Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.68■□□□□ 0.267e-82■□□□□ 9.4
SFPQP23246 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.69□□□□□ -1.665e-64■□□□□ 10.5
SFPQP23246 NEAT1-202ENST00000501122 22743 ntBASIC5.54□□□□□ -1.525e-49■□□□□ 11
SFPQP23246 AC007608.4-201ENST00000623140 3365 ntBASIC13.94□□□□□ -0.182e-21■□□□□ 9.8
SFPQP23246 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.763e-16■□□□□ 9.7
SFPQP23246 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.723e-16■□□□□ 9.7
SFPQP23246 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.243e-16■□□□□ 9.7
SFPQP23246 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)15.56■□□□□ 0.089e-16■□□□□ 9
SFPQP23246 FAM169A-202ENST00000506954 571 ntTSL 410.35□□□□□ -0.759e-16■□□□□ 9
SFPQP23246 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.93■□□□□ 0.781e-15■■■□□ 16.1
SFPQP23246 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.761e-15■■■□□ 16.1
SFPQP23246 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.721e-15■■■□□ 16.1
SFPQP23246 INS-IGF2-201ENST00000356578 1706 ntTSL 519.28■□□□□ 0.681e-15■■■□□ 16.1
SFPQP23246 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.121e-15■■■□□ 16.1
SFPQP23246 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC13.85□□□□□ -0.191e-15■■■□□ 16.1
SFPQP23246 RNASET2-209ENST00000499370 2164 ntTSL 212.73□□□□□ -0.371e-14■■■□□ 15.9
SFPQP23246 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.29■□□□□ 0.042e-14■□□□□ 9.3
SFPQP23246 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.289e-14■□□□□ 10.8
SFPQP23246 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.799e-14■□□□□ 10.8
SFPQP23246 TAF15-203ENST00000603393 1214 ntTSL 1 (best)18.78■□□□□ 0.69e-14■□□□□ 10.8
SFPQP23246 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.399e-14■□□□□ 10.8
SFPQP23246 TAF15-212ENST00000604879 808 ntTSL 514.74□□□□□ -0.059e-14■□□□□ 10.8
SFPQP23246 TAF15-201ENST00000603067 580 ntTSL 57.33□□□□□ -1.249e-14■□□□□ 10.8
SFPQP23246 TTC3-216ENST00000479930 8998 ntTSL 1 (best)9.99□□□□□ -0.812e-13■■■■□ 26
SFPQP23246 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.182e-13■■■■□ 26
SFPQP23246 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.52e-13■■■■□ 26
SFPQP23246 ABCD3-204ENST00000468860 661 ntTSL 320.22■□□□□ 0.832e-13■■■□□ 14.7
SFPQP23246 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC13.41□□□□□ -0.262e-13■■■□□ 14.7
SFPQP23246 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.052e-13■■■□□ 14.7
SFPQP23246 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.742e-13■□□□□ 8.7
SFPQP23246 BMP4-203ENST00000558489 605 ntTSL 316.87■□□□□ 0.293e-13■□□□□ 9.5
SFPQP23246 MIR4651-201ENST00000582622 73 ntBASIC22.73■■□□□ 1.233e-13■□□□□ 10.2
SFPQP23246 ASPSCR1-204ENST00000577733 5503 ntTSL 219.59■□□□□ 0.737e-13■■□□□ 12.6
SFPQP23246 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.439e-13■■■□□ 14.8
SFPQP23246 PANK2-202ENST00000336066 1843 ntTSL 1 (best)27.2■■□□□ 1.959e-13■■■□□ 14.8
SFPQP23246 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.799e-13■■■□□ 14.8
SFPQP23246 PANK2-205ENST00000495692 967 ntTSL 321.42■■□□□ 1.029e-13■■■□□ 14.8
SFPQP23246 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.59e-13■■■□□ 14.8
SFPQP23246 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC14.27□□□□□ -0.139e-13■■■□□ 14.8
SFPQP23246 PANK2-204ENST00000471830 622 ntTSL 36.99□□□□□ -1.299e-13■■■□□ 14.8
SFPQP23246 AL109614.1-201ENST00000620327 419 ntBASIC9.94□□□□□ -0.822e-12■■□□□ 13.7
SFPQP23246 WDR4-207ENST00000492742 2205 ntTSL 222.93■■□□□ 1.262e-12■□□□□ 9
SFPQP23246 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.262e-12■□□□□ 9
SFPQP23246 WDR4-205ENST00000476326 1977 ntTSL 1 (best)17.09■□□□□ 0.332e-12■□□□□ 9
SFPQP23246 ASPSCR1-205ENST00000578236 3277 ntTSL 215.62■□□□□ 0.092e-12■■□□□ 12.1
SFPQP23246 BCL6-205ENST00000438077 709 ntTSL 323.14■■□□□ 1.292e-12■■■■□ 24
SFPQP23246 ASPSCR1-210ENST00000581608 2387 ntTSL 223.61■■□□□ 1.373e-12■■□□□ 11.8
SFPQP23246 PTTG1IP-206ENST00000480234 398 ntTSL 322.64■■□□□ 1.214e-12■■□□□ 13.2
SFPQP23246 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.26■□□□□ 0.994e-12■■□□□ 13.2
SFPQP23246 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.954e-12■■□□□ 13.2
SFPQP23246 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.82■□□□□ 0.924e-12■■□□□ 13.2
SFPQP23246 PTTG1IP-207ENST00000494690 612 ntTSL 513.65□□□□□ -0.225e-12■■□□□ 13.2
SFPQP23246 FAM169A-206ENST00000514200 751 ntTSL 420.32■□□□□ 0.845e-12■■□□□ 11.5
SFPQP23246 FAM169A-205ENST00000513277 803 ntTSL 319.17■□□□□ 0.665e-12■■□□□ 11.5
SFPQP23246 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.11□□□□□ -1.595e-12■■□□□ 11.5
SFPQP23246 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.645e-12■■□□□ 11.5
SFPQP23246 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.87■□□□□ 0.299e-12■■□□□ 13.2
SFPQP23246 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.46■□□□□ 0.391e-11■■■■■ 41.9
SFPQP23246 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.111e-11■■■■■ 41.9
SFPQP23246 ATXN10-204ENST00000435026 653 ntTSL 311.17□□□□□ -0.621e-11■■■■■ 41.9
SFPQP23246 ATXN10-205ENST00000451241 514 ntTSL 36□□□□□ -1.451e-11■■■■■ 41.9
SFPQP23246 ATXN10-210ENST00000493643 617 ntTSL 55.35□□□□□ -1.551e-11■■■■■ 41.9
SFPQP23246 ELF1-202ENST00000405737 903 ntTSL 218.99■□□□□ 0.632e-11■■□□□ 12.7
SFPQP23246 FAM208B-205ENST00000473789 506 ntTSL 526.97■■□□□ 1.913e-11■□□□□ 10.3
SFPQP23246 FAM208B-210ENST00000496681 522 ntTSL 326.33■■□□□ 1.813e-11■□□□□ 10.3
SFPQP23246 FAM208B-207ENST00000480839 540 ntTSL 321.54■■□□□ 1.043e-11■□□□□ 10.3
SFPQP23246 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.673e-11■□□□□ 10.3
SFPQP23246 FAM208B-206ENST00000477043 514 ntTSL 218.69■□□□□ 0.583e-11■□□□□ 10.3
SFPQP23246 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.86■■□□□ 1.573e-11■□□□□ 8.6
SFPQP23246 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.136e-11■■■■□ 24.5
SFPQP23246 RORA-206ENST00000557822 545 ntTSL 417.22■□□□□ 0.356e-11■■■■□ 24.5
SFPQP23246 RORA-210ENST00000559343 577 ntTSL 414.04□□□□□ -0.166e-11■■■■□ 24.5
SFPQP23246 RORA-212ENST00000560004 544 ntTSL 412.56□□□□□ -0.46e-11■■■■□ 24.5
SFPQP23246 RORA-207ENST00000558234 3910 ntTSL 1 (best)12.52□□□□□ -0.416e-11■■■■□ 24.5
SFPQP23246 RORA-205ENST00000551975 749 ntTSL 311.21□□□□□ -0.616e-11■■■■□ 24.5
SFPQP23246 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC9.21□□□□□ -0.936e-11■■■■□ 24.5
SFPQP23246 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.01□□□□□ -1.136e-11■■■■□ 24.5
SFPQP23246 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.166e-11■■■■□ 24.5
SFPQP23246 RAB10-204ENST00000495146 1292 ntTSL 525.91■■□□□ 1.746e-11■■■■□ 21.5
SFPQP23246 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.096e-11■■■■□ 21.5
SFPQP23246 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.367e-11■■□□□ 12.2
SFPQP23246 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.227e-11■■□□□ 12.2
SFPQP23246 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.187e-11■■□□□ 12.2
SFPQP23246 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.427e-11■■□□□ 12.2
SFPQP23246 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.177e-11■■□□□ 12.2
SFPQP23246 DLGAP4-214ENST00000491207 469 ntTSL 415.81■□□□□ 0.127e-11■■□□□ 12.2
SFPQP23246 DLGAP4-211ENST00000482037 603 ntTSL 514.7□□□□□ -0.067e-11■■□□□ 12.2
SFPQP23246 DLGAP4-212ENST00000482872 839 ntTSL 514.29□□□□□ -0.127e-11■■□□□ 12.2
SFPQP23246 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.157e-11■■□□□ 12.2
SFPQP23246 DLGAP4-215ENST00000495241 794 ntTSL 212.45□□□□□ -0.427e-11■■□□□ 12.2
SFPQP23246 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.017e-11■■■□□ 14.8
SFPQP23246 SLC16A3-204ENST00000578522 535 ntTSL 418.53■□□□□ 0.567e-11■■■□□ 14.8
SFPQP23246 PTP4A1-203ENST00000473334 638 ntTSL 325.17■■□□□ 1.628e-11■□□□□ 10.5
SFPQP23246 SLC16A3-210ENST00000580189 872 ntTSL 521.37■■□□□ 1.019e-11■■■□□ 15.6
SFPQP23246 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.521e-10■■□□□ 13.1
SFPQP23246 TFB1M-204ENST00000470239 433 ntTSL 315.26■□□□□ 0.031e-10■□□□□ 9.4
SFPQP23246 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.541e-10■□□□□ 9.4
SFPQP23246 TFB1M-209ENST00000495806 444 ntTSL 37.6□□□□□ -1.191e-10■□□□□ 9.4
SFPQP23246 TFB1M-203ENST00000468889 621 ntTSL 34.82□□□□□ -1.641e-10■□□□□ 9.4
SFPQP23246 TFB1M-208ENST00000489874 563 ntTSL 33.21□□□□□ -1.91e-10■□□□□ 9.4
Retrieved 100 of 4,991 protein–RNA pairs in 227.7 ms