Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 RBM39-210ENST00000425184 526 ntTSL 33.12□□□□□ -1.917e-7■□□□□ 9.5
SF3B1O75533 NAP1L1-224ENST00000552056 1981 ntTSL 53.07□□□□□ -1.927e-7■□□□□ 9.5
SF3B1O75533 RBM39-211ENST00000426951 840 ntTSL 1 (best)2.89□□□□□ -1.957e-7■□□□□ 9.5
SF3B1O75533 RBM39-231ENST00000477334 949 ntTSL 22.89□□□□□ -1.957e-7■□□□□ 9.5
SF3B1O75533 RBM39-242ENST00000498280 444 ntTSL 31.7□□□□□ -2.147e-7■□□□□ 9.5
SF3B1O75533 RBM39-234ENST00000487604 370 ntTSL 31.15□□□□□ -2.227e-7■□□□□ 9.5
SF3B1O75533 SMC4-203ENST00000462668 4235 ntTSL 22.78□□□□□ -1.962e-7■□□□□ 9.5
SF3B1O75533 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.1□□□□□ -0.153e-9■□□□□ 9.5
SF3B1O75533 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.873e-9■□□□□ 9.5
SF3B1O75533 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.169e-10■□□□□ 9.4
SF3B1O75533 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.549e-10■□□□□ 9.4
SF3B1O75533 WSB1-216ENST00000584114 479 ntTSL 33.64□□□□□ -1.837e-12■□□□□ 9.3
SF3B1O75533 WSB1-212ENST00000583096 834 ntTSL 33.36□□□□□ -1.877e-12■□□□□ 9.3
SF3B1O75533 OAZ1-206ENST00000589739 657 ntTSL 219.22■□□□□ 0.675e-12■□□□□ 9.2
SF3B1O75533 SNORD2-201ENST00000459163 69 ntBASIC-0.5□□□□□ -2.498e-8■□□□□ 9.2
SF3B1O75533 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC13.76□□□□□ -0.212e-75■□□□□ 9.1
SF3B1O75533 ALDOA-215ENST00000565355 538 ntTSL 516.96■□□□□ 0.31e-9■□□□□ 9.1
SF3B1O75533 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC10.23□□□□□ -0.773e-7■□□□□ 8.8
SF3B1O75533 SETD5-210ENST00000442373 900 ntTSL 59.56□□□□□ -0.883e-7■□□□□ 8.8
SF3B1O75533 SETD5-226ENST00000490791 667 ntTSL 37.11□□□□□ -1.273e-7■□□□□ 8.8
SF3B1O75533 NUP214-223ENST00000530843 189 ntTSL 52.84□□□□□ -1.962e-10■□□□□ 8.7
SF3B1O75533 HMGN1-217ENST00000489072 1014 ntTSL 327.37■■□□□ 1.974e-6■□□□□ 8.6
SF3B1O75533 HMGN1-207ENST00000436324 1045 ntTSL 220.03■□□□□ 0.84e-6■□□□□ 8.6
SF3B1O75533 HMGN1-219ENST00000491183 527 ntTSL 219.76■□□□□ 0.754e-6■□□□□ 8.6
SF3B1O75533 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.32■□□□□ 0.684e-6■□□□□ 8.6
SF3B1O75533 HMGN1-212ENST00000479586 841 ntTSL 219.32■□□□□ 0.684e-6■□□□□ 8.6
SF3B1O75533 HMGN1-206ENST00000431390 1552 ntTSL 319.27■□□□□ 0.684e-6■□□□□ 8.6
SF3B1O75533 HMGN1-209ENST00000463631 583 ntTSL 319.2■□□□□ 0.664e-6■□□□□ 8.6
SF3B1O75533 HMGN1-210ENST00000464078 508 ntTSL 519.2■□□□□ 0.664e-6■□□□□ 8.6
SF3B1O75533 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.644e-6■□□□□ 8.6
SF3B1O75533 HMGN1-214ENST00000482733 701 ntTSL 218.04■□□□□ 0.484e-6■□□□□ 8.6
SF3B1O75533 HMGN1-208ENST00000443046 823 ntTSL 316.01■□□□□ 0.154e-6■□□□□ 8.6
SF3B1O75533 HMGN1-211ENST00000471260 615 ntTSL 314.83□□□□□ -0.044e-6■□□□□ 8.6
SF3B1O75533 HMGN1-216ENST00000486741 4299 ntTSL 213.41□□□□□ -0.264e-6■□□□□ 8.6
SF3B1O75533 HMGN1-213ENST00000482192 793 ntTSL 313.02□□□□□ -0.334e-6■□□□□ 8.6
SF3B1O75533 HMGN1-220ENST00000492280 2707 ntTSL 512.67□□□□□ -0.384e-6■□□□□ 8.6
SF3B1O75533 HMGN1-215ENST00000485550 745 ntTSL 511.61□□□□□ -0.554e-6■□□□□ 8.6
SF3B1O75533 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC10.04□□□□□ -0.84e-6■□□□□ 8.6
SF3B1O75533 HMGN1-201ENST00000288344 1303 ntTSL 29.94□□□□□ -0.824e-6■□□□□ 8.6
SF3B1O75533 HMGN1-205ENST00000419378 850 ntTSL 27.53□□□□□ -1.24e-6■□□□□ 8.6
SF3B1O75533 TFRC-215ENST00000491658 396 ntTSL 52.04□□□□□ -2.081e-7■□□□□ 8.6
SF3B1O75533 RPL9-210ENST00000511643 618 ntTSL 24.44□□□□□ -1.75e-6■□□□□ 8.6
SF3B1O75533 RPL7A-203ENST00000426651 1057 ntTSL 521.8■■□□□ 1.081e-10■□□□□ 8.4
SF3B1O75533 RPL7A-209ENST00000496554 947 ntTSL 219.72■□□□□ 0.751e-10■□□□□ 8.4
SF3B1O75533 RPL7A-206ENST00000485706 743 ntTSL 213.09□□□□□ -0.311e-10■□□□□ 8.4
SF3B1O75533 SNORD24-201ENST00000383884 75 ntBASIC0.25□□□□□ -2.371e-10■□□□□ 8.4
SF3B1O75533 BHLHE40-203ENST00000467610 1366 ntTSL 219.17■□□□□ 0.665e-6■□□□□ 8.4
SF3B1O75533 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.365e-6■□□□□ 8.4
SF3B1O75533 BHLHE40-202ENST00000460806 396 ntTSL 27.53□□□□□ -1.25e-6■□□□□ 8.4
SF3B1O75533 MARCH6-213ENST00000514961 703 ntTSL 57.17□□□□□ -1.261e-8■□□□□ 8.3
SF3B1O75533 IARS-203ENST00000395554 1103 ntTSL 514.58□□□□□ -0.086e-6■□□□□ 8.3
SF3B1O75533 DKC1-212ENST00000492372 406 ntTSL 29.94□□□□□ -0.822e-6■□□□□ 8.1
SF3B1O75533 MATR3-211ENST00000505625 7306 ntTSL 1 (best)5.29□□□□□ -1.568e-6■□□□□ 8
SF3B1O75533 MATR3-202ENST00000502422 2250 ntTSL 1 (best)4.78□□□□□ -1.648e-6■□□□□ 8
SF3B1O75533 MATR3-226ENST00000515833 1001 ntTSL 53.79□□□□□ -1.88e-6■□□□□ 8
SF3B1O75533 MATR3-217ENST00000511333 558 ntTSL 51.69□□□□□ -2.148e-6■□□□□ 8
Retrieved 56 of 46,956 protein–RNA pairs in 1094.5 ms