Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.84□□□□□ -0.511e-17■■■■■ 176.9
NCBP2P52298 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.243e-31■■■■■ 162.9
NCBP2P52298 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.343e-31■■■■■ 162.9
NCBP2P52298 SYCP2L-202ENST00000341041 3069 ntTSL 211.33□□□□□ -0.63e-31■■■■■ 162.9
NCBP2P52298 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.396e-34■■■■■ 154.9
NCBP2P52298 SMC4-212ENST00000470240 724 ntTSL 37.57□□□□□ -1.26e-34■■■■■ 154.9
NCBP2P52298 SMC4-227ENST00000497984 563 ntTSL 51.68□□□□□ -2.146e-34■■■■■ 154.9
NCBP2P52298 SMC4-219ENST00000487747 637 ntTSL 51.41□□□□□ -2.186e-34■■■■■ 154.9
NCBP2P52298 MIR15B-201ENST00000385045 98 ntBASIC0.72□□□□□ -2.296e-34■■■■■ 154.9
NCBP2P52298 SNORD3B-1-201ENST00000577988 758 ntBASIC12.87□□□□□ -0.356e-29■■■■■ 103.3
NCBP2P52298 SNORD3B-1-203ENST00000631292 217 nt10.4□□□□□ -0.746e-29■■■■■ 103.3
NCBP2P52298 SNORD3B-1-202ENST00000617128 218 nt10.37□□□□□ -0.756e-29■■■■■ 103.3
NCBP2P52298 RPS8-208ENST00000497035 694 ntTSL 313.8□□□□□ -0.24e-22■■■■■ 77
NCBP2P52298 RPS8-204ENST00000470475 981 ntTSL 213.34□□□□□ -0.274e-22■■■■■ 77
NCBP2P52298 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.754e-22■■■■■ 77
NCBP2P52298 RPS8-201ENST00000372209 685 ntTSL 2 BASIC9.76□□□□□ -0.854e-22■■■■■ 77
NCBP2P52298 SMC4-221ENST00000489573 1553 ntTSL 1 (best)20.42■□□□□ 0.862e-17■■■■■ 76.5
NCBP2P52298 SMC4-209ENST00000468653 1756 ntTSL 217.94■□□□□ 0.462e-17■■■■■ 76.5
NCBP2P52298 SMC4-211ENST00000469858 1971 ntTSL 217.15■□□□□ 0.342e-17■■■■■ 76.5
NCBP2P52298 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.24■□□□□ 0.032e-17■■■■■ 76.5
NCBP2P52298 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-17■■■■■ 76.5
NCBP2P52298 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC9.61□□□□□ -0.872e-17■■■■■ 76.5
NCBP2P52298 SMC4-214ENST00000472991 582 ntTSL 58.44□□□□□ -1.062e-17■■■■■ 76.5
NCBP2P52298 SMC4-213ENST00000472282 667 ntTSL 38.44□□□□□ -1.062e-17■■■■■ 76.5
NCBP2P52298 SMC4-208ENST00000467468 566 ntTSL 42.9□□□□□ -1.952e-17■■■■■ 76.5
NCBP2P52298 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC12.06□□□□□ -0.481e-22■■■■■ 75.5
NCBP2P52298 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.7■□□□□ 0.423e-18■■■■■ 75.2
NCBP2P52298 AL390728.4-204ENST00000606454 660 ntTSL 314.02□□□□□ -0.173e-18■■■■■ 75.2
NCBP2P52298 AL390728.4-203ENST00000606212 637 ntTSL 312.56□□□□□ -0.43e-18■■■■■ 75.2
NCBP2P52298 AL390728.4-202ENST00000606173 430 ntTSL 3 BASIC10.98□□□□□ -0.653e-18■■■■■ 75.2
NCBP2P52298 RPS8-207ENST00000485390 1115 ntTSL 1 (best)18.77■□□□□ 0.68e-22■■■■■ 72.9
NCBP2P52298 HS1BP3-206ENST00000446825 841 ntTSL 313.03□□□□□ -0.325e-19■■■■■ 72.3
NCBP2P52298 HS1BP3-204ENST00000415264 414 ntTSL 310.91□□□□□ -0.665e-19■■■■■ 72.3
NCBP2P52298 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.624e-19■■■■■ 71.7
NCBP2P52298 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.81■□□□□ 0.64e-19■■■■■ 71.7
NCBP2P52298 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.64■□□□□ 0.094e-19■■■■■ 71.7
NCBP2P52298 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.134e-19■■■■■ 71.7
NCBP2P52298 TMEM41B-201ENST00000299596 1443 ntTSL 1 (best)12.63□□□□□ -0.394e-19■■■■■ 71.7
NCBP2P52298 TMEM41B-202ENST00000524543 3848 ntTSL 210.81□□□□□ -0.684e-19■■■■■ 71.7
NCBP2P52298 RN7SL2-201ENST00000490232 300 ntBASIC11.76□□□□□ -0.537e-64■■■■■ 69.3
NCBP2P52298 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC8.95□□□□□ -0.987e-64■■■■■ 69.3
NCBP2P52298 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC8.03□□□□□ -1.127e-64■■■■■ 69.3
NCBP2P52298 THUMPD3-AS1-213ENST00000520629 415 ntTSL 314.2□□□□□ -0.143e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-206ENST00000489616 583 ntTSL 214.03□□□□□ -0.163e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.5□□□□□ -0.253e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.23□□□□□ -0.293e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.51□□□□□ -1.213e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.51□□□□□ -1.693e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-218ENST00000522525 1867 ntTSL 1 (best)4.39□□□□□ -1.713e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.1□□□□□ -1.753e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-214ENST00000521267 851 ntTSL 34.1□□□□□ -1.753e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-201ENST00000467069 667 ntTSL 53.66□□□□□ -1.823e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-207ENST00000494680 544 ntTSL 53.45□□□□□ -1.863e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-219ENST00000523354 459 ntTSL 23.21□□□□□ -1.93e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-217ENST00000522221 979 ntTSL 23.04□□□□□ -1.923e-9■■■■■ 68.6
NCBP2P52298 THUMPD3-AS1-211ENST00000520396 550 ntTSL 32.82□□□□□ -1.963e-9■■■■■ 68.6
NCBP2P52298 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.83□□□□□ -1.164e-17■■■■■ 60.6
NCBP2P52298 SPOPL-203ENST00000430968 558 ntTSL 522.43■■□□□ 1.183e-25■■■■■ 57.8
NCBP2P52298 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.483e-25■■■■■ 57.8
NCBP2P52298 THEM7P-201ENST00000419556 672 ntBASIC5.7□□□□□ -1.52e-12■■■■■ 57.4
NCBP2P52298 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.961e-8■■■■■ 56.3
NCBP2P52298 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.841e-8■■■■■ 56.3
NCBP2P52298 PSPH-204ENST00000416592 739 ntTSL 514.84□□□□□ -0.031e-8■■■■■ 56.3
NCBP2P52298 PSPH-206ENST00000421312 633 ntTSL 513.69□□□□□ -0.221e-8■■■■■ 56.3
NCBP2P52298 PSPH-210ENST00000437355 1409 ntTSL 512.85□□□□□ -0.351e-8■■■■■ 56.3
NCBP2P52298 PSPH-203ENST00000413218 539 ntTSL 412.73□□□□□ -0.371e-8■■■■■ 56.3
NCBP2P52298 PSPH-208ENST00000424596 555 ntTSL 412.33□□□□□ -0.441e-8■■■■■ 56.3
NCBP2P52298 RNU6-9-201ENST00000384776 107 ntBASIC1.58□□□□□ -2.164e-51■■■■■ 55.3
NCBP2P52298 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC11.9□□□□□ -0.52e-10■■■■■ 54.6
NCBP2P52298 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.17□□□□□ -0.31e-43■■■■■ 53.4
NCBP2P52298 SNHG25-201ENST00000580828 106 ntTSL 211.12□□□□□ -0.631e-43■■■■■ 53.4
NCBP2P52298 FRYL-218ENST00000514783 2031 ntTSL 1 (best)14.75□□□□□ -0.056e-12■■■■■ 53.3
NCBP2P52298 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.36□□□□□ -1.236e-12■■■■■ 53.3
NCBP2P52298 FRYL-212ENST00000509886 692 ntTSL 1 (best)3.23□□□□□ -1.896e-12■■■■■ 53.3
NCBP2P52298 FRYL-207ENST00000505437 443 ntTSL 31.95□□□□□ -2.16e-12■■■■■ 53.3
NCBP2P52298 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.361e-15■■■■■ 53
NCBP2P52298 IVNS1ABP-204ENST00000459929 3657 ntTSL 512.23□□□□□ -0.451e-15■■■■■ 53
NCBP2P52298 SCLY-219ENST00000497256 458 ntTSL 221.13■□□□□ 0.971e-28■■■■■ 50.8
NCBP2P52298 SCLY-211ENST00000443532 968 ntTSL 520.66■□□□□ 0.91e-28■■■■■ 50.8
NCBP2P52298 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.761e-28■■■■■ 50.8
NCBP2P52298 SCLY-204ENST00000413463 542 ntTSL 518.16■□□□□ 0.51e-28■■■■■ 50.8
NCBP2P52298 SCLY-212ENST00000446202 548 ntTSL 418.16■□□□□ 0.51e-28■■■■■ 50.8
NCBP2P52298 SCLY-203ENST00000412508 585 ntTSL 214.92□□□□□ -0.021e-28■■■■■ 50.8
NCBP2P52298 SCLY-215ENST00000480357 5668 ntTSL 1 (best)14.5□□□□□ -0.091e-28■■■■■ 50.8
NCBP2P52298 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.25□□□□□ -0.131e-28■■■■■ 50.8
NCBP2P52298 SCLY-205ENST00000416757 807 ntTSL 213.88□□□□□ -0.191e-28■■■■■ 50.8
NCBP2P52298 SCLY-206ENST00000423324 628 ntTSL 413.5□□□□□ -0.251e-28■■■■■ 50.8
NCBP2P52298 SCLY-218ENST00000487197 770 ntTSL 27.13□□□□□ -1.271e-28■■■■■ 50.8
NCBP2P52298 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.464e-45■■■■■ 49.9
NCBP2P52298 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.224e-45■■■■■ 49.9
NCBP2P52298 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.214e-45■■■■■ 49.9
NCBP2P52298 TRA2A-208ENST00000490942 862 ntTSL 1 (best)14.73□□□□□ -0.054e-45■■■■■ 49.9
NCBP2P52298 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.094e-45■■■■■ 49.9
NCBP2P52298 TRA2A-203ENST00000448549 582 ntTSL 414□□□□□ -0.174e-45■■■■■ 49.9
NCBP2P52298 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)11.59□□□□□ -0.554e-45■■■■■ 49.9
NCBP2P52298 C12orf57-203ENST00000538392 979 ntTSL 217.24■□□□□ 0.359e-8■■■■■ 49
NCBP2P52298 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.11□□□□□ -0.319e-8■■■■■ 49
NCBP2P52298 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC10.12□□□□□ -0.799e-8■■■■■ 49
NCBP2P52298 C12orf57-207ENST00000545581 556 ntTSL 38.53□□□□□ -1.049e-8■■■■■ 49
NCBP2P52298 C12orf57-205ENST00000542222 640 ntTSL 28.4□□□□□ -1.069e-8■■■■■ 49
Retrieved 100 of 18,329 protein–RNA pairs in 488.5 ms