2AF1Q01081 NEAT1_3.1-201ENST00000613347 159 ntBASIC14.87□□□□□ -0.031e-323■□□□□ 8
U2AF1Q01081 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.6■■□□□ 1.855e-6■□□□□ 8
U2AF1Q01081 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.78■■□□□ 1.245e-6■□□□□ 8
U2AF1Q01081 FMO5-205ENST00000527849 2410 ntTSL 522.43■■□□□ 1.185e-6■□□□□ 8
U2AF1Q01081 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.04■□□□□ 0.965e-6■□□□□ 8
U2AF1Q01081 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.825e-6■□□□□ 8
U2AF1Q01081 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.83■□□□□ 0.775e-6■□□□□ 8
U2AF1Q01081 STK36-215ENST00000486644 730 ntTSL 518.93■□□□□ 0.625e-6■□□□□ 8
U2AF1Q01081 PABPC4-219ENST00000525045 765 ntTSL 218.82■□□□□ 0.65e-6■□□□□ 8
U2AF1Q01081 PABPC4-205ENST00000421687 1663 ntTSL 518.73■□□□□ 0.595e-6■□□□□ 8
U2AF1Q01081 PABPC4-216ENST00000492468 2257 ntTSL 218.45■□□□□ 0.545e-6■□□□□ 8
U2AF1Q01081 PABPC4-212ENST00000477556 413 ntTSL 317.54■□□□□ 0.45e-6■□□□□ 8
U2AF1Q01081 STK36-209ENST00000462031 582 ntTSL 216.72■□□□□ 0.275e-6■□□□□ 8
U2AF1Q01081 PABPC4-215ENST00000484555 450 ntTSL 516.57■□□□□ 0.245e-6■□□□□ 8
U2AF1Q01081 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.195e-6■□□□□ 8
U2AF1Q01081 PABPC4-206ENST00000437136 876 ntTSL 516.16■□□□□ 0.185e-6■□□□□ 8
U2AF1Q01081 MAGED1-209ENST00000485420 2906 ntTSL 515.79■□□□□ 0.125e-6■□□□□ 8
U2AF1Q01081 MAGED1-203ENST00000375722 2806 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.085e-6■□□□□ 8
U2AF1Q01081 COG4-205ENST00000526700 1978 ntTSL 515.42■□□□□ 0.065e-6■□□□□ 8
U2AF1Q01081 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC15.05■□□□□ 05e-6■□□□□ 8
U2AF1Q01081 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.065e-6■□□□□ 8
U2AF1Q01081 COG4-201ENST00000323786 2833 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.095e-6■□□□□ 8
U2AF1Q01081 COG4-203ENST00000482252 2953 ntTSL 214.37□□□□□ -0.115e-6■□□□□ 8
U2AF1Q01081 COG4-211ENST00000564415 3000 ntTSL 514.02□□□□□ -0.175e-6■□□□□ 8
U2AF1Q01081 STK36-204ENST00000419433 2093 ntTSL 213.73□□□□□ -0.215e-6■□□□□ 8
U2AF1Q01081 MAGED1-210ENST00000494718 5418 ntTSL 213□□□□□ -0.335e-6■□□□□ 8
U2AF1Q01081 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.345e-6■□□□□ 8
U2AF1Q01081 COG4-207ENST00000530314 3488 ntTSL 1 (best)12.57□□□□□ -0.45e-6■□□□□ 8
U2AF1Q01081 PABPC4-209ENST00000468476 3592 ntTSL 211.6□□□□□ -0.555e-6■□□□□ 8
U2AF1Q01081 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC10.7□□□□□ -0.75e-6■□□□□ 8
U2AF1Q01081 PABPC4-222ENST00000527718 746 ntTSL 58.16□□□□□ -1.15e-6■□□□□ 8
U2AF1Q01081 A2M-202ENST00000404455 623 ntTSL 57.12□□□□□ -1.274e-10■□□□□ 8
U2AF1Q01081 A2M-209ENST00000539638 590 ntTSL 47.12□□□□□ -1.274e-10■□□□□ 8
U2AF1Q01081 DDB1-220ENST00000542337 558 ntTSL 327.06■■□□□ 1.923e-7■□□□□ 8
U2AF1Q01081 DDB1-222ENST00000543627 540 ntTSL 514.81□□□□□ -0.043e-7■□□□□ 8
U2AF1Q01081 DDB1-214ENST00000539426 805 ntTSL 314.57□□□□□ -0.083e-7■□□□□ 8
U2AF1Q01081 DDB1-221ENST00000543162 575 ntTSL 414.22□□□□□ -0.133e-7■□□□□ 8
U2AF1Q01081 DDB1-206ENST00000535283 1220 ntTSL 212.93□□□□□ -0.343e-7■□□□□ 8
U2AF1Q01081 DDB1-208ENST00000537120 1215 ntTSL 211.21□□□□□ -0.613e-7■□□□□ 8
U2AF1Q01081 DDB1-210ENST00000538129 475 ntTSL 27.89□□□□□ -1.153e-7■□□□□ 8
Retrieved 96 of 10,096 protein–RNA pairs in 332.1 ms