Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.36■■□□□ 1.331e-323■□□□□ 10.5
SMNDC1O75940 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.96■■□□□ 1.271e-323■□□□□ 10.5
SMNDC1O75940 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.63■■□□□ 1.211e-323■■□□□ 11.4
SMNDC1O75940 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.99■■□□□ 1.111e-323■□□□□ 9.1
SMNDC1O75940 SNHG7-202ENST00000416970 789 ntTSL 1 (best)21.06■□□□□ 0.961e-323■□□□□ 10.5
SMNDC1O75940 RPL17-201ENST00000578528 481 ntTSL 320.63■□□□□ 0.891e-323■■■■□ 23.1
SMNDC1O75940 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.52■□□□□ 0.561e-323■□□□□ 8.6
SMNDC1O75940 SNHG6-205ENST00000521399 302 ntTSL 218.35■□□□□ 0.531e-323■□□□□ 8.6
SMNDC1O75940 RPS3-213ENST00000529285 550 ntTSL 518.24■□□□□ 0.511e-323■□□□□ 10.9
SMNDC1O75940 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.19■□□□□ 0.51e-323■■■■□ 23.3
SMNDC1O75940 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.441e-323■■■■□ 23.1
SMNDC1O75940 RPL17-206ENST00000579495 914 ntTSL 217.73■□□□□ 0.431e-323■■■■□ 23.1
SMNDC1O75940 RPL17-202ENST00000578532 684 ntTSL 217.18■□□□□ 0.341e-323■■■■□ 23.1
SMNDC1O75940 RPL17-218ENST00000583637 758 ntTSL 317.18■□□□□ 0.341e-323■■■■□ 23.1
SMNDC1O75940 RPSA-203ENST00000444512 701 ntTSL 216.92■□□□□ 0.31e-323■■□□□ 12
SMNDC1O75940 SNHG6-204ENST00000521127 560 ntTSL 216.84■□□□□ 0.291e-323■□□□□ 8.6
SMNDC1O75940 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16■□□□□ 0.151e-323■■■■□ 23.3
SMNDC1O75940 RPL39-202ENST00000468844 1915 ntTSL 1 (best)15.95■□□□□ 0.141e-323■□□□□ 11.1
SMNDC1O75940 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.82■□□□□ 0.121e-323■■□□□ 12.4
SMNDC1O75940 SCARNA2-201ENST00000458748 420 ntBASIC15.75■□□□□ 0.111e-323■■■■■ 75.3
SMNDC1O75940 AL356488.2-201ENST00000602755 427 ntBASIC15.47■□□□□ 0.071e-323■■■■■ 75.3
SMNDC1O75940 METTL12-202ENST00000529868 2870 ntTSL 1 (best)15.45■□□□□ 0.061e-323■■□□□ 11.6
SMNDC1O75940 RPL17-209ENST00000580387 827 ntTSL 515.42■□□□□ 0.061e-323■■■■□ 23.1
SMNDC1O75940 RPL17-223ENST00000618613 856 ntAPPRIS P1 TSL 315.16■□□□□ 0.021e-323■■■■□ 23.1
SMNDC1O75940 RPL17-221ENST00000615760 650 ntTSL 315.14■□□□□ 0.011e-323■■■■□ 23.1
SMNDC1O75940 DANCR-202ENST00000425653 823 ntTSL 1 (best)14.84□□□□□ -0.031e-323■■□□□ 12.4
SMNDC1O75940 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.69□□□□□ -0.061e-323■□□□□ 8.6
SMNDC1O75940 RPS3-220ENST00000534555 387 ntTSL 314.39□□□□□ -0.111e-323■□□□□ 10.9
SMNDC1O75940 RPS3-206ENST00000526248 771 ntTSL 514.25□□□□□ -0.131e-323■□□□□ 10.9
SMNDC1O75940 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.131e-323■■■■□ 23.3
SMNDC1O75940 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.04□□□□□ -0.161e-323■■■□□ 18.4
SMNDC1O75940 RPL13A-211ENST00000486930 652 ntTSL 314□□□□□ -0.171e-323■□□□□ 11
SMNDC1O75940 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.35□□□□□ -0.271e-323■□□□□ 10.9
SMNDC1O75940 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.291e-323■■□□□ 11.6
SMNDC1O75940 RPL23A-209ENST00000582736 595 ntTSL 1 (best)13.2□□□□□ -0.31e-323■■■■□ 23.5
SMNDC1O75940 RPL27A-203ENST00000525981 297 ntTSL 513.19□□□□□ -0.31e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.19□□□□□ -0.31e-323■□□□□ 9.1
SMNDC1O75940 SNORA50.1-201ENST00000628590 135 ntBASIC13.1□□□□□ -0.311e-323■■■■□ 23.4
SMNDC1O75940 SNORA50C-201ENST00000408535 133 ntBASIC13.1□□□□□ -0.311e-323■■■■□ 23.4
SMNDC1O75940 RPS3-212ENST00000529173 1373 ntTSL 512.81□□□□□ -0.361e-323■□□□□ 10.9
SMNDC1O75940 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.65□□□□□ -0.381e-323■■■□□ 15.1
SMNDC1O75940 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.41e-323■□□□□ 9.1
SMNDC1O75940 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.421e-323■□□□□ 10.9
SMNDC1O75940 METTL12-201ENST00000398922 1368 ntTSL 412.19□□□□□ -0.461e-323■■□□□ 11.6
SMNDC1O75940 LARP4-208ENST00000520064 2068 ntTSL 512.15□□□□□ -0.461e-323■□□□□ 8.1
SMNDC1O75940 SNORA57-201ENST00000383870 149 ntBASIC11.69□□□□□ -0.541e-323■■□□□ 11.6
SMNDC1O75940 RPL27A-212ENST00000534599 651 ntTSL 511.68□□□□□ -0.541e-323■□□□□ 9.1
SMNDC1O75940 RPS3-216ENST00000530721 796 ntTSL 311.56□□□□□ -0.561e-323■□□□□ 10.9
SMNDC1O75940 RPS3-218ENST00000532872 737 ntTSL 311.56□□□□□ -0.561e-323■□□□□ 10.9
SMNDC1O75940 SNORA52-201ENST00000362915 134 ntBASIC11.29□□□□□ -0.61e-323■■■□□ 16.9
SMNDC1O75940 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.611e-323■□□□□ 10.9
SMNDC1O75940 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.611e-323■□□□□ 10.7
SMNDC1O75940 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC11.06□□□□□ -0.641e-323■■□□□ 11.4
SMNDC1O75940 SNHG25-201ENST00000580828 106 ntTSL 210.91□□□□□ -0.661e-323■□□□□ 9.7
SMNDC1O75940 DDX39B-204ENST00000418897 583 ntTSL 310.83□□□□□ -0.681e-323■■■□□ 18.2
SMNDC1O75940 DDX39B-213ENST00000456976 720 ntTSL 510.83□□□□□ -0.681e-323■■■□□ 18.2
SMNDC1O75940 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC10.78□□□□□ -0.681e-323■■■■□ 23.1
SMNDC1O75940 SNORD10-201ENST00000459579 142 ntBASIC10.73□□□□□ -0.691e-323■■■■□ 25.4
SMNDC1O75940 TAF1D-206ENST00000527068 1023 ntTSL 510.6□□□□□ -0.711e-323■□□□□ 8.3
SMNDC1O75940 DDX39B-205ENST00000419020 583 ntTSL 310.55□□□□□ -0.721e-323■■■□□ 18.2
SMNDC1O75940 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC10.5□□□□□ -0.731e-323■□□□□ 9.1
SMNDC1O75940 RPL17-220ENST00000615479 586 ntTSL 510.49□□□□□ -0.731e-323■■■■□ 23.1
SMNDC1O75940 RPS3-208ENST00000527273 390 ntTSL 310.46□□□□□ -0.731e-323■□□□□ 10.9
SMNDC1O75940 DDX39B-209ENST00000428450 633 ntTSL 410.43□□□□□ -0.741e-323■■■□□ 18.2
SMNDC1O75940 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.761e-323■□□□□ 10.7
SMNDC1O75940 RPS3-202ENST00000422465 903 ntTSL 210.27□□□□□ -0.771e-323■□□□□ 10.9
SMNDC1O75940 HSPA9-210ENST00000508003 582 ntTSL 210.13□□□□□ -0.791e-323■■■■□ 21.5
SMNDC1O75940 RPL17-211ENST00000581305 593 ntTSL 510.11□□□□□ -0.791e-323■■■■□ 23.1
SMNDC1O75940 CCNB1IP1-203ENST00000398160 1613 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.811e-323■□□□□ 10.7
SMNDC1O75940 ATP6V1G2-DDX39B-203ENST00000480131 552 ntAPPRIS P1 TSL 49.98□□□□□ -0.811e-323■■■□□ 18.2
SMNDC1O75940 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC9.87□□□□□ -0.831e-323■□□□□ 10.9
SMNDC1O75940 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC9.83□□□□□ -0.841e-323■□□□□ 9.1
SMNDC1O75940 CCNB1IP1-205ENST00000398169 1631 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.841e-323■□□□□ 10.7
SMNDC1O75940 TPT1-209ENST00000528619 731 ntTSL 29.74□□□□□ -0.851e-323■■□□□ 11.4
SMNDC1O75940 CCNB1IP1-216ENST00000557665 1331 ntTSL 59.51□□□□□ -0.891e-323■□□□□ 10.7
SMNDC1O75940 DDX39B-211ENST00000449757 591 ntTSL 39.38□□□□□ -0.911e-323■■■□□ 18.2
SMNDC1O75940 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.911e-323■■■■□ 23.1
SMNDC1O75940 RPL17-222ENST00000617346 795 ntTSL 59.31□□□□□ -0.921e-323■■■■□ 23.1
SMNDC1O75940 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC9.29□□□□□ -0.921e-323■■□□□ 11.4
SMNDC1O75940 RPS3-211ENST00000528847 639 ntTSL 59.17□□□□□ -0.941e-323■□□□□ 10.9
SMNDC1O75940 KIAA0907-208ENST00000482337 1135 ntTSL 1 (best)9.12□□□□□ -0.951e-323■■■□□ 18.4
SMNDC1O75940 RACK1-205ENST00000502905 643 ntTSL 39.12□□□□□ -0.951e-323■□□□□ 9.6
SMNDC1O75940 CCNB1IP1-208ENST00000553516 669 ntTSL 29.08□□□□□ -0.961e-323■□□□□ 10.7
SMNDC1O75940 RPS3-219ENST00000534440 564 ntTSL 2 BASIC9.06□□□□□ -0.961e-323■□□□□ 10.9
SMNDC1O75940 RPS3-210ENST00000528439 473 ntTSL 39.06□□□□□ -0.961e-323■□□□□ 10.9
SMNDC1O75940 RACK1-204ENST00000502890 705 ntTSL 39.01□□□□□ -0.971e-323■□□□□ 9.6
SMNDC1O75940 RPL17-207ENST00000580210 705 ntTSL 2 BASIC8.96□□□□□ -0.981e-323■■■■□ 23.1
SMNDC1O75940 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.991e-323■□□□□ 10.7
SMNDC1O75940 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.011e-323■□□□□ 10.9
SMNDC1O75940 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.031e-323■■■■□ 23.1
SMNDC1O75940 RPSA-206ENST00000477325 596 ntTSL 28.47□□□□□ -1.051e-323■■□□□ 12
SMNDC1O75940 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.081e-323■□□□□ 10.7
SMNDC1O75940 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.26□□□□□ -1.091e-323■■□□□ 11.4
SMNDC1O75940 PABPC4-218ENST00000513632 738 ntTSL 28.24□□□□□ -1.091e-323■□□□□ 9.8
SMNDC1O75940 SNORA79B-201ENST00000410557 148 ntBASIC8.23□□□□□ -1.091e-323■□□□□ 10.7
SMNDC1O75940 RPS3-207ENST00000526608 710 ntTSL 5 BASIC8.11□□□□□ -1.111e-323■□□□□ 10.9
SMNDC1O75940 SNORD83A-201ENST00000386747 95 ntBASIC8.11□□□□□ -1.111e-323■■■□□ 15.8
SMNDC1O75940 DKC1-212ENST00000492372 406 ntTSL 28.05□□□□□ -1.121e-323■■■□□ 15.6
SMNDC1O75940 SNORA55-201ENST00000364587 135 ntBASIC8.04□□□□□ -1.121e-323■□□□□ 9.8
SMNDC1O75940 TPT1-207ENST00000490277 1851 ntTSL 28.02□□□□□ -1.121e-323■■□□□ 11.4
Retrieved 100 of 11,362 protein–RNA pairs in 512.8 ms