Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.513e-6■□□□□ 8
SUB1P53999 ISYNA1-211ENST00000582811 2039 ntTSL 217.37■□□□□ 0.373e-6■□□□□ 8
SUB1P53999 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.173e-6■□□□□ 8
SUB1P53999 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.07■□□□□ 03e-6■□□□□ 8
SUB1P53999 SLC6A6-203ENST00000610642 1983 ntTSL 214.98□□□□□ -0.013e-6■□□□□ 8
SUB1P53999 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.93□□□□□ -0.023e-6■□□□□ 8
SUB1P53999 NOSIP-216ENST00000601340 2197 ntTSL 214.46□□□□□ -0.13e-6■□□□□ 8
SUB1P53999 ISYNA1-210ENST00000582770 1654 ntTSL 214.03□□□□□ -0.163e-6■□□□□ 8
SUB1P53999 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.89□□□□□ -0.193e-6■□□□□ 8
SUB1P53999 SLC6A6-209ENST00000622176 1116 ntTSL 1 (best)13.52□□□□□ -0.253e-6■□□□□ 8
SUB1P53999 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.31□□□□□ -0.283e-6■□□□□ 8
SUB1P53999 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.22□□□□□ -0.291e-16■□□□□ 8
SUB1P53999 SLC6A6-206ENST00000615188 689 ntTSL 312.66□□□□□ -0.383e-6■□□□□ 8
SUB1P53999 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.393e-6■□□□□ 8
SUB1P53999 ISYNA1-209ENST00000582287 696 ntTSL 1 (best)12.62□□□□□ -0.393e-6■□□□□ 8
SUB1P53999 IRAK1-211ENST00000463031 357 ntTSL 312.29□□□□□ -0.443e-6■□□□□ 8
SUB1P53999 NOSIP-212ENST00000599537 833 ntTSL 511.83□□□□□ -0.523e-6■□□□□ 8
SUB1P53999 EDC4-214ENST00000577105 580 ntTSL 311.76□□□□□ -0.533e-6■□□□□ 8
SUB1P53999 NOSIP-209ENST00000598820 2615 ntTSL 211.71□□□□□ -0.533e-6■□□□□ 8
SUB1P53999 NOSIP-213ENST00000600019 1167 ntTSL 511.59□□□□□ -0.553e-6■□□□□ 8
SUB1P53999 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.583e-6■□□□□ 8
SUB1P53999 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.22□□□□□ -0.613e-6■□□□□ 8
SUB1P53999 SLC6A6-202ENST00000452775 458 ntTSL 411.13□□□□□ -0.633e-6■□□□□ 8
SUB1P53999 ISYNA1-203ENST00000577820 1466 ntTSL 511.05□□□□□ -0.643e-6■□□□□ 8
SUB1P53999 ISYNA1-214ENST00000583816 860 ntTSL 311.01□□□□□ -0.653e-6■□□□□ 8
SUB1P53999 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.693e-6■□□□□ 8
SUB1P53999 SLC6A6-207ENST00000618278 6401 ntTSL 510.38□□□□□ -0.753e-6■□□□□ 8
SUB1P53999 NOSIP-206ENST00000598296 529 ntTSL 310.31□□□□□ -0.763e-6■□□□□ 8
SUB1P53999 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.83e-6■□□□□ 8
SUB1P53999 EDC4-207ENST00000573992 3934 ntTSL 1 (best)9.64□□□□□ -0.873e-6■□□□□ 8
SUB1P53999 ISYNA1-212ENST00000583309 371 ntTSL 29.55□□□□□ -0.883e-6■□□□□ 8
SUB1P53999 NOSIP-203ENST00000594932 602 ntTSL 59□□□□□ -0.973e-6■□□□□ 8
SUB1P53999 NOSIP-202ENST00000593345 933 ntTSL 38.66□□□□□ -1.023e-6■□□□□ 8
SUB1P53999 ESYT1-204ENST00000548142 563 ntTSL 38.48□□□□□ -1.053e-6■□□□□ 8
SUB1P53999 H2AFZ-205ENST00000527366 435 ntTSL 38.44□□□□□ -1.063e-6■□□□□ 8
SUB1P53999 ESYT1-207ENST00000550878 646 ntTSL 58.42□□□□□ -1.063e-6■□□□□ 8
SUB1P53999 AC040162.3-201ENST00000572067 3907 ntBASIC8.35□□□□□ -1.073e-6■□□□□ 8
SUB1P53999 RFK-205ENST00000483155 962 ntTSL 28.07□□□□□ -1.123e-6■□□□□ 8
SUB1P53999 ISYNA1-207ENST00000581672 793 ntTSL 27.87□□□□□ -1.153e-6■□□□□ 8
SUB1P53999 MARS-228ENST00000552371 699 ntTSL 37.69□□□□□ -1.183e-6■□□□□ 8
SUB1P53999 RFK-206ENST00000490113 2386 ntTSL 27.53□□□□□ -1.23e-6■□□□□ 8
SUB1P53999 NOSIP-207ENST00000598544 429 ntTSL 37.43□□□□□ -1.223e-6■□□□□ 8
SUB1P53999 HSPA8-208ENST00000526686 740 ntTSL 1 (best)2.76□□□□□ -1.973e-6■□□□□ 8
SUB1P53999 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.91□□□□□ -2.13e-6■□□□□ 8
Retrieved 44 of 11,644 protein–RNA pairs in 337.3 ms