Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.341e-68■■■■■ 93.1
SMNDC1O75940 SYCP2L-202ENST00000341041 3069 ntTSL 211.62□□□□□ -0.551e-68■■■■■ 93.1
SMNDC1O75940 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.114e-26■■■■■ 93
SMNDC1O75940 snoU2-30.2-201ENST00000362805 70 ntBASIC3.23□□□□□ -1.892e-46■■■■■ 92.7
SMNDC1O75940 SGPL1-204ENST00000486993 537 ntTSL 1 (best)18.56■□□□□ 0.565e-8■■■■■ 91
SMNDC1O75940 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.595e-8■■■■■ 91
SMNDC1O75940 RNU2-41P-201ENST00000410991 178 ntBASIC7.16□□□□□ -1.262e-23■■■■■ 86.7
SMNDC1O75940 RNU6-271P-201ENST00000363858 105 ntBASIC3.58□□□□□ -1.842e-12■■■■■ 83.9
SMNDC1O75940 PTPRT-210ENST00000617474 4521 ntTSL 515.97■□□□□ 0.154e-23■■■■■ 82.8
SMNDC1O75940 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.844e-23■■■■■ 82.8
SMNDC1O75940 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.94e-23■■■■■ 82.8
SMNDC1O75940 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.914e-23■■■■■ 82.8
SMNDC1O75940 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.954e-23■■■■■ 82.8
SMNDC1O75940 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.454e-23■■■■■ 82.8
SMNDC1O75940 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.454e-23■■■■■ 82.8
SMNDC1O75940 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.454e-23■■■■■ 82.8
SMNDC1O75940 NCAPD2-208ENST00000539714 533 ntTSL 37.03□□□□□ -1.289e-64■■■■■ 82.8
SMNDC1O75940 NCAPD2-210ENST00000541399 584 ntTSL 56.32□□□□□ -1.49e-64■■■■■ 82.8
SMNDC1O75940 SCARNA10-201ENST00000459255 330 ntBASIC4.88□□□□□ -1.639e-64■■■■■ 82.8
SMNDC1O75940 SNORD3B-1-201ENST00000577988 758 ntBASIC12.37□□□□□ -0.435e-24■■■■■ 82
SMNDC1O75940 SNORD3B-1-203ENST00000631292 217 nt9.8□□□□□ -0.845e-24■■■■■ 82
SMNDC1O75940 SNORD3B-1-202ENST00000617128 218 nt9.76□□□□□ -0.855e-24■■■■■ 82
SMNDC1O75940 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.82□□□□□ -0.23e-14■■■■■ 81.9
SMNDC1O75940 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.83e-14■■■■■ 81.9
SMNDC1O75940 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC12.16□□□□□ -0.461e-63■■■■■ 81.3
SMNDC1O75940 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.731e-63■■■■■ 81.3
SMNDC1O75940 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.991e-63■■■■■ 81.3
SMNDC1O75940 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.68□□□□□ -1.021e-63■■■■■ 81.3
SMNDC1O75940 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.82□□□□□ -1.161e-63■■■■■ 81.3
SMNDC1O75940 PUM1-214ENST00000525843 4528 ntTSL 57.55□□□□□ -1.21e-63■■■■■ 81.3
SMNDC1O75940 PUM1-211ENST00000498419 3068 ntTSL 56.83□□□□□ -1.321e-63■■■■■ 81.3
SMNDC1O75940 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.51□□□□□ -1.371e-63■■■■■ 81.3
SMNDC1O75940 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.411e-63■■■■■ 81.3
SMNDC1O75940 RNU6-378P-201ENST00000384324 107 ntBASIC4.67□□□□□ -1.663e-12■■■■■ 81.1
SMNDC1O75940 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.341e-36■■■■■ 77.7
SMNDC1O75940 NCAPD2-202ENST00000382457 2844 ntTSL 511.77□□□□□ -0.531e-36■■■■■ 77.7
SMNDC1O75940 NCAPD2-207ENST00000539084 4290 ntTSL 210.32□□□□□ -0.761e-36■■■■■ 77.7
SMNDC1O75940 MED24-231ENST00000584782 542 ntTSL 38.52□□□□□ -1.054e-33■■■■■ 75.8
SMNDC1O75940 MED24-228ENST00000581058 524 ntTSL 48.43□□□□□ -1.064e-33■■■■■ 75.8
SMNDC1O75940 SNORD124-201ENST00000459577 104 ntBASIC1.45□□□□□ -2.184e-33■■■■■ 75.8
SMNDC1O75940 RNU6-13P-201ENST00000384248 107 ntBASIC3.25□□□□□ -1.891e-69■■■■■ 75.6
SMNDC1O75940 SCARNA2-201ENST00000458748 420 ntBASIC15.75■□□□□ 0.111e-323■■■■■ 75.3
SMNDC1O75940 AL356488.2-201ENST00000602755 427 ntBASIC15.47■□□□□ 0.071e-323■■■■■ 75.3
SMNDC1O75940 RNU2-51P-201ENST00000410708 197 ntBASIC4.26□□□□□ -1.739e-22■■■■■ 74.5
SMNDC1O75940 RNU6-1141P-201ENST00000364520 107 ntBASIC4.23□□□□□ -1.731e-16■■■■■ 72.1
SMNDC1O75940 SCARNA9-201ENST00000530422 353 ntBASIC8.64□□□□□ -1.034e-61■■■■■ 72
SMNDC1O75940 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.534e-61■■■■■ 72
SMNDC1O75940 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.694e-61■■■■■ 72
SMNDC1O75940 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.42□□□□□ -1.74e-61■■■■■ 72
SMNDC1O75940 RNF149-202ENST00000424632 2010 ntTSL 220.12■□□□□ 0.818e-33■■■■■ 71.7
SMNDC1O75940 SNORD89-201ENST00000390981 114 ntBASIC1.53□□□□□ -2.168e-33■■■■■ 71.7
SMNDC1O75940 DANCR-203ENST00000441504 336 ntTSL 215.83■□□□□ 0.124e-59■■■■■ 71.2
SMNDC1O75940 MED24-225ENST00000580885 1963 ntTSL 518.15■□□□□ 0.54e-33■■■■■ 70.4
SMNDC1O75940 MED24-213ENST00000535071 2441 ntTSL 517.15■□□□□ 0.344e-33■■■■■ 70.4
SMNDC1O75940 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.174e-33■■■■■ 70.4
SMNDC1O75940 MED24-214ENST00000535508 3334 ntTSL 213.89□□□□□ -0.194e-33■■■■■ 70.4
SMNDC1O75940 MED24-201ENST00000356271 3446 ntTSL 2 BASIC13.31□□□□□ -0.284e-33■■■■■ 70.4
SMNDC1O75940 MED24-203ENST00000394127 3456 ntTSL 2 BASIC12.96□□□□□ -0.344e-33■■■■■ 70.4
SMNDC1O75940 MED24-212ENST00000501516 3037 ntTSL 5 BASIC12.81□□□□□ -0.364e-33■■■■■ 70.4
SMNDC1O75940 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC11.76□□□□□ -0.534e-33■■■■■ 70.4
SMNDC1O75940 MED24-219ENST00000578901 728 ntTSL 1 (best)7.43□□□□□ -1.224e-33■■■■■ 70.4
SMNDC1O75940 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.34□□□□□ -1.234e-33■■■■■ 70.4
SMNDC1O75940 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.67□□□□□ -1.661e-38■■■■■ 70.2
SMNDC1O75940 AC006064.5-201ENST00000541782 248 ntBASIC3.86□□□□□ -1.792e-77■■■■■ 68.8
SMNDC1O75940 SMC4-221ENST00000489573 1553 ntTSL 1 (best)19.6■□□□□ 0.732e-16■■■■■ 67.6
SMNDC1O75940 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.582e-16■■■■■ 67.6
SMNDC1O75940 SMC4-209ENST00000468653 1756 ntTSL 217.46■□□□□ 0.392e-16■■■■■ 67.6
SMNDC1O75940 SMC4-211ENST00000469858 1971 ntTSL 216.81■□□□□ 0.282e-16■■■■■ 67.6
SMNDC1O75940 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.35■□□□□ 0.212e-16■■■■■ 67.6
SMNDC1O75940 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.292e-16■■■■■ 67.6
SMNDC1O75940 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC10.97□□□□□ -0.652e-16■■■■■ 67.6
SMNDC1O75940 SMC4-219ENST00000487747 637 ntTSL 58.95□□□□□ -0.982e-16■■■■■ 67.6
SMNDC1O75940 SMC4-227ENST00000497984 563 ntTSL 58.55□□□□□ -1.042e-16■■■■■ 67.6
SMNDC1O75940 SMC4-214ENST00000472991 582 ntTSL 58.33□□□□□ -1.082e-16■■■■■ 67.6
SMNDC1O75940 SMC4-213ENST00000472282 667 ntTSL 38.32□□□□□ -1.082e-16■■■■■ 67.6
SMNDC1O75940 SMC4-212ENST00000470240 724 ntTSL 38.04□□□□□ -1.122e-16■■■■■ 67.6
SMNDC1O75940 SMC4-208ENST00000467468 566 ntTSL 47.14□□□□□ -1.272e-16■■■■■ 67.6
SMNDC1O75940 MIR15B-201ENST00000385045 98 ntBASIC3.82□□□□□ -1.82e-16■■■■■ 67.6
SMNDC1O75940 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.72■□□□□ 0.438e-27■■■■■ 67.3
SMNDC1O75940 RUVBL1-203ENST00000472125 913 ntTSL 39.63□□□□□ -0.878e-27■■■■■ 67.3
SMNDC1O75940 RUVBL1-208ENST00000585057 1113 ntTSL 39.51□□□□□ -0.898e-27■■■■■ 67.3
SMNDC1O75940 RNU2-37P-201ENST00000410695 177 ntBASIC3.7□□□□□ -1.828e-27■■■■■ 67.3
SMNDC1O75940 TIPIN-203ENST00000562124 1009 ntAPPRIS ALT2 TSL 514.26□□□□□ -0.139e-51■■■■■ 67.1
SMNDC1O75940 TIPIN-201ENST00000261881 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.729e-51■■■■■ 67.1
SMNDC1O75940 TIPIN-204ENST00000566524 1459 ntTSL 28.87□□□□□ -0.999e-51■■■■■ 67.1
SMNDC1O75940 SCARNA14-201ENST00000516903 136 ntBASIC3.36□□□□□ -1.879e-51■■■■■ 67.1
SMNDC1O75940 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.67■□□□□ 0.11e-18■■■■■ 66.9
SMNDC1O75940 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.43■□□□□ 0.061e-18■■■■■ 66.9
SMNDC1O75940 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.47□□□□□ -0.091e-18■■■■■ 66.9
SMNDC1O75940 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.77□□□□□ -0.211e-18■■■■■ 66.9
SMNDC1O75940 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.63□□□□□ -0.231e-18■■■■■ 66.9
SMNDC1O75940 PRKN-207ENST00000479615 904 ntTSL 513.54□□□□□ -0.241e-18■■■■■ 66.9
SMNDC1O75940 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.421e-18■■■■■ 66.9
SMNDC1O75940 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.42■□□□□ 0.541e-28■■■■■ 66.5
SMNDC1O75940 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.061e-28■■■■■ 66.5
SMNDC1O75940 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC11.12□□□□□ -0.631e-28■■■■■ 66.5
SMNDC1O75940 KDELR2-203ENST00000454368 2478 ntTSL 210.05□□□□□ -0.81e-28■■■■■ 66.5
SMNDC1O75940 KDELR2-205ENST00000463747 376 ntTSL 59.59□□□□□ -0.871e-28■■■■■ 66.5
SMNDC1O75940 KDELR2-202ENST00000382267 583 ntTSL 48.81□□□□□ -11e-28■■■■■ 66.5
SMNDC1O75940 KIF2C-205ENST00000455186 908 ntTSL 59.51□□□□□ -0.891e-13■■■■■ 63.4
Retrieved 100 of 11,362 protein–RNA pairs in 355 ms