RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
TRPS1-212ENST00000640765 MYT1Q01538 1121 aa13.99□□□□□ -0.17
TRPS1-212ENST00000640765 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
TRPS1-212ENST00000640765 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
TRPS1-212ENST00000640765 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.28
TRPS1-212ENST00000640765 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
TRPS1-212ENST00000640765 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
TRPS1-212ENST00000640765 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
TRPS1-212ENST00000640765 NEFLP07196 543 aa12.98□□□□□ -0.33
TRPS1-212ENST00000640765 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
TRPS1-212ENST00000640765 APLP2Q06481 763 aa12.84□□□□□ -0.35
TRPS1-212ENST00000640765 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
TRPS1-212ENST00000640765 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
TRPS1-212ENST00000640765 RTL5Q5HYW3 569 aaPredicted RBP12.66□□□□□ -0.38
TRPS1-212ENST00000640765 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
TRPS1-212ENST00000640765 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
TRPS1-212ENST00000640765 PCGF6Q9BYE7 350 aa12.56□□□□□ -0.4
TRPS1-212ENST00000640765 NISCHQ9Y2I1 1504 aa12.53□□□□□ -0.4
TRPS1-212ENST00000640765 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
TRPS1-212ENST00000640765 GLIPR1L2Q4G1C9 344 aa12.49□□□□□ -0.41
TRPS1-212ENST00000640765 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.44
TRPS1-212ENST00000640765 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
TRPS1-212ENST00000640765 EIF5BO60841 1220 aaKnown RBP12.2□□□□□ -0.46
TRPS1-212ENST00000640765 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
TRPS1-212ENST00000640765 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
TRPS1-212ENST00000640765 CDK11AQ9UQ88 783 aaPredicted RBP12.02□□□□□ -0.49
TRPS1-212ENST00000640765 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
TRPS1-212ENST00000640765 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
TRPS1-212ENST00000640765 HRCP23327 699 aa11.98□□□□□ -0.49
TRPS1-212ENST00000640765 ANP32AP39687 249 aaKnown RBP11.95□□□□□ -0.5
TRPS1-212ENST00000640765 TNNT2P45379 298 aaPredicted RBP11.93□□□□□ -0.5
TRPS1-212ENST00000640765 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
TRPS1-212ENST00000640765 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
TRPS1-212ENST00000640765 POLR3GLQ9BT43 218 aa11.89□□□□□ -0.51
TRPS1-212ENST00000640765 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
TRPS1-212ENST00000640765 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
TRPS1-212ENST00000640765 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
TRPS1-212ENST00000640765 GTF3C3Q9Y5Q9 886 aa11.79□□□□□ -0.52
TRPS1-212ENST00000640765 CDK11BP21127 795 aaKnown RBP11.76□□□□□ -0.53
TRPS1-212ENST00000640765 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
TRPS1-212ENST00000640765 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
TRPS1-212ENST00000640765 TRIM44Q96DX7 344 aaPredicted RBP11.72□□□□□ -0.53
TRPS1-212ENST00000640765 BCANQ96GW7 911 aa11.7□□□□□ -0.54
TRPS1-212ENST00000640765 CNGB1Q14028 1251 aaPredicted RBP11.69□□□□□ -0.54
TRPS1-212ENST00000640765 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
TRPS1-212ENST00000640765 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
TRPS1-212ENST00000640765 NCLP19338 710 aaKnown RBP11.64□□□□□ -0.55
TRPS1-212ENST00000640765 PPARGC1BQ86YN6 1023 aaKnown RBP11.63□□□□□ -0.55
TRPS1-212ENST00000640765 NEFMP07197 916 aa11.62□□□□□ -0.55
TRPS1-212ENST00000640765 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
TRPS1-212ENST00000640765 ANP32CO43423 234 aa11.6□□□□□ -0.55
TRPS1-212ENST00000640765 ITGAEP38570 1179 aa11.56□□□□□ -0.56
TRPS1-212ENST00000640765 NBR1Q14596 966 aa11.56□□□□□ -0.56
TRPS1-212ENST00000640765 ANP32EQ9BTT0 268 aa11.55□□□□□ -0.56
TRPS1-212ENST00000640765 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
TRPS1-212ENST00000640765 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
TRPS1-212ENST00000640765 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
TRPS1-212ENST00000640765 ARXQ96QS3 562 aa11.48□□□□□ -0.57
TRPS1-212ENST00000640765 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
TRPS1-212ENST00000640765 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
TRPS1-212ENST00000640765 SLC24A1O60721 1099 aa11.44□□□□□ -0.58
TRPS1-212ENST00000640765 DNTTIP2Q5QJE6 756 aaKnown RBP11.43□□□□□ -0.58
TRPS1-212ENST00000640765 NAP1L5Q96NT1 182 aaPredicted RBP11.42□□□□□ -0.58
TRPS1-212ENST00000640765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
TRPS1-212ENST00000640765 CHIC1Q5VXU3 224 aa11.39□□□□□ -0.59
TRPS1-212ENST00000640765 GOLGA6L22H0YM25 854 aa11.38□□□□□ -0.59
TRPS1-212ENST00000640765 BECN1Q14457 450 aa11.37□□□□□ -0.59
TRPS1-212ENST00000640765 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
TRPS1-212ENST00000640765 PTMAP06454 111 aaKnown RBP11.36□□□□□ -0.59
TRPS1-212ENST00000640765 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
TRPS1-212ENST00000640765 CALRP27797 417 aaKnown RBP11.34□□□□□ -0.59
TRPS1-212ENST00000640765 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
TRPS1-212ENST00000640765 CHAF1AQ13111 956 aaPredicted RBP11.33□□□□□ -0.6
TRPS1-212ENST00000640765 FKBP8Q14318 412 aa11.33□□□□□ -0.6
TRPS1-212ENST00000640765 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
TRPS1-212ENST00000640765 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
TRPS1-212ENST00000640765 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
TRPS1-212ENST00000640765 TNNT3P45378 269 aaPredicted RBP11.3□□□□□ -0.6
TRPS1-212ENST00000640765 NEUROD1Q13562 356 aa11.27□□□□□ -0.6
TRPS1-212ENST00000640765 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.6
TRPS1-212ENST00000640765 NRDCO43847 1150 aa11.26□□□□□ -0.61
TRPS1-212ENST00000640765 FAM50AQ14320 339 aaKnown RBP11.24□□□□□ -0.61
TRPS1-212ENST00000640765 PTMSP20962 102 aa11.24□□□□□ -0.61
TRPS1-212ENST00000640765 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
TRPS1-212ENST00000640765 L1TD1Q5T7N2 865 aaKnown RBP11.21□□□□□ -0.62
TRPS1-212ENST00000640765 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
TRPS1-212ENST00000640765 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
TRPS1-212ENST00000640765 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
TRPS1-212ENST00000640765 PPM1GO15355 546 aaPredicted RBP11.19□□□□□ -0.62
TRPS1-212ENST00000640765 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
TRPS1-212ENST00000640765 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
TRPS1-212ENST00000640765 HNRNPUQ00839 825 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRPS1-212ENST00000640765 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
TRPS1-212ENST00000640765 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
TRPS1-212ENST00000640765 GOLGA6L1Q8N7Z2 621 aa11.08□□□□□ -0.64
TRPS1-212ENST00000640765 NOC3LQ8WTT2 800 aaKnown RBP11.05□□□□□ -0.64
TRPS1-212ENST00000640765 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
TRPS1-212ENST00000640765 NOP58Q9Y2X3 529 aaKnown RBP11.04□□□□□ -0.64
TRPS1-212ENST00000640765 KIAA2012Q0VF49 1180 aa11.03□□□□□ -0.64
TRPS1-212ENST00000640765 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms