Protein: P05455

SSB, Lupus La protein, humanhuman

Known RBP eCLIP

Length 408 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP05455 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.95■■□□□ 1.916e-71■■■■■ 133.1
SSBP05455 SH2B1-209ENST00000563674 719 ntTSL 325.3■■□□□ 1.646e-71■■■■■ 133.1
SSBP05455 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.46e-71■■■■■ 133.1
SSBP05455 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.126e-71■■■■■ 133.1
SSBP05455 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.28■□□□□ 0.686e-71■■■■■ 133.1
SSBP05455 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.7■□□□□ 0.586e-71■■■■■ 133.1
SSBP05455 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.45■□□□□ 0.546e-71■■■■■ 133.1
SSBP05455 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.75■□□□□ 0.436e-71■■■■■ 133.1
SSBP05455 SH2B1-214ENST00000569471 791 ntTSL 316.08■□□□□ 0.166e-71■■■■■ 133.1
SSBP05455 RPPH1-201ENST00000516869 333 ntBASIC21.94■■□□□ 1.11e-323■■■■■ 131.8
SSBP05455 AL355075.4-201ENST00000554988 638 ntBASIC21.45■■□□□ 1.021e-323■■■■■ 131.8
SSBP05455 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC14.25□□□□□ -0.133e-10■■■■■ 116.5
SSBP05455 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.341e-323■■■■■ 104.6
SSBP05455 VTRNA1-1-201ENST00000363120 99 ntBASIC2.89□□□□□ -1.953e-25■■■■■ 93.3
SSBP05455 THEM7P-201ENST00000419556 672 ntBASIC7.35□□□□□ -1.234e-16■■■■■ 70.4
SSBP05455 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.613e-15■■■■■ 65.1
SSBP05455 AC124068.2-201ENST00000569473 1109 ntBASIC16.16■□□□□ 0.181e-15■■■■■ 61.6
SSBP05455 RMRP-201ENST00000602361 268 ntBASIC12.19□□□□□ -0.461e-323■■■■■ 59.7
SSBP05455 RMRP-202ENST00000363046 264 ntBASIC10.6□□□□□ -0.711e-323■■■■■ 59.7
SSBP05455 RN7SKP230-201ENST00000365642 335 ntBASIC16.67■□□□□ 0.263e-7■■■■■ 55.8
SSBP05455 SMC4-221ENST00000489573 1553 ntTSL 1 (best)24.18■■□□□ 1.469e-17■■■■■ 55.5
SSBP05455 SMC4-209ENST00000468653 1756 ntTSL 221.22■□□□□ 0.999e-17■■■■■ 55.5
SSBP05455 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.919e-17■■■■■ 55.5
SSBP05455 SMC4-211ENST00000469858 1971 ntTSL 220.29■□□□□ 0.849e-17■■■■■ 55.5
SSBP05455 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.05■□□□□ 0.489e-17■■■■■ 55.5
SSBP05455 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.039e-17■■■■■ 55.5
SSBP05455 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC11.24□□□□□ -0.619e-17■■■■■ 55.5
SSBP05455 SMC4-214ENST00000472991 582 ntTSL 510.1□□□□□ -0.799e-17■■■■■ 55.5
SSBP05455 SMC4-213ENST00000472282 667 ntTSL 310.1□□□□□ -0.799e-17■■■■■ 55.5
SSBP05455 SMC4-212ENST00000470240 724 ntTSL 38.85□□□□□ -0.999e-17■■■■■ 55.5
SSBP05455 SMC4-219ENST00000487747 637 ntTSL 57.11□□□□□ -1.279e-17■■■■■ 55.5
SSBP05455 SMC4-227ENST00000497984 563 ntTSL 56.56□□□□□ -1.369e-17■■■■■ 55.5
SSBP05455 SMC4-208ENST00000467468 566 ntTSL 46.18□□□□□ -1.429e-17■■■■■ 55.5
SSBP05455 MIR15B-201ENST00000385045 98 ntBASIC2.64□□□□□ -1.999e-17■■■■■ 55.5
SSBP05455 RNU6ATAC-201ENST00000408749 126 ntBASIC4.41□□□□□ -1.74e-56■■■■■ 52.8
SSBP05455 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.072e-14■■■■■ 48.9
SSBP05455 LINC00240-203ENST00000606878 927 ntTSL 1 (best)18.32■□□□□ 0.522e-14■■■■■ 48
SSBP05455 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.8■■□□□ 1.242e-26■■■■■ 47.4
SSBP05455 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.19■□□□□ 0.821e-13■■■■■ 47
SSBP05455 MST1R-205ENST00000440292 810 ntTSL 315.67■□□□□ 0.11e-13■■■■■ 47
SSBP05455 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.011e-13■■■■■ 47
SSBP05455 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC14.76□□□□□ -0.051e-13■■■■■ 47
SSBP05455 MST1R-203ENST00000411578 4683 ntTSL 514□□□□□ -0.171e-13■■■■■ 47
SSBP05455 MST1R-213ENST00000612032 1065 ntTSL 1 (best) BASIC13.59□□□□□ -0.231e-13■■■■■ 47
SSBP05455 MST1R-202ENST00000344206 4198 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.421e-13■■■■■ 47
SSBP05455 MST1R-204ENST00000434765 854 ntTSL 512.4□□□□□ -0.421e-13■■■■■ 47
SSBP05455 MST1R-206ENST00000463789 558 ntTSL 212.4□□□□□ -0.421e-13■■■■■ 47
SSBP05455 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.63□□□□□ -2.832e-68■■■■■ 41.7
SSBP05455 PIEZO1-209ENST00000490756 446 ntTSL 322.6■■□□□ 1.217e-11■■■■■ 41.3
SSBP05455 LIMD1-AS1-202ENST00000429798 955 ntTSL 1 (best)11.45□□□□□ -0.585e-15■■■■■ 36.5
SSBP05455 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC14.25□□□□□ -0.133e-7■■■■■ 35.9
SSBP05455 ARFGAP1-214ENST00000520485 1548 ntTSL 225.68■■□□□ 1.71e-10■■■■■ 35.6
SSBP05455 ARFGAP1-211ENST00000519531 1490 ntTSL 320.07■□□□□ 0.81e-10■■■■■ 35.6
SSBP05455 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.621e-10■■■■■ 35.6
SSBP05455 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.83■□□□□ 0.611e-10■■■■■ 35.6
SSBP05455 ARFGAP1-215ENST00000522403 995 ntTSL 517.92■□□□□ 0.461e-10■■■■■ 35.6
SSBP05455 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.91■□□□□ 0.461e-10■■■■■ 35.6
SSBP05455 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.291e-10■■■■■ 35.6
SSBP05455 ARFGAP1-221ENST00000549047 1040 ntTSL 516.75■□□□□ 0.271e-10■■■■■ 35.6
SSBP05455 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.171e-10■■■■■ 35.6
SSBP05455 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.74■□□□□ 0.111e-10■■■■■ 35.6
SSBP05455 ARFGAP1-218ENST00000523460 572 ntTSL 415.71■□□□□ 0.111e-10■■■■■ 35.6
SSBP05455 ARFGAP1-206ENST00000518601 905 ntTSL 514.56□□□□□ -0.081e-10■■■■■ 35.6
SSBP05455 PPAN-204ENST00000444703 757 ntTSL 329.03■■■□□ 2.246e-7■■■■■ 35.5
SSBP05455 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.64■■■□□ 2.016e-7■■■■■ 35.5
SSBP05455 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.586e-7■■■■■ 35.5
SSBP05455 PPAN-207ENST00000468881 627 ntTSL 220.1■□□□□ 0.816e-7■■■■■ 35.5
SSBP05455 PPAN-206ENST00000466025 523 ntTSL 220.08■□□□□ 0.816e-7■■■■■ 35.5
SSBP05455 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.86e-7■■■■■ 35.5
SSBP05455 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.47■□□□□ 0.556e-7■■■■■ 35.5
SSBP05455 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.343e-8■■■■■ 35.4
SSBP05455 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.243e-8■■■■■ 35.4
SSBP05455 GRTP1-204ENST00000476439 877 ntTSL 221.21■□□□□ 0.993e-8■■■■■ 35.4
SSBP05455 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.21■□□□□ 0.673e-8■■■■■ 35.4
SSBP05455 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.192e-8■■■■■ 33.2
SSBP05455 PTPN23-205ENST00000495653 676 ntTSL 215.49■□□□□ 0.072e-8■■■■■ 33.2
SSBP05455 PTPN23-206ENST00000602307 5119 ntTSL 214.23□□□□□ -0.132e-8■■■■■ 33.2
SSBP05455 VTRNA1-2-201ENST00000365241 89 ntBASIC9.62□□□□□ -0.871e-323■■■■■ 32.9
SSBP05455 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.88□□□□□ -2.112e-7■■■■■ 31.9
SSBP05455 DDX39B-203ENST00000417023 561 ntTSL 514.24□□□□□ -0.135e-9■■■■■ 31.2
SSBP05455 DDX39B-210ENST00000431908 914 ntTSL 513.22□□□□□ -0.295e-9■■■■■ 31.2
SSBP05455 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.325e-9■■■■■ 31.2
SSBP05455 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.415e-9■■■■■ 31.2
SSBP05455 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC12.38□□□□□ -0.435e-9■■■■■ 31.2
SSBP05455 DDX39B-220ENST00000482195 1232 ntTSL 211.6□□□□□ -0.555e-9■■■■■ 31.2
SSBP05455 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.655e-9■■■■■ 31.2
SSBP05455 DDX39B-215ENST00000462256 4027 ntTSL 210.67□□□□□ -0.75e-9■■■■■ 31.2
SSBP05455 DDX39B-221ENST00000484566 857 ntTSL 59.6□□□□□ -0.875e-9■■■■■ 31.2
SSBP05455 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.626e-8■■■■■ 31.2
SSBP05455 HGS-212ENST00000575058 632 ntTSL 318.19■□□□□ 0.56e-8■■■■■ 31.2
SSBP05455 HGS-204ENST00000571237 878 ntTSL 318■□□□□ 0.476e-8■■■■■ 31.2
SSBP05455 AGBL5-207ENST00000453161 673 ntTSL 314.31□□□□□ -0.121e-17■■■■■ 31.2
SSBP05455 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.411e-8■■■■■ 30.7
SSBP05455 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.872e-11■■■■■ 29.9
SSBP05455 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.42■□□□□ 0.222e-11■■■■■ 29.9
SSBP05455 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.042e-11■■■■■ 29.9
SSBP05455 AC008687.1-202ENST00000604577 406 ntTSL 1 (best)15.31■□□□□ 0.041e-11■■■■■ 29.8
SSBP05455 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.031e-11■■■■■ 29.8
SSBP05455 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.74e-9■■■■■ 29.1
SSBP05455 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.357e-20■■■■■ 28.2
Retrieved 100 of 672 protein–RNA pairs in 102.9 ms